Monogenic hearing loss
Gene: CHD7EnsemblGeneIds (GRCh38): ENSG00000171316
EnsemblGeneIds (GRCh37): ENSG00000171316
OMIM: 608892, Gene2Phenotype
CHD7 is in 23 panels
3 reviews
Jun Shen (Harvard Medical School)
Inheritance:Created: 7 Feb 2016, 5:58 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
#214800:CHARGE syndrome[Postnatal growth retardation; Microcephaly; Square faceMalar flatteningMicrognathiaFacial asymmetry; Small earsLop earsCup-shaped earsDeafness (sensorineural or mixed sensorineural and conductive)Mondini defectHypoplastic semicircular canals; Colobomas (iris, choroid, retina, disc, and optic nerve)AnophthalmiaMicrophthalmiaPtosisHypertelorismDownslanting palpebral fissures; Posterior choanal atresia (membranous and/or bony)Anosmia; Cleft palateCleft lip; Tetralogy of FallotAtrial septal defectVentricular septal defectDouble-outlet right ventriclePatent ductus arteriosusPulmonary valve stenosis; Rib anomalies; Umbilical herniaOmphalocele; Tracheoesophageal fistulaEsophageal atresiaDuodenal atresiaAnal atresiaAnal stenosisPoor feedingChewing/swallowing difficulties; Delayed pubertal development; Micropenis; Hypoplastic labia; Cryptorchidism; Horseshoe kidneyHydronephrosis; Monodactyly (some)Ulnar hypoplasia (some)Tibial aplasia (some)Bifid femur (some)Radial aplasia (reported in 1 patient); Mental retardation, variable severityIntellectual function may be high in milder casesBalance disturbances; Facial palsyDysphagiaCranial nerve anomalies; Autistic features; Growth hormone deficiencyParathyroid hypoplasiaGonadotropin deficiencyHypothyroidism; Thymic hypoplasia or aplasiaT cell defect, mild to severeLymphopeniaHumoral defect (in some); Hypocalcemia]; #612370:Hypogonadotropic hypogonadism 5 with or without anosmia]
Damian Smedley (Genomics England Curator)
Comment on list classification: Good evidence from OMIM and expertCreated: 1 Feb 2016, 4:52 p.m.
Maria Bitner-Glindzicz (UCL)
Good evidence for causing CHARGE syndrome and the diagnosis could be missed early on and is very variable so put on green list.Created: 19 Oct 2015, 6:20 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Expert
- Emory Genetics Laboratory
- Phenotypes
-
- hearing loss
- #214800:CHARGE syndrome
- #612370:Hypogonadotropic hypogonadism 5 with or without anosmia
- OMIM
- 608892
- Clinvar variants
- Variants in CHD7
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Fetal anomalies
- VACTERL-like phenotypes
- CAKUT
- Rare syndromic craniosynostosis or isolated multisuture synostosis
- Deafness and congenital structural abnormalities
- Unexplained kidney failure in young people
- Hypogonadotropic hypogonadism (GMS)
- COVID-19 research
- Clefting
- Primary immunodeficiency or monogenic inflammatory bowel disease
- Ocular coloboma
- Structural eye disease
- Differences in sex development
- Monogenic short stature
- Choanal atresia
- Hypogonadotropic hypogonadism
- IUGR and IGF abnormalities
- Intellectual disability
- Unexplained young onset end-stage renal disease - additional genes
- Primary lymphoedema
- Monogenic hearing loss
- DDG2P
- Pituitary hormone deficiency
History Filter Activity
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Phenotypes
Ellen McDonagh (Genomics England Curator)Phenotypes for CHD7 were set to hearing loss; #214800:CHARGE syndrome; #612370:Hypogonadotropic hypogonadism 5 with or without anosmia
Set publications
Ellen McDonagh (Genomics England Curator)Publications for CHD7 were set to PMID:10718198; 15300250; 16155193; 16169932; 16207732; 16400610; 16763960; 17334995; 17436250; 17661815; 17937444; 18074359; 18472328; 18834967; 18978652; 19279158; 20016488; 20130577; 20453063; 20591827; 21532573; 21554267; 23883829; 24728844; 25119037
Set Mode of Inheritance
Damian Smedley (Genomics England Curator)Mode of inheritance for CHD7 was changed to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Gene classified by Genomics England curator
Damian Smedley (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Added New Source
Ellen McDonagh (Genomics England Curator)CHD7 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: Emory Genetics Laboratory,Expert
Added New Source
Ellen McDonagh (Genomics England Curator)CHD7 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: Emory Genetics Laboratory,Expert