Familial cerebral small vessel disease
Gene: TREX1EnsemblGeneIds (GRCh38): ENSG00000213689
EnsemblGeneIds (GRCh37): ENSG00000213689
OMIM: 606609, Gene2Phenotype
TREX1 is in 21 panels
2 reviews
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Associated with phenotype in G2P. 3 variants reported in this phenotypeCreated: 4 Jul 2016, 2:44 p.m.
Comment on list classification: Tier 1 gene for Cerebral Small Vessel Disorders in BRIDGE StudyCreated: 4 Jul 2016, 2:43 p.m.
Rhea Tan (University of Cambridge)
Retinal Vasculopathy with Cerebral Leukodystrophy (RVCL) is an autosomal dominant form of cerebral small vessel disease, previously described as different overlapping syndromes: cerebroretinal vasculopathy (CRV), hereditary endothelopathy, retinopathy, nephropathy and stroke (HERNS) and hereditary vascular retinopathy (HVR).
Frameshift mutations in the carboxyl-terminus of the TREX1 gene have been reported to cause RVCL. These mutations lead to a truncated C-terminus of DNAse III, leading to cellular mislocalization (rather than loss of activity) of the enzyme.
Loss-of-function mutations in TREX1 which decrease DNAse III enzyme activity have also been reported to be associated with the disease.
Created: 22 Jun 2016, 3:25 p.m.
Cerebral small vessel disease; Aicardi-Goutières syndrome; retinal vasculopathy with cerebral leukodystrophy; cerebroretinal vasculopathy; hereditary endotheliopathy, retinopathy, nephropathy and stroke; stroke, hereditary vascular retinopathy; retinopathy; nephropathyCreated: 22 Jun 2016, 3:25 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
retinal vasculopathy with cerebral leukodystrophy; cerebroretinal vasculopathy; hereditary endotheliopathy, retinopathy, nephropathy and stroke; stroke, hereditary vascular retinopathy; retinopathy; nephropathy
Publications
Details
- Mode of Inheritance
- BOTH monoallelic and biallelic, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Expert list
- UKGTN
- Radboud University Medical Center, Nijmegen
- Illumina TruGenome Clinical Sequencing Services
- Phenotypes
-
- retinal vasculopathy with cerebral leukodystrophy
- cerebroretinal vasculopathy
- hereditary endotheliopathy, retinopathy, nephropathy and stroke
- stroke, hereditary vascular retinopathy
- retinopathy
- nephropathy
- Aicardi-Goutieres syndrome 1, dominant and recessive 225750 AR, AD
- Vasculopathy, retinal, with cerebral leukodystrophy 192315 AD
- OMIM
- 606609
- Clinvar variants
- Variants in TREX1
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Childhood onset dystonia, chorea or related movement disorder
- White matter disorders and cerebral calcification - narrow panel
- Rare genetic inflammatory skin disorders
- Adult onset dystonia, chorea or related movement disorder
- Primary immunodeficiency or monogenic inflammatory bowel disease
- Early onset or syndromic epilepsy
- DDG2P
- Intracerebral calcification disorders
- Intellectual disability
- Adult onset leukodystrophy
- Inherited white matter disorders
- COVID-19 research
- Adult onset neurodegenerative disorder
- Retinal disorders
- Likely inborn error of metabolism
- Early onset dystonia
- Juvenile dermatomyositis
- Paediatric or syndromic cardiomyopathy
- Fetal anomalies
- Familial cerebral small vessel disease
- Undiagnosed metabolic disorders
History Filter Activity
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for TREX1 were set to retinal vasculopathy with cerebral leukodystrophy; cerebroretinal vasculopathy; hereditary endotheliopathy, retinopathy, nephropathy and stroke; stroke, hereditary vascular retinopathy; retinopathy; nephropathy; Aicardi-Goutieres syndrome 1, dominant and recessive 225750 AR, AD; Vasculopathy, retinal, with cerebral leukodystrophy 192315 AD
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for TREX1 were set to retinal vasculopathy with cerebral leukodystrophy; cerebroretinal vasculopathy; hereditary endotheliopathy, retinopathy, nephropathy and stroke; stroke, hereditary vascular retinopathy; retinopathy; nephropathy; Aicardi-Goutieres syndrome 1, dominant and recessive 225750 AR, AD; Vasculopathy, retinal, with cerebral leukodystrophy 192315 AD
Set Mode of Inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for TREX1 was changed to BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Set publications
Sarah Leigh (Genomics England Curator)Publications for TREX1 were set to 18204807; 12525718; 17660820; 23881107; 16845398
Upload gene information
Sarah Leigh (Genomics England Curator)TREX1 was added to Familial cerebral small vessel diseasepanel. Sources: Expert list,Illumina TruGenome Clinical Sequencing Services,Radboud University Medical Center, Nijmegen,UKGTN
Added New Source
Rhea Tan (University of Cambridge)TREX1 was added to Familial cerebral small vessel diseasepanel. Sources: Literature
Created
Rhea Tan (University of Cambridge)TREX1 was created by rheatan