Skeletal dysplasia
Gene: RAB33BEnsemblGeneIds (GRCh38): ENSG00000172007
EnsemblGeneIds (GRCh37): ENSG00000172007
OMIM: 605950, Gene2Phenotype
RAB33B is in 2 panels
4 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
spondylo-epi-(meta)-physeal dysplasias gp of SD. >3 cases; Review on behalf of Tracy LesterCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Smith-McCort dysplasia 2 615222
Eleanor Williams (Genomics England Curator)
Comment on list classification: 5 cases reported.Created: 17 Jul 2019, 1:04 p.m. | Last Modified: 17 Jul 2019, 1:04 p.m.
Panel Version: 1.184
Associated with Smith-McCort dysplasia 2 (615222) in OMIM.
PMID: 22652534 - Alshammari et al. (2012) - 1 family - a consanguineous Saudi family segregating Smith-McCort syndrome. Identified a homozygous missense mutation in the RAB33B gene (K46Q). Immunoblot analysis showed severe deficiency of RAB33B in patient cells compared with control cells, and patient fibroblasts also displayed a marked reduction in the immunofluorescence signal corresponding to RAB33B but comparable signal intensity to the Golgi marker giantin.
PMID: 16470731/23042644 - Neumann et al. (2006)/Dupuis et al. (2013) - 1 case. 22-year-old Turkish man with Smith-McCort syndrome-2. Identified a homozygous missense mutation in the RAB33B gene (N148K;). By Western blot analysis and immunofluorescence studies, Dupuis et al. (2013) found marked reduction of the RAB33B protein.
PMID: 28127940 - Salian et al. (2017) - 3 families. 3 SMC patients with four novel pathogenic variants in RAB33B, including homozygosity for c.211C>T (p.R71*), homozygosity for c.365T>C (p.F122S), and compound heterozygosity for c.48delCGGGGCAG (p.G17Vfs*58) and c.490C>T (p.Q164*). The mutations segregated with the disorder in each family. Skeletal survey of all three patients showed predominant abnormalities of the spine and pelvic bones, mildly affected epi‐metaphyses of the long bones, and brachydactyly.
5 cases in total.Created: 8 May 2019, 3:17 p.m.
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: RAB33B; Initial rating suggestion: greenCreated: 6 Mar 2019, 11:36 a.m.
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Associated with phenotype in OMIM . At least two variants reportedCreated: 29 Jul 2016, 1:40 p.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 1Created: 17 Jun 2016, 8:07 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Smith-McCort dysplasia 2 615222
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- Expert list
- Illumina TruGenome Clinical Sequencing Services
- Radboud University Medical Center, Nijmegen
- Phenotypes
-
- Smith-McCort dysplasia 2 615222
- OMIM
- 605950
- Clinvar variants
- Variants in RAB33B
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Set publications
Eleanor Williams (Genomics England Curator)Publications for gene: RAB33B were set to
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: rab33b has been classified as Green List (High Evidence).
Set Phenotypes
Eleanor Williams (Genomics England Curator)Added phenotypes Smith-McCort dysplasia 2 615222 for gene: RAB33B
Added New Source
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to RAB33B.
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for RAB33B were set to Smith-McCort dysplasia 2 615222
Set Mode of Inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for RAB33B was changed to BIALLELIC, autosomal or pseudoautosomal
Upload gene information
Sarah Leigh (Genomics England Curator)RAB33B was added to Unexplained skeletal dysplasiapanel. Sources: Expert list,Illumina TruGenome Clinical Sequencing Services,Radboud University Medical Center, Nijmegen
Added New Source
Sarah Leigh (Genomics England Curator)RAB33B was added to Unexplained skeletal dysplasiapanel. Sources:
Created
Sarah Leigh (Genomics England Curator)RAB33B was created by sleigh