Genes in panel

Ataxia and cerebellar anomalies - narrow panel

Gene: PTRH2

Amber List (moderate evidence)

PTRH2 (peptidyl-tRNA hydrolase 2)
EnsemblGeneIds (GRCh38): ENSG00000141378
EnsemblGeneIds (GRCh37): ENSG00000141378
OMIM: 608625, Gene2Phenotype
PTRH2 is in 8 panels

3 reviews

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

Comment on list classification: There are at least five unrelated families with IMNEPD presented with ataxia as part of the phenotype. Hence, there is sufficient evidence available for the promotion of this gene to green rating in the next GMS update.
Created: 24 Oct 2025, 5:11 p.m. | Last Modified: 24 Oct 2025, 5:11 p.m.
Panel Version: 8.30
PMID:25574476 (2014) reported a consanguineous family of Yazidian-Turkish descent infantile-onset multisystem neurologic, endocrine, and pancreatic disease (IMNEPD). The two affected children presented with intellectual disability, postnatal microcephaly, growth retardation, progressive ataxia, distal muscle weakness, peripheral demyelinating sensorimotor neuropathy, sensorineural deafness, exocrine pancreas insufficiency, hypothyroidism, and show signs of liver fibrosis. They were identified with a homozygous frameshift variant in PTRH2 gene.

PMID:25558065 (2015) reported a patient with global developmental delay, hearing loss, and ataxia and was identified with a homozygous missense variant PTRH2 gene.

PMID:27129381 (2016) reported the identification of a different homozygous missense variant in five further IMNEPD patients from two different families of Tunisian and Saudi Arabian descent. Ataxia was present in the Tunisian patient and in three of four Saudi Arabian patients.

PMID:31057140 (2019) reported three brothers of Syrian descent with a novel homozygous stop-gain variant in PTRH2 gene presenting with IMNEPD. All three of them had ataxia.

This gene has been associated with IMNEPD in OMIM (MIM #616263, OMIM accessed on 24 October 2025), which includes ataxia as one of the clinical manifestations present in most patients. This gene is also associated with a green rating on Ataxia - paediatric panel of PanelApp Australia (https://panelapp-aus.org/panels/271/gene/PTRH2/)
Created: 24 Oct 2025, 5:07 p.m. | Last Modified: 24 Oct 2025, 5:07 p.m.
Panel Version: 8.27

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Infantile-onset multisystem neurologic, endocrine, and pancreatic disease, OMIM:616263; neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 1, MONDO:8000012

Publications

Louise Daugherty (Genomics England Curator)

Green List (high evidence)

New gene suggested by Genomics England clinical team memeber- unable to do a full curational review (Green rating recommended) as we are waiting for new PanelApp features before this gene can be added to this GMS panel.
Created: 22 Jan 2020, 11:46 a.m. | Last Modified: 22 Jan 2020, 11:46 a.m.
Panel Version: 2.0

Ellen Thomas (Genomics England Curator)

Green List (high evidence)

Currently on adult ataxia panel; more suitable for childhood onset panel
Sources: Other
Created: 12 Dec 2019, 10:02 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Infantile-onset multisystem neurologic, endocrine, and pancreatic disease

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
Phenotypes
  • Infantile-onset multisystem neurologic, endocrine, and pancreatic disease, OMIM:616263
  • neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 1, MONDO:8000012
Tags
Q3_25_promote_green
OMIM
608625
Clinvar variants
Variants in PTRH2
Penetrance
None
Publications
Panels with this gene

History Filter Activity

24 Oct 2025, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: ptrh2 has been classified as Amber List (Moderate Evidence).

24 Oct 2025, Gel status: 0

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q3_25_promote_green tag was added to gene: PTRH2.

24 Oct 2025, Gel status: 0

Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

Phenotypes for gene: PTRH2 were changed from Infantile-onset multisystem neurologic, endocrine, and pancreatic disease to Infantile-onset multisystem neurologic, endocrine, and pancreatic disease, OMIM:616263; neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 1, MONDO:8000012

24 Oct 2025, Gel status: 0

Set publications

Achchuthan Shanmugasundram (Genomics England Curator)

Publications for gene: PTRH2 were set to 25574476; 28328138

12 Dec 2019, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Ellen Thomas (Genomics England Curator)

gene: PTRH2 was added gene: PTRH2 was added to Ataxia and cerebellar anomalies - narrow panel. Sources: Other Mode of inheritance for gene: PTRH2 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: PTRH2 were set to 25574476; 28328138 Phenotypes for gene: PTRH2 were set to Infantile-onset multisystem neurologic, endocrine, and pancreatic disease