Monogenic hearing loss
Gene: EYA1EnsemblGeneIds (GRCh38): ENSG00000104313
EnsemblGeneIds (GRCh37): ENSG00000104313
OMIM: 601653, Gene2Phenotype
EYA1 is in 12 panels
6 reviews
Eleanor Williams (Genomics England Curator)
PMID: 23840632 - Song et al 2013 - analysed EYA1, SIX1 and SIX5 in 7 families (10 patients) - all with typical BOR/BO syndrome, except for one patient who exhibited only mixed type of hearing loss and inner ear anomalies. One missense and three splice site mutations were identified in EYA1, while no mutations were found in either SIX1 or SIX5 geneCreated: 4 Nov 2020, 11:39 a.m. | Last Modified: 4 Nov 2020, 11:40 a.m.
Panel Version: 2.96
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Publications
Ellen McDonagh (Genomics England Curator)
New review confirms gene status and mode of inheritance; no changes required.Created: 11 Oct 2018, 1:45 p.m.
Lampros Mavrogiannis (Leeds Genetics Laboratory)
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Jun Shen (Harvard Medical School)
syndromicCreated: 17 Feb 2016, 3:35 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
#113650:Branchiootorenal syndrome 1, with or without cataracts[Long, narrow faceFacial nerve paralysis (10% of patients); Hearing loss (95% of patients)Sensorineural hearing loss (20% of patients)Conductive hearing loss (30% of patients)Mixed hearing loss (50% of patients)Preauricular pits (70-80% of patients)Microtia (30-60% of patients)Cup-shaped ears (30-60% of patients)Malformed pinnae (30-60% of patients)Hypoplastic pinnae (30-60% of patients)Narrowed external ear canal (30% of patients)Unconnected or fused stapes and incusStapes fixationBulbous internal auditory canalCochlear malformationHypoplastic cochleaMondini malformation; Lacrimal duct aplasia or stenosis (25% of patients); High, arched palateCleft palateBifid uvulaOverbiteGustatory lacrimation; Branchial cleft fistulas or cysts, usually bilateral (50 to 60% of patients); Renal anomalies (67% of patients)Renal dysplasia/aplasiaRenal collecting system anomaliesPolycystic kidneysAbnormal rotation of the kidneys; Vesicoureteric reflux]; #166780:?Otofaciocervical syndrome[Conductive hearing loss; Prominent auricles; Large conchae; Preauricular fistulas; Sunken nasal root; Narrow nose; Long face; Lateral cervical fistulas; Long neck; Sloping shoulders; Low-set clavicles; Winged scapulas; Mild mental retardation]; #602588:Branchiootic syndrome 1[Retrognathia; Sensorineural hearing lossConductive hearing lossMixed hearing lossPreauricular pitsMicrotiaMalformed pinnaeHypoplastic pinnaeCup-shaped earsLow-set earsNarrowed external ear canalUnconnected or fused stapes and incusStapes fixationBulbous internal auditory canalCochlear malformationHypoplastic cochlea; Branchial cleft fistulas or cysts, usually bilateral]
Damian Smedley (Genomics England Curator)
Comment when marking as ready: Expert review and OMIM confirmedCreated: 29 Jan 2016, 3:22 p.m.
Maria Bitner-Glindzicz (UCL)
Syndromic (BOR) but would want to know about a Tier 1 variantCreated: 19 Oct 2015, 7:24 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Expert
- Radboud University Medical Center, Nijmegen
- Emory Genetics Laboratory
- UKGTN
- Phenotypes
-
- hearing loss
- #113650:Branchiootorenal syndrome 1, with or without cataracts
- Anterior segment anomalies with or without cataract, 113650
- Branchiootic syndrome 1, 602588
- Otofaciocervical syndrome, 166780
- OMIM
- 601653
- Clinvar variants
- Variants in EYA1
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Deafness and congenital structural abnormalities
- Unexplained kidney failure in young people
- Ductal plate malformation
- DDG2P
- Clefting
- Unexplained young onset end-stage renal disease - additional genes
- Monogenic hearing loss
- Structural eye disease
- Fetal anomalies
- Intellectual disability
- CAKUT
- Bilateral congenital or childhood onset cataracts
History Filter Activity
Set publications
Eleanor Williams (Genomics England Curator)Publications for gene: EYA1 were set to PMID:10072433; 10471511; 10655545; 10991693; 11409867; 11703923; 11734542; 12404110; 14517553; 14628042; 14628052; 14628053; 15146463; 15226428; 15479196; 15493068; 16441263; 16691597; 16990542; 18177466; 18220287; 19206155; 19234442; 21280147; 2773990; 5365063; 9006082; 9020840; 9342347; 9359046; 9361030; 9603436
Set Phenotypes
Ellen McDonagh (Genomics England Curator)Phenotypes for EYA1 were set to hearing loss; #113650:Branchiootorenal syndrome 1, with or without cataracts; Anterior segment anomalies with or without cataract, 113650; Branchiootic syndrome 1, 602588; Otofaciocervical syndrome, 166780
Set publications
Ellen McDonagh (Genomics England Curator)Publications for EYA1 were set to PMID:10072433; 10471511; 10655545; 10991693; 11409867; 11703923; 11734542; 12404110; 14517553; 14628042; 14628052; 14628053; 15146463; 15226428; 15479196; 15493068; 16441263; 16691597; 16990542; 18177466; 18220287; 19206155; 19234442; 21280147; 2773990; 5365063; 9006082; 9020840; 9342347; 9359046; 9361030; 9603436
Set Mode of Inheritance
Damian Smedley (Genomics England Curator)Mode of inheritance for EYA1 was changed to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Gene classified by Genomics England curator
Damian Smedley (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Added New Source
Ellen McDonagh (Genomics England Curator)EYA1 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Emory Genetics Laboratory,Radboud University Medical Center, Nijmegen,Expert
Added New Source
Ellen McDonagh (Genomics England Curator)EYA1 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Emory Genetics Laboratory,Radboud University Medical Center, Nijmegen,Expert
Added New Source
Ellen McDonagh (Genomics England Curator)EYA1 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Emory Genetics Laboratory,Radboud University Medical Center, Nijmegen,Expert
Added New Source
Ellen McDonagh (Genomics England Curator)EYA1 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Emory Genetics Laboratory,Radboud University Medical Center, Nijmegen,Expert