Cystic kidney disease

Gene: COL4A5

Red List (low evidence)

COL4A5 (collagen type IV alpha 5 chain)
EnsemblGeneIds (GRCh38): ENSG00000188153
EnsemblGeneIds (GRCh37): ENSG00000188153
OMIM: 303630, Gene2Phenotype
COL4A5 is in 6 panels

3 reviews

Aakash Joshi (St George's Hospital)

I don't know

PMCID 11121527 has identified that a proband and his mother (hemizygous) had polycystic kidney disease alongside an Alport phenotype.
PMCID 11053243 identified 3 individuals with renal cysts as children/adolescents.
PMCID 10910213 identified 3 individuals with renal cysts and a COL4A5 pathogenic variant.

I believe there have been discussion with GEL and the Bristol Lab to suggest the evidence for COL4A5 and cystic renal disease may be an association rather than causative, and it may be better to wait for further evidence rather than rely on case counting.
Created: 1 Oct 2026, 1:09 p.m. | Last Modified: 1 Oct 2026, 1:09 p.m.
Panel Version: 9.3

Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)

Phenotypes
cystic renal disease

Publications

Eleanor Williams (Genomics England Curator)

Removed 'for-review' tag as only 1 case, so red rating.
Created: 21 Jan 2021, 3:54 p.m. | Last Modified: 21 Jan 2021, 3:54 p.m.
Panel Version: 2.23
Comment on list classification: Promoting from grey to red, as there is one reported case. But noting the green review from expert reviewer John Sayer, marking this gene as 'for-review' by the GMS.
Created: 13 Jan 2021, 4:39 p.m. | Last Modified: 13 Jan 2021, 4:39 p.m.
Panel Version: 2.22
PMID: 31922066 - Gulati et al 2019 - through WES they identified 1 female patient with Thin glomerular basement membrane (TBM) disease and bilateral kidney cysts that was heterozygous for a COL4A5 likely pathogenic missense variant (c.C899T: p. P300L)
Created: 13 Jan 2021, 4:38 p.m. | Last Modified: 13 Jan 2021, 4:38 p.m.
Panel Version: 2.21

Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)

Phenotypes
cystic kidney disease MONDO:0002473

Publications

John Sayer (Newcastle University)

Green List (high evidence)

Additional publication supporting this gene with cystic kidney phenotypes
PMID: 38680391
Created: 30 Jun 2024, 10:45 a.m. | Last Modified: 30 Jun 2024, 10:45 a.m.
Panel Version: 5.8
COL4A5 may cause mild cystic kidney disease
Sources: Other
Created: 5 Jun 2020, 3:03 p.m. | Last Modified: 5 Jun 2020, 3:03 p.m.
Panel Version: 2.17

Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)

Phenotypes
cystic kidney disease

Publications

Details

Mode of Inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
Phenotypes
  • cystic kidney disease MONDO:0002473
OMIM
303630
Clinvar variants
Variants in COL4A5
Penetrance
unknown
Publications
Panels with this gene

History Filter Activity

4 Nov 2024, Gel status: 1

Set publications

Arina Puzriakova (Genomics England Curator)

Publications for gene: COL4A5 were set to 31922066

21 Jan 2021, Gel status: 1

Removed Tag

Eleanor Williams (Genomics England Curator)

Tag for-review was removed from gene: COL4A5.

13 Jan 2021, Gel status: 1

Added Tag

Eleanor Williams (Genomics England Curator)

Tag for-review tag was added to gene: COL4A5.

13 Jan 2021, Gel status: 1

Set Phenotypes

Eleanor Williams (Genomics England Curator)

Phenotypes for gene: COL4A5 were changed from cystic kidney disease to cystic kidney disease MONDO:0002473

13 Jan 2021, Gel status: 1

Entity classified by Genomics England curator

Eleanor Williams (Genomics England Curator)

Gene: col4a5 has been classified as Red List (Low Evidence).

5 Jun 2020, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance

John Sayer (Newcastle University)

gene: COL4A5 was added gene: COL4A5 was added to Cystic kidney disease. Sources: Other Mode of inheritance for gene: COL4A5 was set to X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males) Publications for gene: COL4A5 were set to 31922066 Phenotypes for gene: COL4A5 were set to cystic kidney disease Penetrance for gene: COL4A5 were set to unknown Review for gene: COL4A5 was set to GREEN