Retinal disorders
Gene: PCYT1AEnsemblGeneIds (GRCh38): ENSG00000161217
EnsemblGeneIds (GRCh37): ENSG00000161217
OMIM: 123695, Gene2Phenotype
PCYT1A is in 8 panels
5 reviews
Gavin Arno (UCL Institute of Ophthalmology/Moorfields Eye Hospital)
Ellen Thomas (Genomics England Curator)
Comment on list classification: Phenotypes might not be linked by clinicians so worth including on this panel.Created: 7 Jun 2016, 12:13 p.m.
Stephanie Barton (Manchester Centre for Genomic Medicine)
Not sure if patients would be referred with cone rod dystrophy or if this is a secondary finding to the Spondylometaphyseal dysplasia . We have not identified mutations in this gene in-house. Insufficient evidence to make a decision regarding the relevance of this gene.Created: 1 Jun 2016, 11:04 a.m.
Mode of inheritance
Unknown
Phenotypes
Spondylometaphyseal dysplasia with cone-rod dystrophy
Publications
- Several publications on HGMD in patients with Spondylometaphyseal dysplasia with cone-rod dystrophy
Variants in this GENE are reported as part of current diagnostic practice
Kirsty McCaffrey (Manchester Centre for Genomic Medicine)
Confirmed the name of this gene to be PCYT1A on the expert list.Created: 4 May 2016, 1:07 p.m.
Variants in this GENE are reported as part of current diagnostic practice
Ellen McDonagh (Genomics England Curator)
This gene is on the Manchester Genetic Retinal Degeneration Conditions panel (covers known genes for isolated progessive retinal degeneration, Leber congenital amaurosis, macular dystrophy, achromatopsia, congenital stationary night blindness as well as the two most common causes of syndromic blindess Usher and Bardet-Biedl syndromes and additional syndromes including Joubert, Senior-Loken, and Cohen syndrome.Created: 2 Jun 2016, 8:06 a.m.
Comment on list classification: Was PCT1A on the submitted expert list. Is this the correct HGNC-approved name for this?Created: 23 Mar 2016, 5:02 p.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- NHS GMS
- Expert Review Green
- Phenotypes
-
- Spondylometaphyseal dysplasia with cone-rod dystrophy, 608940
- OMIM
- 123695
- Clinvar variants
- Variants in PCYT1A
- Penetrance
- Complete
- Publications
-
- Several publications on HGMD in patients with Spondylometaphyseal dysplasia with cone-rod dystrophy
- Panels with this gene
History Filter Activity
Added New Source, Status Update
Ivone Leong (Genomics England Curator)Source NHS GMS was added to PCYT1A. Rating Changed from Green List (high evidence) to Green List (high evidence)
Gene classified by Genomics England curator
Ellen Thomas (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set publications
Ellen McDonagh (Genomics England Curator)Publications for PCYT1A were set to Several publications on HGMD in patients with Spondylometaphyseal dysplasia with cone-rod dystrophy
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Mode of inheritance for PCYT1A was changed to BIALLELIC, autosomal or pseudoautosomal
Created
Ellen McDonagh (Genomics England Curator)PCYT1A was created by ellenmcdonagh
Added New Source
Ellen McDonagh (Genomics England Curator)PCYT1A was added to Posterior segment abnormalitiespanel. Sources: Expert Review Green