Thoracic aortic aneurysm or dissection (GMS)

Gene: SECISBP2

Green List (high evidence)

SECISBP2 (SECIS binding protein 2)
EnsemblGeneIds (GRCh38): ENSG00000187742
EnsemblGeneIds (GRCh37): ENSG00000187742
OMIM: 607693, Gene2Phenotype
SECISBP2 is in 6 panels

2 reviews

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green and the mode of inheritance set to BIALLELIC, autosomal or pseudoautosomal following NHS Genomic Medicine Service approval.
Created: 4 Dec 2024, 9:45 p.m. | Last Modified: 4 Dec 2024, 9:45 p.m.
Panel Version: 3.19
Comment on list classification: There is sufficient evidence available (four unrelated cases and animal models) for the promotion of this gene to green rating in the next GMS review.
Created: 10 Apr 2024, 5:56 p.m. | Last Modified: 10 Apr 2024, 5:56 p.m.
Panel Version: 3.11
PMID:38042913 reported the identification of four unrelated individuals with biallelic SECISBP2 variants and showed early-onset, progressive, aneurysmal dilatation of the ascending aorta due to cystic medial necrosis. In addition, zebrafish and mice with global or vascular smooth muscle cell (VSMC)-targeted disruption of Secisbp2 respectively showed similar aortopathy.
Created: 10 Apr 2024, 5:51 p.m. | Last Modified: 10 Apr 2024, 5:51 p.m.
Panel Version: 3.8

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Thyroid hormone metabolism, abnormal, 1, OMIM:609698

Publications

krishna chatterjee (Institute of Metabolic Science, University of Cambridge)

Green List (high evidence)

Biallelic defects in this gene cause a multi system disorder with deficiency of most human selenoproteins. Phenotypes listed here are associated with a biochemical signature of elevated circulating T4 (thyroxine) and low plasma selenium.

Since some pathogenic variants can be in non-coding regions and cryptic, we suggest a high index of suspicion even in cases of aortic aneurysm with an apparently monoallelic SECISBP2 defect. In such cases, we advocate measuring circulating T4 and selenium; if these biomarker levels are abnormal a cryptic mutation on the other allele should be sought.
Sources: Literature
Created: 28 Mar 2024, 6:06 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Growth retardation; sensorineural hearing loss; muscular dystrophy; thoracic aortic aneurysm; raised circulating thyroxine and low plasma selenium

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Thyroid hormone metabolism, abnormal, 1, OMIM:609698
  • thoracic aortic aneurysm
OMIM
607693
Clinvar variants
Variants in SECISBP2
Penetrance
Complete
Publications
Panels with this gene

History Filter Activity

4 Dec 2024, Gel status: 3

Removed Tag, Removed Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_24_promote_green was removed from gene: SECISBP2. Tag Q2_24_NHS_review was removed from gene: SECISBP2.

4 Dec 2024, Gel status: 3

Added New Source, Added New Source, Status Update

Achchuthan Shanmugasundram (Genomics England Curator)

Source NHS GMS was added to SECISBP2. Source Expert Review Green was added to SECISBP2. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

10 Apr 2024, Gel status: 2

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_24_NHS_review tag was added to gene: SECISBP2.

10 Apr 2024, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: secisbp2 has been classified as Amber List (Moderate Evidence).

10 Apr 2024, Gel status: 0

Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

Phenotypes for gene: SECISBP2 were changed from Growth retardation; sensorineural hearing loss; muscular dystrophy; thoracic aortic aneurysm; raised circulating thyroxine and low plasma selenium to Thyroid hormone metabolism, abnormal, 1, OMIM:609698; thoracic aortic aneurysm

10 Apr 2024, Gel status: 0

Set publications

Achchuthan Shanmugasundram (Genomics England Curator)

Publications for gene: SECISBP2 were set to PMID 38042913; PMID 21084748

10 Apr 2024, Gel status: 0

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_24_promote_green tag was added to gene: SECISBP2.

28 Mar 2024, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance

krishna chatterjee (Institute of Metabolic Science, University of Cambridge)

gene: SECISBP2 was added gene: SECISBP2 was added to Thoracic aortic aneurysm or dissection (GMS). Sources: Literature Mode of inheritance for gene: SECISBP2 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: SECISBP2 were set to PMID 38042913; PMID 21084748 Phenotypes for gene: SECISBP2 were set to Growth retardation; sensorineural hearing loss; muscular dystrophy; thoracic aortic aneurysm; raised circulating thyroxine and low plasma selenium Penetrance for gene: SECISBP2 were set to Complete Review for gene: SECISBP2 was set to GREEN