Intellectual disability update Jan 2018
Gene: MT-ND4EnsemblGeneIds (GRCh38): ENSG00000198886
EnsemblGeneIds (GRCh37): ENSG00000198886
OMIM: 516003, Gene2Phenotype
MT-ND4 is in 8 panels
2 reviews
Helen Brittain (Genomics England Curator)
Comment when marking as ready: No clear evidence linking mitochondrial point mutations in this gene, with causation of phenotypes appropriate for inclusion on this panel.Created: 5 Mar 2018, 1:49 p.m.
12707444 reports a 67 year old man with a later onset of features than would be appropriate for this panel. The variant is the same as a reported LHON variant, therefore there is a risk of incidental findings if included. 29340697 demonstrates links between mitochondrial dysfunction (as measured by estimating mitochondrial copy number through assessing the copy number of mitochondrial genes MT-ND4 & MT-ND1) and a cohort with ID/Autism. There is no clear evidence for pathogenic variants in MT-ND4 and causation of ID on the current evidence. Considered red at present.Created: 5 Mar 2018, 1:48 p.m.
Sarah Leigh (Genomics England Curator)
Associated with phenotype in OMIM, not in G2P. At least 1 variant reported in a 67 year old man with Mitochondrial complex I deficiency and cognitive deficits (PMID 12707444). Copy number losses reported in autism spectrum disorder; intellectual disability cases (PMID 29340697).Created: 28 Feb 2018, 12:23 p.m.
Details
- Mode of Inheritance
- MITOCHONDRIAL
- Sources
-
- Expert Review Red
- BRIDGE study SPEED NEURO Tier1 Gene
- Phenotypes
-
- Mitochondrial complex I deficiency
- autism spectrum disorder
- intellectual disability
- Tags
- OMIM
- 516003
- Clinvar variants
- Variants in MT-ND4
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Gene classified by Genomics England curator
Helen Brittain (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Gene classified by Genomics England curator
Helen Brittain (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for MT-ND4 were set to Mitochondrial complex I deficiency; autism spectrum disorder; intellectual disability
Set publications
Sarah Leigh (Genomics England Curator)Publications for MT-ND4 were set to 29340697; 12707444
Set publications
Sarah Leigh (Genomics England Curator)Publications for MT-ND4 were set to 29340697
Set mode of inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for MT-ND4 was changed from to MITOCHONDRIAL
Added New Source
Ellen McDonagh (Genomics England Curator)MT-ND4 was added to Intellectual disability update Jan 2018 panel. Sources: BRIDGE study SPEED NEURO Tier1 Gene,Expert Review Amber
Created
Ellen McDonagh (Genomics England Curator)MT-ND4 was created by Ellen McDonagh