Skeletal dysplasia
Gene: CREB3L1EnsemblGeneIds (GRCh38): ENSG00000157613
EnsemblGeneIds (GRCh37): ENSG00000157613
OMIM: 616215, Gene2Phenotype
CREB3L1 is in 3 panels
4 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
OI and decreasing bone density gp of SD. 2 unrelated cases reported.; Review on behalf of Tracy LesterCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Osteogenesis imperfecta, type XVI 616229
Publications
Eleanor Williams (Genomics England Curator)
Comment on list classification: Changing rating from red to green. Including genes that are green on the Osteogenesis imperfecta panel (panel ID:196, version 2.0) as green on the Skeletal dysplasia panel on the advice of Prof Lyn Chitty.Created: 11 Dec 2019, 1:59 p.m. | Last Modified: 11 Dec 2019, 2:01 p.m.
Panel Version: 1.256
Comment on list classification: Decided to wait for GMS approval before upgrading to green. Demoting back to red.Created: 9 Sep 2019, 9:47 p.m. | Last Modified: 9 Sep 2019, 9:49 p.m.
Panel Version: 1.200
Comment on list classification: Upgrading from red to green. Is Green on the Osteogenesis imperfecta panel and 4 cases reported.Created: 9 Sep 2019, 9:33 p.m. | Last Modified: 9 Sep 2019, 9:46 p.m.
Panel Version: 1.198
4 cases now reported each in a publication (PMID: 24079343 - whole gene deletion, PMID: 28817112 - 3bp in-frame deletion (c.934_936delAAG [p.Lys312del], PMID: 29936144 - premature stop codon c.1284C>A; p.Tyr428*, PMID: 30657919 - homozygous missense variant (p.(Ala304Val))Created: 9 Sep 2019, 9:30 p.m. | Last Modified: 9 Sep 2019, 9:30 p.m.
Panel Version: 1.193
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: CREB3L1; Initial rating suggestion: AmberCreated: 6 Mar 2019, 11:36 a.m.
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Not associated with phenotype in OMIM nor G2P. Only one variant reportedCreated: 28 Jul 2016, 8:45 a.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 1Created: 17 Jun 2016, 8:02 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Progressive deforming osteogenesis imperfecta; Severe osteogenesis imperfecta 616229
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- Literature
- Expert Review
- Phenotypes
-
- Osteogenesis imperfecta, type XVI 616229
- OMIM
- 616215
- Clinvar variants
- Variants in CREB3L1
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: creb3l1 has been classified as Green List (High Evidence).
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: creb3l1 has been classified as Red List (Low Evidence).
Set publications
Eleanor Williams (Genomics England Curator)Publications for gene: CREB3L1 were set to 25007323; 29936144.; 28817112
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: creb3l1 has been classified as Green List (High Evidence).
Set Phenotypes, Set publications
Eleanor Williams (Genomics England Curator)Added phenotypes Osteogenesis imperfecta, type XVI 616229 for gene: CREB3L1 Publications for gene CREB3L1 were changed from 25007323 to 25007323; 29936144.; 28817112
Added New Source
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to CREB3L1.
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for CREB3L1 were set to Osteogenesis imperfecta, type XVI 616229
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for CREB3L1 were set to Severe osteogenesis imperfecta 616229
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for CREB3L1 were set to Severe osteogenesis imperfecta 616229
Set publications
Sarah Leigh (Genomics England Curator)Publications for CREB3L1 were set to 25007323
Set Mode of Inheritance, Added New Source
Sarah Leigh (Genomics England Curator)CREB3L1 was added to Unexplained skeletal dysplasiapanel. Source: Expert Review CREB3L1 was added to Unexplained skeletal dysplasiapanel. Source: Literature Model of inheritance for gene CREB3L1 was set to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Sarah Leigh (Genomics England Curator)CREB3L1 was added to Unexplained skeletal dysplasiapanel. Sources:
Created
Sarah Leigh (Genomics England Curator)CREB3L1 was created by sleigh