Retinal disorders
Gene: RNU4ATACEnsemblGeneIds (GRCh38): ENSG00000264229
EnsemblGeneIds (GRCh37): ENSG00000264229
OMIM: 601428, Gene2Phenotype
RNU4ATAC is in 16 panels
3 reviews
Achchuthan Shanmugasundram (Genomics England Curator)
The rating of this gene has been updated to Green following NHS Genomic Medicine Service approval.Created: 30 Jan 2023, 2:08 p.m. | Last Modified: 30 Jan 2023, 2:08 p.m.
Panel Version: 3.26
Sarah Leigh (Genomics England Curator)
Associated with relevant phenotypes in OMIM and as definitive Gen2Phen gene for Microcephalic osteodysplastic primordial dwarfism, type I (OMIM:210710) which sometimes includes features of Lowry-Wood syndrome (OMIM:226960) and Roifman syndrome (OMIM:616651) making it relevant to this ophthalimic panel. At least six variants have been reported in at least three cases of Lowry-Wood syndrome (OMIM:226960) and at least six variants have been reported in at least three cases of Roifman syndrome (OMIM:616651).
Hannah Knight (Moorfields Eye Hospital) has also reported two further variants in a case of Lowry-Wood syndrome (OMIM:226960) where the patient shows retinal dystrophy.Created: 24 May 2022, 4:01 p.m. | Last Modified: 24 May 2022, 4:01 p.m.
Panel Version: 2.267
Comment on list classification: There is enough evidence for this gene to be rated GREEN at the next major review.Created: 24 May 2022, 3:35 p.m. | Last Modified: 24 May 2022, 3:35 p.m.
Panel Version: 2.267
Hannah Knight (Moorfields Eye Hospital)
Noted by OMIM to cause Roifman and Lowry-Wood syndrome, both of which have been associated with retinal dystrophy in the literature
Submitted to PanelApp as we have a patient with Lowry-Wood syndrome and a retinal dystrophy, where we believe we have found two pathogenic variants in RNU4ATAC
Sources: Expert Review, LiteratureCreated: 20 Jan 2022, 12:06 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Retinal dystrophy; recurrent bacterial infections; lymphadenopathy; spondyloepiphyseal dysplasia; extreme intrauterine growth retardation; facial dysmorphism; microcephaly; short stature
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- Phenotypes
-
- Lowry-Wood syndrome, OMIM:226960
- Roifman syndrome, OMIM:616651
- Tags
- OMIM
- 601428
- Clinvar variants
- Variants in RNU4ATAC
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Cytopenia - NOT Fanconi anaemia
- Primary immunodeficiency or monogenic inflammatory bowel disease
- Early onset or syndromic epilepsy
- Bleeding and platelet disorders
- Limb disorders
- DDG2P
- Intellectual disability
- Monogenic short stature
- COVID-19 research
- Neonatal diabetes
- Retinal disorders
- IUGR and IGF abnormalities
- Inherited bleeding disorders
- Fetal anomalies
- Severe microcephaly
- Skeletal dysplasia
History Filter Activity
Removed Tag, Added Tag
Sarah Leigh (Genomics England Curator)Tag locus-type-small-nucleolar was removed from gene: RNU4ATAC. Tag locus-type-rna-small-nuclear tag was added to gene: RNU4ATAC.
Added Tag
Sarah Leigh (Genomics England Curator)Tag locus-type-small-nucleolar tag was added to gene: RNU4ATAC.
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: RNU4ATAC were changed from Lowry-Wood syndrome, OMIM:226960; Microcephalic osteodysplastic primordial dwarfism, type I, OMIM:210710; Roifman syndrome, OMIM:616651 to Lowry-Wood syndrome, OMIM:226960; Roifman syndrome, OMIM:616651
Removed Tag, Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q2_22_rating was removed from gene: RNU4ATAC. Tag Q2_22_NHS_review was removed from gene: RNU4ATAC.
Added New Source, Added New Source, Status Update
Achchuthan Shanmugasundram (Genomics England Curator)Source NHS GMS was added to RNU4ATAC. Source Expert Review Green was added to RNU4ATAC. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Added Tag, Added Tag
Sarah Leigh (Genomics England Curator)Tag Q2_22_rating tag was added to gene: RNU4ATAC. Tag Q2_22_NHS_review tag was added to gene: RNU4ATAC.
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: rnu4atac has been classified as Amber List (Moderate Evidence).
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: RNU4ATAC were set to PMID: 2801768; 29265708; 30368667
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for gene: RNU4ATAC were changed from Retinal dystrophy; recurrent bacterial infections; lymphadenopathy; spondyloepiphyseal dysplasia; extreme intrauterine growth retardation; facial dysmorphism; microcephaly; short stature to Lowry-Wood syndrome, OMIM:226960; Microcephalic osteodysplastic primordial dwarfism, type I, OMIM:210710; Roifman syndrome, OMIM:616651
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance
Hannah Knight (Moorfields Eye Hospital)gene: RNU4ATAC was added gene: RNU4ATAC was added to Retinal disorders. Sources: Expert Review,Literature Mode of inheritance for gene: RNU4ATAC was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: RNU4ATAC were set to PMID: 2801768; 29265708; 30368667 Phenotypes for gene: RNU4ATAC were set to Retinal dystrophy; recurrent bacterial infections; lymphadenopathy; spondyloepiphyseal dysplasia; extreme intrauterine growth retardation; facial dysmorphism; microcephaly; short stature Penetrance for gene: RNU4ATAC were set to Complete Review for gene: RNU4ATAC was set to GREEN