Retinal disorders
Gene: SLC37A3EnsemblGeneIds (GRCh38): ENSG00000157800
EnsemblGeneIds (GRCh37): ENSG00000157800
SLC37A3 is in 1 panel
6 reviews
Eleanor Williams (Genomics England Curator)
The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.Created: 26 Sep 2024, 3:50 p.m. | Last Modified: 26 Sep 2024, 3:50 p.m.
Panel Version: 6.7
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Achchuthan Shanmugasundram (Genomics England Curator)
Comment on list classification: As reviewed by Siying Lin, there is sufficient evidence available for the promotion of this gene to green rating in the next GMS update.Created: 17 Apr 2024, 8:26 p.m. | Last Modified: 17 Apr 2024, 8:26 p.m.
Panel Version: 4.89
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
retinitis pigmentosa, MONDO:0019200
Siying Lin (Moorfields Eye Hospital)
An additional 2 families (one extended Egyptian Jewish family and one British family) reported by Millo et al, homozygous for 2 additional pLOF variants in this geneCreated: 9 Mar 2024, 5:03 p.m. | Last Modified: 9 Mar 2024, 5:03 p.m.
Panel Version: 4.81
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Retinitis pigmentosa
Publications
Mode of pathogenicity
Other
Gavin Arno (UCL Institute of Ophthalmology/Moorfields Eye Hospital)
in carss et al 2017 as one of the biallelic LOF genes - not really enough to include. But this may be a real oneCreated: 30 Aug 2019, 2:12 p.m. | Last Modified: 30 Aug 2019, 2:12 p.m.
Panel Version: 1.159
Ivone Leong (Genomics England Curator)
Comment on list classification: Promoted from red to amber. There is only one case (PMID: 28041643), therefore, there is currently not enough evidence to promote this gene to green status.Created: 3 Apr 2019, 1:41 p.m.
Louise Daugherty (Genomics England Curator)
Candidate IRD-associated gene from publication PMID:28041643. Gene containing _2 predicted protein-truncating alleles (High impact), including SVs that are likely to be biallelic. Genomic coordinates refer to genome build GRCh37.Created: 17 Jan 2017, 5:13 p.m.
Phenotypes
Retinitis pigmentosa
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- Literature
- Phenotypes
-
- retinitis pigmentosa, MONDO:0019200
- Tags
- Clinvar variants
- Variants in SLC37A3
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Added Tag
Arina Puzriakova (Genomics England Curator)Tag gene-checked tag was added to gene: SLC37A3.
Removed Tag, Removed Tag
Sarah Leigh (Genomics England Curator)Tag Q2_24_promote_green was removed from gene: SLC37A3. Tag Q2_24_NHS_review was removed from gene: SLC37A3.
Added New Source, Status Update
Sarah Leigh (Genomics England Curator)Source Expert Review Green was added to SLC37A3. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q2_24_NHS_review tag was added to gene: SLC37A3.
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: slc37a3 has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)Phenotypes for gene: SLC37A3 were changed from Retinitis pigmentosa; No OMIM entry to retinitis pigmentosa, MONDO:0019200
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: SLC37A3 were set to 28041643
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q2_24_promote_green tag was added to gene: SLC37A3.
Added New Source
Ivone Leong (Genomics England Curator)Source NHS GMS was added to SLC37A3.
Set mode of inheritance
Ivone Leong (Genomics England Curator)Mode of inheritance for gene: SLC37A3 was changed from to BIALLELIC, autosomal or pseudoautosomal
Entity classified by Genomics England curator
Ivone Leong (Genomics England Curator)Gene: slc37a3 has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Ivone Leong (Genomics England Curator)Phenotypes for gene: SLC37A3 were changed from Retinitis pigmentosa to Retinitis pigmentosa; No OMIM entry
Added New Source
Louise Daugherty (Genomics England Curator)SLC37A3 was added to Posterior segment abnormalitiespanel. Sources: Literature
Created
Louise Daugherty (Genomics England Curator)SLC37A3 was created by LouiseD