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Skeletal dysplasia

Gene: FGF4

Green List (high evidence)

FGF4 (fibroblast growth factor 4)
EnsemblGeneIds (GRCh38): ENSG00000075388
EnsemblGeneIds (GRCh37): ENSG00000075388
OMIM: 164980, Gene2Phenotype
FGF4 is in 2 panels

1 review

Eleanor Williams (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green and the mode of inheritance set to BIALLELIC, autosomal or pseudoautosomal following NHS Genomic Medicine Service approval.
Created: 11 Mar 2026, 11:31 p.m. | Last Modified: 11 Mar 2026, 11:31 p.m.
Panel Version: 8.37
Comment on list classification: Promoting to amber with a recommendation of green rating following GMS review. 2 unrelated cases plus a supportive mouse model.
Created: 14 Jul 2025, 9:23 p.m. | Last Modified: 14 Jul 2025, 9:23 p.m.
Panel Version: 8.6
Associated with Short-rib thoracic dysplasia 22 without polydactyly, OMIM:621260 (AR)

PMID: 40259859 - Watts et al 2025 report 2 unrelated families (1 in the 100,000 Genomes project) with a clinical diagnosis of thoracic dystrophy with associated respiratory insufficiency.

Family 1 - 2 affected boys clinically suspected to have Jeune syndrome, and 3 unaffected children born to healthy consanguineous 2nd cousin parents. Both affected individuals had narrow/small thorax and short ribs (11 pairs). 2nd child died at 3  months from respiratory infection. Both affected children were homozygous for a missense variant in FGF4 (c.256C>T p.(Leu86Phe)). Parents are confirmed carriers and 2 of the 3 unaffected siblings do not carry the variant.

Family 2 - 1 male with a chest shape suggesting thoracic dystrophy and a clinical suspicion of Jeune syndrome. A biallelic missense variant in FGF4 NM_002007.4:c.611C>A p.(Pro204His) was identified. Parents were both heterozygous carriers.

The variants are absent from gnomAD and UK Biobank and are predicted to be damaging by multiple in silico tools.

PMID: 33210601 - Anderson et al 2020 - Mouse mutants lacking Fgf4 Fgf4 show a variety of segmentation defects in the cervical and thoracic vertebrae with 100% penetrance.
Sources: Literature
Created: 14 Jul 2025, 9:22 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Short-rib thoracic dysplasia 22 without polydactyly, OMIM:621260; Jeune syndrome, MONDO:0018770

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Literature
Phenotypes
  • Short-rib thoracic dysplasia 22 without polydactyly, OMIM:621260
  • Jeune syndrome, MONDO:0018770
OMIM
164980
Clinvar variants
Variants in FGF4
Penetrance
None
Publications
Panels with this gene

History Filter Activity

11 Mar 2026, Gel status: 3

Removed Tag

Eleanor Williams (Genomics England Curator)

Tag Q3_25_promote_green was removed from gene: FGF4.

11 Mar 2026, Gel status: 3

Added New Source, Added New Source, Status Update

Eleanor Williams (Genomics England Curator)

Source NHS GMS was added to FGF4. Source Expert Review Green was added to FGF4. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

14 Jul 2025, Gel status: 2

Entity classified by Genomics England curator

Eleanor Williams (Genomics England Curator)

Gene: fgf4 has been classified as Amber List (Moderate Evidence).

14 Jul 2025, Gel status: 1

Created, Added New Source, Added Tag, Set mode of inheritance, Set publications, Set Phenotypes

Eleanor Williams (Genomics England Curator)

gene: FGF4 was added gene: FGF4 was added to Skeletal dysplasia. Sources: Literature Q3_25_promote_green tags were added to gene: FGF4. Mode of inheritance for gene: FGF4 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: FGF4 were set to 40259859; 33210601 Phenotypes for gene: FGF4 were set to Short-rib thoracic dysplasia 22 without polydactyly, OMIM:621260; Jeune syndrome, MONDO:0018770 Review for gene: FGF4 was set to GREEN