Skeletal dysplasia
Gene: RASGRP2EnsemblGeneIds (GRCh38): ENSG00000068831
EnsemblGeneIds (GRCh37): ENSG00000068831
OMIM: 605577, Gene2Phenotype
RASGRP2 is in 5 panels
4 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
Osteopetrosis and related disorders SD gp - 4 cases (3 families) all had increased bone density. Primary feature is bleeding/immdef - gene previously called CalDAG-GEF1.; Review on behalf of Tracy LesterCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Bleeding disorder, platelet-type, 18 615888
Publications
Eleanor Williams (Genomics England Curator)
PMID: 18709451 - Kilic et al 2009 - 3 families with 4 individuals with Leukocyte adhesion deficiency (LAD) type III (severe recurrent infections, leukocytosis, and increased bleeding tendency). All patients had increased bone density on X-ray similar to that seen in patients with osteopetrosis, and variants in the CalDAG-GEF1 gene (now called RASGRP2). A splice junction mutation was found in families 1 and 3. The patient from family 2 had very low levels of CalDAG-GEF1. . Knock out CalDAG-GEFI deficient mice exhibit the same platelet and neutrophil adhesion defect but NO abnormalities in bone density on X-ray.
PMID: 24958846 - Canault et al 2014 - three siblings affected by severe bleeding - whole-exome sequencing identified the culprit mutation (cG742T) in RASGRP2 - couldn't find any mention of a bone density/skeletal dysplasia phenotype.Created: 13 May 2019, 1:24 p.m.
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: RASGRP2; Initial rating suggestion: green if SD, red if notCreated: 6 Mar 2019, 11:36 a.m.
Sarah Leigh (Genomics England Curator)
Comment on publications: 18709451 reports a splice site variant in two apparently unrelated consanguineous families resulting in reduced expression (qPCR)(no HVGS provided), reduced expression was also reported in another consanguineous family (no HVGS provided)Created: 11 Jul 2016, 7:34 a.m.
Comment on list classification: Used diagnostically by Ana Beleza (Guy's and St Thomas' NHS Foundation Trust)Created: 21 Jun 2016, 1:08 p.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 2Created: 17 Jun 2016, 8:07 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
?Bleeding disorder, platelet-type, 18 615888; Osteopetrosis - Kilic SS et al. The clinical spectrum of leukocyte adhesion deficiency (LAD) III due to defective CalDAG-GEF1. J Clin Immunol. 2009 Jan, 29(1):117-22.
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- NHS GMS
- Expert Review Green
- Phenotypes
-
- Bleeding disorder, platelet-type, 18 615888, also with osteopetrosis like bone abnormalities and neurodevelopmental defects
- Bleeding disorder, platelet-type, 18 615888
- OMIM
- 605577
- Clinvar variants
- Variants in RASGRP2
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes, Set publications
Eleanor Williams (Genomics England Curator)Added phenotypes Bleeding disorder, platelet-type, 18 615888 for gene: RASGRP2 Publications for gene RASGRP2 were changed from 18709451; 24958846 to 24958846; 18709451
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to RASGRP2. Rating Changed from Green List (high evidence) to Green List (high evidence)
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Set publications
Sarah Leigh (Genomics England Curator)Publications for RASGRP2 were set to 18709451; 24958846
Set publications
Sarah Leigh (Genomics England Curator)Publications for RASGRP2 were set to 18709451; 24958846
Set Mode of Inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for RASGRP2 was changed to BIALLELIC, autosomal or pseudoautosomal
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for RASGRP2 were set to Bleeding disorder, platelet-type, 18 615888, also with osteopetrosis like bone abnormalities and neurodevelopmental defects
Set publications
Sarah Leigh (Genomics England Curator)Publications for RASGRP2 were set to 18709451
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Added New Source
Sarah Leigh (Genomics England Curator)RASGRP2 was added to Unexplained skeletal dysplasiapanel. Sources:
Created
Sarah Leigh (Genomics England Curator)RASGRP2 was created by sleigh