Clefting
Gene: PGM1EnsemblGeneIds (GRCh38): ENSG00000079739
EnsemblGeneIds (GRCh37): ENSG00000079739
OMIM: 171900, Gene2Phenotype
PGM1 is in 12 panels
2 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated to green and the mode of inheritance updated to BIALLELIC, autosomal or pseudoautosomal following NHS Genomic Medicine Service approval.Created: 2 May 2024, noon | Last Modified: 2 May 2024, noon
Panel Version: 5.3
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Achchuthan Shanmugasundram (Genomics England Curator)
Comment on list classification: There is sufficient evidence (>10 unrelated cases) for this gene to be rated green at the next GMS review.Created: 19 Jun 2023, 6:31 p.m. | Last Modified: 19 Jun 2023, 6:31 p.m.
Panel Version: 4.39
PMID:24499211 - 19 patients from 16 families with biallelic variants in PGM1 and presenting with CGG1T. Of these, 16 patients from 13 different families had cleft palate and/ or bifid uvula.
DECIPHER database - Only one patient reported with compound heterozygous variant in PGM1 gene and this patient had cleft palate (PMID:37010288)
OMIM associated autosomal recessive PGM1 variants to congenital disorder of glycosylation, type It (MIM #14921) and cleft palate and bifid uvula have been recorded as clinical presentations of this disorder.Created: 19 Jun 2023, 6:26 p.m. | Last Modified: 19 Jun 2023, 6:28 p.m.
Panel Version: 4.35
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Congenital disorder of glycosylation, type It, OMIM:14921
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- NHS GMS
- Expert Review Green
- Victorian Clinical Genetics Services
- Phenotypes
-
- Congenital disorder of glycosylation, type It, OMIM:14921
- OMIM
- 171900
- Clinvar variants
- Variants in PGM1
- Penetrance
- None
- Publications
- Panels with this gene
-
- Ketotic hypoglycaemia
- Glycogen storage disease
- Fetal anomalies
- Undiagnosed metabolic disorders
- Clefting
- Congenital disorders of glycosylation
- Childhood onset dystonia, chorea or related movement disorder
- Rhabdomyolysis and metabolic muscle disorders
- Likely inborn error of metabolism
- Acute rhabdomyolysis
- DDG2P
- Intellectual disability
History Filter Activity
Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q3_23_promote_green was removed from gene: PGM1.
Added New Source, Added New Source, Status Update
Achchuthan Shanmugasundram (Genomics England Curator)Source Expert Review Green was added to PGM1. Source NHS GMS was added to PGM1. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: pgm1 has been classified as Amber List (Moderate Evidence).
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q3_23_promote_green tag was added to gene: PGM1.
Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)Phenotypes for gene: PGM1 were changed from Cleft palate to Congenital disorder of glycosylation, type It, OMIM:14921
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: PGM1 were set to 24499211; 37010288
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: PGM1 were set to
Set mode of inheritance
Achchuthan Shanmugasundram (Genomics England Curator)Mode of inheritance for gene: PGM1 was changed from to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Ellen McDonagh (Genomics England Curator)PGM1 was added to Clefting panel. Sources: Victorian Clinical Genetics Services
Created
Ellen McDonagh (Genomics England Curator)PGM1 was created by Ellen McDonagh