Retinal disorders
Gene: COL9A2EnsemblGeneIds (GRCh38): ENSG00000049089
EnsemblGeneIds (GRCh37): ENSG00000049089
OMIM: 120260, Gene2Phenotype
COL9A2 is in 15 panels
4 reviews
Achchuthan Shanmugasundram (Genomics England Curator)
The rating of this gene has been updated to Green following NHS Genomic Medicine Service approval.Created: 6 Feb 2023, 8:12 a.m. | Last Modified: 6 Feb 2023, 8:12 a.m.
Panel Version: 3.27
Patients from four unrelated families were identified with autosomal recessive variants in COL9A2 gene and were associated with Stickler syndrome. Affected family members from PMID:21671392 had high myopia, vitreoretinal degeneration and retinal detachment, while both brothers from PMID:33356723 demonstrated reduced visual acuity, vitreous changes and myopia with the proband being operated for retinal detachment and cataract in one eye. Two patients from a family reported in PMID:31090205 had retinal disorders.
The retinal phenotypes overlap with Stickler syndrome and the gene is green on Stickler syndrome panel ((https://panelapp.genomicsengland.co.uk/panels/3/gene/COL9A2/)
It has previously been decided (2019) in consultation with Gavin Arno (UCL Institute of Ophthalmology/Moorfields Eye Hospital) that this gene can stay red in this panel. Given this gene has recently been proposed for this panel by an expert, I am recommending that the Test Evaluation Working Group review and define the panel scope, and reach consensus as to whether this gene is appropriate for inclusion.Created: 8 Jan 2023, 12:27 p.m. | Last Modified: 8 Jan 2023, 12:27 p.m.
Panel Version: 3.9
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Stickler syndrome, type V, OMIM:614284
Publications
Eleanor Williams (Genomics England Curator)
Review submitted on behalf of Robert Henderson, Mr Chien Wong, Mr CK Patel. Publications: Baker, S., Booth, C., Fillman, C., Shapiro, M., Blair, M. P., Hyland, J. C., Ala-Kokko, L.A loss of function mutation in theCOL9A2gene cause autosomal recessive Stickler syndrome.Am. J. Med. Genet. 155A: 1668-1672, 2011.; Kjellstrm U, Martell S, Brobeck C, Andrasson S. Autosomal recessive Stickler syndrome associated with homozygous mutations in the COL9A2 gene. Ophthalmic Genet. 2021 Apr;42(2):161-169. doi: 10.1080/13816810.2020.1861309.Created: 21 Dec 2022, 4:51 p.m. | Last Modified: 21 Dec 2022, 4:51 p.m.
Panel Version: 3.6
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Stickler Syndrome, high myopia, retinal detachment,
Ivone Leong (Genomics England Curator)
COL9A2 is a green gene on the Stickler syndrome panel (code 3, version 2.0). After discussion with Gavin Arno (UCL Institute of Ophthalmology/Moorfields Eye Hospital) it was decided that it is all right to leave COL9A2 off this panel (Retinal disorders)Created: 30 Aug 2019, 2:52 p.m. | Last Modified: 30 Aug 2019, 2:52 p.m.
Panel Version: 1.160
Gavin Arno (UCL Institute of Ophthalmology/Moorfields Eye Hospital)
overlapping phenotype - SticklerCreated: 30 Aug 2019, 2:12 p.m. | Last Modified: 30 Aug 2019, 2:12 p.m.
Panel Version: 1.159
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- Phenotypes
-
- Stickler syndrome, type V, OMIM:614284
- OMIM
- 120260
- Clinvar variants
- Variants in COL9A2
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Thoracic aortic aneurysm or dissection (GMS)
- Retinal disorders
- DDG2P
- Clefting
- Stickler syndrome
- Osteogenesis imperfecta
- Multiple Epiphyseal Dysplasia
- Thoracic aortic aneurysm or dissection
- Structural eye disease
- Monogenic hearing loss
- Ehlers Danlos syndrome with a likely monogenic cause
- Skeletal dysplasia
- Fetal anomalies
- Glaucoma (developmental)
- Intellectual disability
History Filter Activity
Removed Tag, Removed Tag, Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag to_be_confirmed_NHSE was removed from gene: COL9A2. Tag Q1_23_promote_green was removed from gene: COL9A2. Tag Q1_23_expert_review was removed from gene: COL9A2.
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: col9a2 has been classified as Green List (High Evidence).
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag to_be_confirmed_NHSE tag was added to gene: COL9A2.
Added Tag, Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q1_23_promote_green tag was added to gene: COL9A2. Tag Q1_23_expert_review tag was added to gene: COL9A2.
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: COL9A2 were set to
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: COL9A2 were changed from Eye Disorders to Stickler syndrome, type V, OMIM:614284
Set mode of inheritance
Arina Puzriakova (Genomics England Curator)Mode of inheritance for gene: COL9A2 was changed from to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Ivone Leong (Genomics England Curator)Source NHS GMS was added to COL9A2.
Added New Source
Ellen McDonagh (Genomics England Curator)COL9A2 was added to Posterior segment abnormalitiespanel. Sources: Expert Review Red
Created
Ellen McDonagh (Genomics England Curator)COL9A2 was created by ellenmcdonagh