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Monogenic hearing loss

Gene: MITF

Green List (high evidence)

MITF (melanogenesis associated transcription factor)
EnsemblGeneIds (GRCh38): ENSG00000187098
EnsemblGeneIds (GRCh37): ENSG00000187098
OMIM: 156845, Gene2Phenotype
MITF is in 9 panels

6 reviews

Ida Ertmanska (Genomics England Curator)

Green List (high evidence)

PMID: 30117279 Rauschendorf et al., 2019
Homozygous intronic MITF mutation causes severe Waardenburg syndrome type 2A. Report of a 6 month old Argentinian boy, parents were siblings. Proband homozygous for intronic MITF c.33+5G>C variant, which co-segregated with less severe features in heterozygous family members. The proband presented with congenital bilateral deafness, hair and skin depigmentation, and iris pigmentation abnormalities. Variant was previously reported in heterozygous state in a patient with Waardenburg syndrome in PMID: 21373256 Haddad et al., 2011.

PMID: 32728090 Thongpradit et al., 2020
Identified a homozygous c.1022G>A: p.Arg341His variant of MITF, which co-segregated with non-syndromic hearing loss in five affected children of a consanguineous hearing couple.
Created: 16 Feb 2026, 1:20 p.m. | Last Modified: 16 Feb 2026, 1:31 p.m.
Panel Version: 5.51

Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal

Phenotypes
hearing loss, autosomal recessive, MONDO:0019588; Waardenburg syndrome, type 2A, OMIM:193510; COMMAD syndrome, OMIM:617306

Publications

Lampros Mavrogiannis (Leeds Genetics Laboratory)

Green List (high evidence)

Mode of inheritance
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal

Ellen McDonagh (Genomics England Curator)

There is evidence to suggest there is reduced penetrance for this gene-disease association (PMID: 26100139). Due to feedback from Rowenna Roberts at GOSH, this gene has therefore been denoted as having incomplete pentrance.
Created: 17 Mar 2020, 11:19 a.m. | Last Modified: 17 Mar 2020, 11:19 a.m.
Panel Version: 2.8
Comment on mode of inheritance: Confirmed with Maria Bitner-Glindzicz (UCL) that the mode of inheritance should be changed from monoallelic to both monoallelic and biallelic, to cover COMMAD syndrome, after suggestion from another reviewer.
Created: 14 Aug 2018, 7:51 a.m.
Comment on publications: PMID: 27889061 - report of two patients with biallelic variants in this gene with COLOBOMA, OSTEOPETROSIS, MICROPHTHALMIA, MACROCEPHALY, ALBINISM, AND DEAFNESS (COMMAD syndrome) from two families. This is a probable DD gene for COMMAD syndrome.
Created: 1 Jun 2018, 2:59 p.m.
Comment on list classification: Confirmed DD gene.
Created: 17 Feb 2016, 5:01 p.m.

Jun Shen (Harvard Medical School)

Green List (high evidence)

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown

Phenotypes
#103470:Waardenburg syndrome/ocular albinism, digenic[Reduced visual acuity; Photophobia; Nystagmus; Translucent irides; Strabismus; Hypermetropia; Albinotic fundus; Foveal hypoplasia; Optic nerve dysplasia; Hypomelanosis; Lentigines; Deafness; Vestibular hypofunction; Macromelanosomes]; #103500:Tietz albinism-deafness syndrome[Hearing loss, sensorineural, bilateral profound congenital; White eyelashesWhite eyebrowsBlue eyesNo heterochromia iridisHypopigmented fundi; Fair skin; White eyelashesWhite eyebrowsWhite-blonde hair]; #193510:Waardenburg syndrome, type 2A[Deafness, congenital sensorineural; Dystopia canthorum absentHeterochromia iridisHypoplastic iris stomaSynophrys; Wide nasal bridgeHypoplastic alae nasi; Congenital partial albinism (leukoderma) on face, trunk, or limbs; White forelockWhite eyelashes and eyebrowsPremature graying of hair]; #614456:{Melanoma, cutaneous malignant, susceptibility to, 8}

Damian Smedley (Genomics England Curator)

Comment on list classification: Good evidence from expert reviewer and OMIM
Created: 31 Jan 2016, 7:51 p.m.

Maria Bitner-Glindzicz (UCL)

Green List (high evidence)

Good evidence for causing Waardenburg syndrome and the diagnosis could be missed so put on green list.
Created: 19 Oct 2015, 5:59 p.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Details

Mode of Inheritance
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Phenotypes
  • Waardenburg syndrome, type 2A, 193510
  • Waardenburg syndrome/ocular albinism, digenic, 103470
  • Tietz albinism-deafness syndrome, 103500
  • {Melanoma, cutaneous malignant, susceptibility to, 8}, 614456
OMIM
156845
Clinvar variants
Variants in MITF
Penetrance
Incomplete
Publications
Panels with this gene

History Filter Activity

17 Mar 2020, Gel status: 3

Set publications

Ellen McDonagh (Genomics England Curator)

Publications for gene: MITF were set to 10578055; 10587587; 10760582; 10851256; 10942418; 11331755; 11929831; 11929848; 11930005; 12032083; 12086670; 12093801; 12235125; 12668617; 13985019; 15254223; 15623583; 15716956; 16001072; 16140982; 16998588; 17182868; 18316599; 18510545; 19188590; 22012259; 22080950; 26168401; 666627; 7874158; 7874167; 7874168; 8069297; 8578601; 8589691; 8659547; 8782819; 9158138; 9499424; 9500554; 9546825; 9677380; 9856573; 27889061

17 Mar 2020, Gel status: 3

Removed Source, Set penetrance

Ellen McDonagh (Genomics England Curator)

Source Expert was removed from MITF. Penetrance for gene MITF was set from to Complete

13 Jan 2020, Gel status: 3

Removed Tag

Ellen McDonagh (Genomics England Curator)

Tag watchlist was removed from gene: MITF.

14 Aug 2018, Gel status: 3

Set mode of inheritance

Ellen McDonagh (Genomics England Curator)

Mode of inheritance for gene: MITF was changed from MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted to BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal

1 Jun 2018, Gel status: 3

Set publications

Ellen McDonagh (Genomics England Curator)

Publications for gene: MITF were set to 10578055; 10587587; 10760582; 10851256; 10942418; 11331755; 11929831; 11929848; 11930005; 12032083; 12086670; 12093801; 12235125; 12668617; 13985019; 15254223; 15623583; 15716956; 16001072; 16140982; 16998588; 17182868; 18316599; 18510545; 19188590; 22012259; 22080950; 26168401; 666627; 7874158; 7874167; 7874168; 8069297; 8578601; 8589691; 8659547; 8782819; 9158138; 9499424; 9500554; 9546825; 9677380; 9856573; 27889061

17 Feb 2016, Gel status: 4

Set Phenotypes

Ellen McDonagh (Genomics England Curator)

Phenotypes for MITF were set to Waardenburg syndrome, type 2A, 193510; Waardenburg syndrome/ocular albinism, digenic, 103470; Tietz albinism-deafness syndrome, 103500; {Melanoma, cutaneous malignant, susceptibility to, 8}, 614456

17 Feb 2016, Gel status: 4

Set publications

Ellen McDonagh (Genomics England Curator)

Publications for MITF were set to PMID:10578055; 10587587; 10760582; 10851256; 10942418; 11331755; 11929831; 11929848; 11930005; 12032083; 12086670; 12093801; 12235125; 12668617; 13985019; 15254223; 15623583; 15716956; 16001072; 16140982; 16998588; 17182868; 18316599; 18510545; 19188590; 22012259; 22080950; 26168401; 666627; 7874158; 7874167; 7874168; 8069297; 8578601; 8589691; 8659547; 8782819; 9158138; 9499424; 9500554; 9546825; 9677380; 9856573

17 Feb 2016, Gel status: 4

Gene classified by Genomics England curator

Ellen McDonagh (Genomics England Curator)

This gene has been classified as Green List (High Evidence).

1 Feb 2016, Gel status: 4

Set Mode of Inheritance

Damian Smedley (Genomics England Curator)

Mode of inheritance for MITF was changed to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

31 Jan 2016, Gel status: 4

Gene classified by Genomics England curator

Damian Smedley (Genomics England Curator)

This gene has been classified as Green List (High Evidence).

31 Jan 2016, Gel status: 4

Gene classified by Genomics England curator

Damian Smedley (Genomics England Curator)

This gene has been classified as Green List (High Evidence).

24 Jun 2015, Gel status: 2

Added New Source

Ellen McDonagh (Genomics England Curator)

MITF was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Radboud University Medical Center, Nijmegen,Expert

24 Jun 2015, Gel status: 2

Added New Source

Ellen McDonagh (Genomics England Curator)

MITF was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Radboud University Medical Center, Nijmegen,Expert

24 Jun 2015, Gel status: 1

Added New Source

Ellen McDonagh (Genomics England Curator)

MITF was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Radboud University Medical Center, Nijmegen,Expert