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Retinal disorders

Gene: SLC37A3

Green List (high evidence)

SLC37A3 (solute carrier family 37 member 3)
EnsemblGeneIds (GRCh38): ENSG00000157800
EnsemblGeneIds (GRCh37): ENSG00000157800
SLC37A3 is in 1 panel

6 reviews

Eleanor Williams (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.
Created: 26 Sep 2024, 3:50 p.m. | Last Modified: 26 Sep 2024, 3:50 p.m.
Panel Version: 6.7

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

Comment on list classification: As reviewed by Siying Lin, there is sufficient evidence available for the promotion of this gene to green rating in the next GMS update.
Created: 17 Apr 2024, 8:26 p.m. | Last Modified: 17 Apr 2024, 8:26 p.m.
Panel Version: 4.89

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
retinitis pigmentosa, MONDO:0019200

Siying Lin (Moorfields Eye Hospital)

Green List (high evidence)

An additional 2 families (one extended Egyptian Jewish family and one British family) reported by Millo et al, homozygous for 2 additional pLOF variants in this gene
Created: 9 Mar 2024, 5:03 p.m. | Last Modified: 9 Mar 2024, 5:03 p.m.
Panel Version: 4.81

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Retinitis pigmentosa

Publications

Mode of pathogenicity
Other

Gavin Arno (UCL Institute of Ophthalmology/Moorfields Eye Hospital)

Green List (high evidence)

in carss et al 2017 as one of the biallelic LOF genes - not really enough to include. But this may be a real one
Created: 30 Aug 2019, 2:12 p.m. | Last Modified: 30 Aug 2019, 2:12 p.m.
Panel Version: 1.159

Ivone Leong (Genomics England Curator)

Comment on list classification: Promoted from red to amber. There is only one case (PMID: 28041643), therefore, there is currently not enough evidence to promote this gene to green status.
Created: 3 Apr 2019, 1:41 p.m.

Louise Daugherty (Genomics England Curator)

Red List (low evidence)

Candidate IRD-associated gene from publication PMID:28041643. Gene containing _2 predicted protein-truncating alleles (High impact), including SVs that are likely to be biallelic. Genomic coordinates refer to genome build GRCh37.
Created: 17 Jan 2017, 5:13 p.m.

Phenotypes
Retinitis pigmentosa

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Literature
Phenotypes
  • retinitis pigmentosa, MONDO:0019200
Tags
gene-checked
Clinvar variants
Variants in SLC37A3
Penetrance
Complete
Publications
Panels with this gene

History Filter Activity

2 Oct 2024, Gel status: 3

Added Tag

Arina Puzriakova (Genomics England Curator)

Tag gene-checked tag was added to gene: SLC37A3.

26 Sep 2024, Gel status: 3

Removed Tag, Removed Tag

Sarah Leigh (Genomics England Curator)

Tag Q2_24_promote_green was removed from gene: SLC37A3. Tag Q2_24_NHS_review was removed from gene: SLC37A3.

26 Sep 2024, Gel status: 3

Added New Source, Status Update

Sarah Leigh (Genomics England Curator)

Source Expert Review Green was added to SLC37A3. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

17 Apr 2024, Gel status: 2

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_24_NHS_review tag was added to gene: SLC37A3.

17 Apr 2024, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: slc37a3 has been classified as Amber List (Moderate Evidence).

17 Apr 2024, Gel status: 2

Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

Phenotypes for gene: SLC37A3 were changed from Retinitis pigmentosa; No OMIM entry to retinitis pigmentosa, MONDO:0019200

17 Apr 2024, Gel status: 2

Set publications

Achchuthan Shanmugasundram (Genomics England Curator)

Publications for gene: SLC37A3 were set to 28041643

17 Apr 2024, Gel status: 2

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_24_promote_green tag was added to gene: SLC37A3.

3 Apr 2019, Gel status: 2

Added New Source

Ivone Leong (Genomics England Curator)

Source NHS GMS was added to SLC37A3.

3 Apr 2019, Gel status: 2

Set mode of inheritance

Ivone Leong (Genomics England Curator)

Mode of inheritance for gene: SLC37A3 was changed from to BIALLELIC, autosomal or pseudoautosomal

3 Apr 2019, Gel status: 2

Entity classified by Genomics England curator

Ivone Leong (Genomics England Curator)

Gene: slc37a3 has been classified as Amber List (Moderate Evidence).

3 Apr 2019, Gel status: 1

Set Phenotypes

Ivone Leong (Genomics England Curator)

Phenotypes for gene: SLC37A3 were changed from Retinitis pigmentosa to Retinitis pigmentosa; No OMIM entry

17 Jan 2017, Gel status: 0

Added New Source

Louise Daugherty (Genomics England Curator)

SLC37A3 was added to Posterior segment abnormalitiespanel. Sources: Literature

17 Jan 2017, Gel status: 0

Created

Louise Daugherty (Genomics England Curator)

SLC37A3 was created by LouiseD