Familial melanoma

Gene: CHEK2

Amber List (moderate evidence)

CHEK2 (checkpoint kinase 2)
EnsemblGeneIds (GRCh38): ENSG00000183765
EnsemblGeneIds (GRCh37): ENSG00000183765
OMIM: 604373, Gene2Phenotype
CHEK2 is in 10 panels

2 reviews

Ida Ertmanska (Genomics England Curator)

I don't know

Comment on list classification: While there is emerging evidence for association of CHEK2 variants with risk of melanoma (e.g., PMID: 42177185), there are several studies that did not find a significant association. Hence, this gene can only be rated Amber with the current evidence.
Created: 17 Jun 2026, 3:17 p.m. | Last Modified: 17 Jun 2026, 3:17 p.m.
Panel Version: 2.10
PMID: 32531112 Bui, LeBoeuf, & Nambudiri 2021
"For melanoma, one study has demonstrated a statistically significant twofold risk of melanoma in individuals with CHEK2 mutations, particularly the CHEK2*1100delC variant. Five other studies did not show an association."

PMID: 40283643 Terai et al. 2025
Cohort of patients with Metastatic Uveal Melanoma. Study reported ten patients with CHEK2 variants among 740 metastatic UM patients (1.4%) and four primary UM patients with CHEK2 germline mutations. Authors summarise that the role of CHEK2 in melanoma is not clear, but definitely warrants further investigation.
Created: 17 Jun 2026, 3:14 p.m. | Last Modified: 17 Jun 2026, 3:14 p.m.
Panel Version: 2.5

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
Tumor predisposition syndrome 4, breast/prostate/colorectal, OMIM:609265

Publications

Riyaad Aungraheeta (Bristol Genetics Laboratory)

I don't know

The CHEK2 c.1100delC variant was enriched in this retrospective cohort of mucosal melanoma patients compared to population controls (OR 6.7; 95% CI 1.8–17.5).
Sources: Literature
Created: 28 May 2026, 4:36 p.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown

Phenotypes
Mucosal melanoma

Publications

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
Phenotypes
  • Tumor predisposition syndrome 4, breast/prostate/colorectal, OMIM:609265
  • mucosal melanoma, MONDO:0000544
  • uveal melanoma, MONDO:0006486
OMIM
604373
Clinvar variants
Variants in CHEK2
Penetrance
None
Publications
Panels with this gene

History Filter Activity

17 Jun 2026, Gel status: 2

Entity classified by Genomics England curator

Ida Ertmanska (Genomics England Curator)

Gene: chek2 has been classified as Amber List (Moderate Evidence).

17 Jun 2026, Gel status: 0

Set Phenotypes

Ida Ertmanska (Genomics England Curator)

Phenotypes for gene: CHEK2 were changed from Tumor predisposition syndrome 4, breast/prostate/colorectal, OMIM:609265 to Tumor predisposition syndrome 4, breast/prostate/colorectal, OMIM:609265; mucosal melanoma, MONDO:0000544; uveal melanoma, MONDO:0006486

17 Jun 2026, Gel status: 0

Set Phenotypes

Ida Ertmanska (Genomics England Curator)

Phenotypes for gene: CHEK2 were changed from Mucosal melanoma to Tumor predisposition syndrome 4, breast/prostate/colorectal, OMIM:609265

17 Jun 2026, Gel status: 0

Set publications

Ida Ertmanska (Genomics England Curator)

Publications for gene: CHEK2 were set to PMID: 42177185

17 Jun 2026, Gel status: 0

Set mode of inheritance

Ida Ertmanska (Genomics England Curator)

Mode of inheritance for gene: CHEK2 was changed from MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

28 May 2026, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Riyaad Aungraheeta (Bristol Genetics Laboratory)

gene: CHEK2 was added gene: CHEK2 was added to Familial melanoma. Sources: Literature Mode of inheritance for gene: CHEK2 was set to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown Publications for gene: CHEK2 were set to PMID: 42177185 Phenotypes for gene: CHEK2 were set to Mucosal melanoma Review for gene: CHEK2 was set to AMBER