Skeletal dysplasia
Gene: TCOF1EnsemblGeneIds (GRCh38): ENSG00000070814
EnsemblGeneIds (GRCh37): ENSG00000070814
OMIM: 606847, Gene2Phenotype
TCOF1 is in 9 panels
5 reviews
Rhoda Akilapa (North West Thames Regional Genetics Service)
?remove from SD panel, as already on Craniosynostosis panel. Limb anomalies very rare- 1.5% (1/67)Created: 6 Sep 2019, 3:34 p.m. | Last Modified: 6 Sep 2019, 3:34 p.m.
Panel Version: 1.193
Tracy Lester (Genetics laboratory, Oxford UK)
Dysostoses with predominant craniofacial involvement gp of SD - several cases.Do you report variants in this gene as part of your current diagnostic practice? YES - for TCS; Review on behalf of Tracy LesterCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Treacher Collins syndrome 1 154500
Variants in this GENE are reported as part of current diagnostic practice
Eleanor Williams (Genomics England Curator)
Comment from Tracy Lester - TCOF1 should stay on the skeletal dysplasia panel in the absence of a specific craniofacial panel. It is currently red on the Craniosynostosis panel (https://panelapp.genomicsengland.co.uk/panels/168/gene/TCOF1/)Created: 28 Nov 2019, 11:37 a.m. | Last Modified: 28 Nov 2019, 11:37 a.m.
Panel Version: 1.246
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: TCOF1; Initial rating suggestion: greenCreated: 6 Mar 2019, 11:37 a.m.
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Associated with phenotype in OMIM and G2P. Numerous variants reportedCreated: 1 Aug 2016, 8:10 a.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 2Created: 17 Jun 2016, 8:09 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Treacher Collins syndrome 1 154500
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- NHS GMS
- Expert Review Green
- Expert list
- Illumina TruGenome Clinical Sequencing Services
- Radboud University Medical Center, Nijmegen
- UKGTN
- Phenotypes
-
- Treacher Collins syndrome 1 154500
- OMIM
- 606847
- Clinvar variants
- Variants in TCOF1
- Penetrance
- Complete
- Panels with this gene
History Filter Activity
Set Phenotypes
Eleanor Williams (Genomics England Curator)Added phenotypes Treacher Collins syndrome 1 154500 for gene: TCOF1
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to TCOF1. Rating Changed from Green List (high evidence) to Green List (high evidence)
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for TCOF1 were set to Treacher Collins syndrome 1 154500
Set Mode of Inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for TCOF1 was changed to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Upload gene information
Sarah Leigh (Genomics England Curator)TCOF1 was added to Unexplained skeletal dysplasiapanel. Sources: Expert list,Illumina TruGenome Clinical Sequencing Services,Radboud University Medical Center, Nijmegen,UKGTN
Created
Sarah Leigh (Genomics England Curator)TCOF1 was created by sleigh
Added New Source
Sarah Leigh (Genomics England Curator)TCOF1 was added to Unexplained skeletal dysplasiapanel. Sources: