Skeletal dysplasia
Gene: SOX9EnsemblGeneIds (GRCh38): ENSG00000125398
EnsemblGeneIds (GRCh37): ENSG00000125398
OMIM: 608160, Gene2Phenotype
SOX9 is in 10 panels
4 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
Campomelic dysplasia and related disorders gp of SD, brachydactylies (without extraskeletal manifestations) gp of SD. Several cases. translocations with breakpts upstream of gene,deletions upstream of gene, LOF in gene; Review on behalf of Tracy LesterCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Acampomelic campomelic dysplasia 114290; Campomelic dysplasia 114290; Campomelic dysplasia with autosomal sex reversal 114290
Mode of pathogenicity
Other - please provide details in the comments
Eleanor Williams (Genomics England Curator)
ESHG2020 - Poster E-PO1.34 Ledig et al Report a case of two sisters, 46XY, who are homozygous for a variant, c.1518C>G p.(Leu506Val), in SOX9. The sisters had a suspicion of non-syndromic XY DSD (disorder of sexual development) and no signs of skeletal malformations. By luciferase assay the variant reporte dhereshowed no decrease of transactivating function on Col2a1 promotor in contrast to two SOX9 mutations (c.347C>T p.(Ala116Val) and c.358C>T p.(Arg120Cys)) known to be associated with CD. The authors suggest that SOX9 variant c.1518C>G p.(Leu506Val) is a hypomorphic mutation that causes XY DSD without raising any SOX9 related skeletal phenotype.
No publication relating to this work could be found in PubMed at this time.Created: 12 Jun 2020, 7:27 p.m. | Last Modified: 12 Jun 2020, 7:27 p.m.
Panel Version: 2.9
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: SOX9; Initial rating suggestion: greenCreated: 6 Mar 2019, 11:37 a.m.
Sarah Leigh (Genomics England Curator)
Listed as associated with Skeletal Dysplasia by Gene Advisor (June 2016), Steve AbbsCreated: 27 Jul 2016, 9:51 a.m.
Comment on list classification: Used diagnostically by Ana Beleza (Guy's and St Thomas' NHS Foundation Trust)Created: 21 Jun 2016, 1:10 p.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 1Created: 17 Jun 2016, 8:08 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Acampomelic campomelic dysplasia 114290; Campomelic dysplasia 114290; Campomelic dysplasia with autosomal sex reversal 114290
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- NHS GMS
- Expert Review Green
- Phenotypes
-
- Campomelic dysplasia with autosomal sex reversal 114290
- Acampomelic campomelic dysplasia 114290
- Campomelic dysplasia 114290
- OMIM
- 608160
- Clinvar variants
- Variants in SOX9
- Penetrance
- Complete
- Panels with this gene
History Filter Activity
Set Phenotypes
Eleanor Williams (Genomics England Curator)Added phenotypes Campomelic dysplasia with autosomal sex reversal 114290; Acampomelic campomelic dysplasia 114290; Campomelic dysplasia 114290 for gene: SOX9
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to SOX9. Rating Changed from Green List (high evidence) to Green List (high evidence)
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for SOX9 were set to Acampomelic campomelic dysplasia 114290; Campomelic dysplasia 114290; Campomelic dysplasia with autosomal sex reversal 114290
Set Mode of Inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for SOX9 was changed to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Created
Sarah Leigh (Genomics England Curator)SOX9 was created by sleigh
Added New Source
Sarah Leigh (Genomics England Curator)SOX9 was added to Unexplained skeletal dysplasiapanel. Sources: