Genes in panel
STRs in panel
Prev Next

Skeletal dysplasia

Gene: FGF4

Amber List (moderate evidence)

FGF4 (fibroblast growth factor 4)
EnsemblGeneIds (GRCh38): ENSG00000075388
EnsemblGeneIds (GRCh37): ENSG00000075388
OMIM: 164980, Gene2Phenotype
FGF4 is in 1 panel

1 review

Eleanor Williams (Genomics England Curator)

Green List (high evidence)

Comment on list classification: Promoting to amber with a recommendation of green rating following GMS review. 2 unrelated cases plus a supportive mouse model.
Created: 14 Jul 2025, 9:23 p.m. | Last Modified: 14 Jul 2025, 9:23 p.m.
Panel Version: 8.6
Associated with Short-rib thoracic dysplasia 22 without polydactyly, OMIM:621260 (AR)

PMID: 40259859 - Watts et al 2025 report 2 unrelated families (1 in the 100,000 Genomes project) with a clinical diagnosis of thoracic dystrophy with associated respiratory insufficiency.

Family 1 - 2 affected boys clinically suspected to have Jeune syndrome, and 3 unaffected children born to healthy consanguineous 2nd cousin parents. Both affected individuals had narrow/small thorax and short ribs (11 pairs). 2nd child died at 3  months from respiratory infection. Both affected children were homozygous for a missense variant in FGF4 (c.256C>T p.(Leu86Phe)). Parents are confirmed carriers and 2 of the 3 unaffected siblings do not carry the variant.

Family 2 - 1 male with a chest shape suggesting thoracic dystrophy and a clinical suspicion of Jeune syndrome. A biallelic missense variant in FGF4 NM_002007.4:c.611C>A p.(Pro204His) was identified. Parents were both heterozygous carriers.

The variants are absent from gnomAD and UK Biobank and are predicted to be damaging by multiple in silico tools.

PMID: 33210601 - Anderson et al 2020 - Mouse mutants lacking Fgf4 Fgf4 show a variety of segmentation defects in the cervical and thoracic vertebrae with 100% penetrance.
Sources: Literature
Created: 14 Jul 2025, 9:22 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Short-rib thoracic dysplasia 22 without polydactyly, OMIM:621260; Jeune syndrome, MONDO:0018770

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Short-rib thoracic dysplasia 22 without polydactyly, OMIM:621260
  • Jeune syndrome, MONDO:0018770
Tags
Q3_25_promote_green
OMIM
164980
Clinvar variants
Variants in FGF4
Penetrance
None
Publications
Panels with this gene

History Filter Activity

14 Jul 2025, Gel status: 2

Entity classified by Genomics England curator

Eleanor Williams (Genomics England Curator)

Gene: fgf4 has been classified as Amber List (Moderate Evidence).

14 Jul 2025, Gel status: 1

Created, Added New Source, Added Tag, Set mode of inheritance, Set publications, Set Phenotypes

Eleanor Williams (Genomics England Curator)

gene: FGF4 was added gene: FGF4 was added to Skeletal dysplasia. Sources: Literature Q3_25_promote_green tags were added to gene: FGF4. Mode of inheritance for gene: FGF4 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: FGF4 were set to 40259859; 33210601 Phenotypes for gene: FGF4 were set to Short-rib thoracic dysplasia 22 without polydactyly, OMIM:621260; Jeune syndrome, MONDO:0018770 Review for gene: FGF4 was set to GREEN