Retinal disorders
Gene: CLEC3BEnsemblGeneIds (GRCh38): ENSG00000163815
EnsemblGeneIds (GRCh37): ENSG00000163815
OMIM: 187520, Gene2Phenotype
CLEC3B is in 1 panel
2 reviews
Achchuthan Shanmugasundram (Genomics England Curator)
The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.Created: 24 Feb 2025, 5:49 p.m. | Last Modified: 24 Feb 2025, 5:49 p.m.
Panel Version: 7.8
Comment on list classification: Although the same variant was identified in all five reported families from the same village, this variant recapitulated human phenotypes in mouse model. Hence, this gene can be associated with green rating in the next GMS update.Created: 5 Oct 2024, 5:53 p.m. | Last Modified: 5 Oct 2024, 5:53 p.m.
Panel Version: 6.22
As reviewed by Dmitrijs Rots, PMID:35331648 reported the identification of the same heterozygous variant (c.539C-A/ p.Ala180Asp) in CLEC3B gene in 12 individuals from five multigenerational Japanese families from the same village presenting with maculoretinopathy.
Mice that received subretinal injections with the CLEC3B variant displayed multiple subretinal hyperreflective deposits, reduced retinal thickness, and decreased electroretinographic responses. Moreover, the optokinetic tracking response indicated that spatial frequency was significantly lower (P < .05), implying impaired visual function in these mice.
This gene has been associated with relevant phenotype in OMIM (MIM #619977), but not yet in Gene2Phenotype.Created: 5 Oct 2024, 5:46 p.m. | Last Modified: 5 Oct 2024, 5:46 p.m.
Panel Version: 6.19
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Macular dystrophy, retinal, 4, OMIM:619977
Publications
Dmitrijs Rots (Children's Clinical University Hospital)
The study described: "5 multigenerational families diagnosed with autosomal dominant maculoretinopathy were found to carry a pathogenic variant in a new gene, CLEC3B, which encodes tetranectin, a plasminogen kringle-4 binding protein. Consistent with the disease phenotypes of patients, mice that received subretinal injections with the CLEC3B variant displayed multiple subretinal hyperreflective deposits, reduced retinal thickness, and decreased electroretinographic responses. Moreover, the optokinetic tracking response indicated that spatial frequency was significantly lower (P < .05), implying impaired visual function in these mice."
Sources: LiteratureCreated: 27 Jun 2024, 12:31 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Macular dystrophy, retinal, 4
Publications
- PMID: 35331648
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- NHS GMS
- Phenotypes
-
- Macular dystrophy, retinal, 4, OMIM:619977
- OMIM
- 187520
- Clinvar variants
- Variants in CLEC3B
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q3_24_promote_green was removed from gene: CLEC3B.
Added New Source, Added New Source, Status Update
Achchuthan Shanmugasundram (Genomics England Curator)Source NHS GMS was added to CLEC3B. Source Expert Review Green was added to CLEC3B. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: clec3b has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)Phenotypes for gene: CLEC3B were changed from Macular dystrophy, retinal, 4 to Macular dystrophy, retinal, 4, OMIM:619977
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: CLEC3B were set to PMID: 35331648
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q3_24_promote_green tag was added to gene: CLEC3B.
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Dmitrijs Rots (Children's Clinical University Hospital)gene: CLEC3B was added gene: CLEC3B was added to Retinal disorders. Sources: Literature Mode of inheritance for gene: CLEC3B was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: CLEC3B were set to PMID: 35331648 Phenotypes for gene: CLEC3B were set to Macular dystrophy, retinal, 4 Review for gene: CLEC3B was set to GREEN