Monogenic hearing loss
Gene: COL9A2EnsemblGeneIds (GRCh38): ENSG00000049089
EnsemblGeneIds (GRCh37): ENSG00000049089
OMIM: 120260, Gene2Phenotype
COL9A2 is in 15 panels
2 reviews
Eleanor Williams (Genomics England Curator)
The rating of this gene has been updated following NHS Genomic Medicine Service approval.Created: 3 Mar 2022, 1:19 p.m. | Last Modified: 3 Mar 2022, 1:19 p.m.
Panel Version: 2.221
Comment on mode of inheritance: 3 reported cases are all homozygousCreated: 20 Sep 2020, 7:16 a.m. | Last Modified: 20 Sep 2020, 7:16 a.m.
Panel Version: 2.79
Comment on list classification: Changing rating from red to amber, but sufficient cases to rate green following GMS review of appropriateness of this gene for a non-syndromic hearing loss panel.Created: 20 Sep 2020, 7:15 a.m. | Last Modified: 20 Sep 2020, 7:15 a.m.
Panel Version: 2.78
Provisional association with ?Stickler syndrome, type V #614284 (AR) in OMIM.
PMID: 21671392 - Baker et al 2011 - describe a 5 generation consanguineous of Asian indian origin with autosomal recessive Stickler syndrome. The initial 9 year old proband has severe myopia, vitreous abnormalities, and severe lattice degeneration, and was found to have mild to moderate sensorineural hearing loss in a school-age hearing screen. A second child (18 months), failed his newborn hearing screen and has mild to moderate sensorineural hearing loss. He has also been diagnosed with high myopia. COL9A1, COL9A2, and COL9A3 were screened for variants. A homozygous c.843_c.846 + 4del8 in the COL9A2 gene was detected in both children.
PMID: 31090205 - Nixon et al 2019 - report 2 families with consanguineous parents, with children with Stickler syndrome and homozygous variants in COL9A2. The three probands show sensorineural hearing loss (SNHL) and high myopia.Created: 20 Sep 2020, 7:14 a.m. | Last Modified: 20 Sep 2020, 7:14 a.m.
Panel Version: 2.77
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
?Stickler syndrome, type V, 614284
Publications
Jun Shen (Harvard Medical School)
Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Phenotypes
#600204:Epiphyseal dysplasia, multiple, 2[Short stature, mild; Flattened, irregular epiphysesVarus/valgus knee deformityKnee osteoarthritis; Mildly short hands]; #603932:{Intervertebral disc disease, susceptibility to}; #614284:?Stickler syndrome, type V[Short stature in childhoodAdult height, average; Hearing loss, sensorineural, mild to moderate; High myopiaVitreoretinal degenerationRetinal detachment]
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Expert
- Radboud University Medical Center, Nijmegen
- Phenotypes
-
- Stickler syndrome, type V, OMIM:614284
- OMIM
- 120260
- Clinvar variants
- Variants in COL9A2
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Thoracic aortic aneurysm or dissection (GMS)
- DDG2P
- Intellectual disability
- Stickler syndrome
- Osteogenesis imperfecta
- Clefting
- Retinal disorders
- Multiple Epiphyseal Dysplasia
- Thoracic aortic aneurysm or dissection
- Structural eye disease
- Monogenic hearing loss
- Ehlers Danlos syndrome with a likely monogenic cause
- Fetal anomalies
- Glaucoma (developmental)
- Skeletal dysplasia
History Filter Activity
Removed Tag
Eleanor Williams (Genomics England Curator)Tag for-review was removed from gene: COL9A2.
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source Expert Review Green was added to COL9A2. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: COL9A2 were changed from ?Stickler syndrome, type V, 614284 to Stickler syndrome, type V, OMIM:614284
Added Tag
Eleanor Williams (Genomics England Curator)Tag for-review tag was added to gene: COL9A2.
Set Phenotypes
Eleanor Williams (Genomics England Curator)Phenotypes for gene: COL9A2 were changed from Epiphyseal dysplasia, multiple, 2, 600204{Intervertebral disc disease, susceptibility to}, 603932Stickler syndrome, type V, 614284; Epiphysealdysplasia,multiple,2,600204{Intervertebraldiscdisease,susceptibilityto},603932Sticklersyndrome,typeV,614284 to ?Stickler syndrome, type V, 614284
Set publications
Eleanor Williams (Genomics England Curator)Publications for gene: COL9A2 were set to
Set mode of inheritance
Eleanor Williams (Genomics England Curator)Mode of inheritance for gene: COL9A2 was changed from to BIALLELIC, autosomal or pseudoautosomal
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: col9a2 has been classified as Amber List (Moderate Evidence).
Added New Source
Ellen McDonagh (Genomics England Curator)COL9A2 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: Radboud University Medical Center, Nijmegen,Expert
Added New Source
Ellen McDonagh (Genomics England Curator)COL9A2 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: Radboud University Medical Center, Nijmegen,Expert