Skeletal dysplasia
Gene: THPOEnsemblGeneIds (GRCh38): ENSG00000090534
EnsemblGeneIds (GRCh37): ENSG00000090534
OMIM: 600044, Gene2Phenotype
THPO is in 7 panels
4 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
Limb hypoplasia-reduction defects gp of SD - ?secondary to blood disorder.; Review on behalf of Tracy Lester/Michael OldridgeCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Thrombocythemia 1 187950 (rare presentation with congenital limb defects)
Publications
Eleanor Williams (Genomics England Curator)
Comment on list classification: Demoted from Green to red. Only two cases reported with a limb defect and no clear wider skeletal phenotype.Created: 20 Nov 2019, 12:15 p.m. | Last Modified: 20 Nov 2019, 12:15 p.m.
Panel Version: 1.218
Associated with Thrombocythemia 1 #187950 (AD) in OMIM.
PMID: 19553636 - Graziano et al 2009 - report where the father has thrombocythemia and limb defects (absence of forearm and hand, absence of foot). Two sons had milder lower limb defects. A G185T heterozygous mutation was detected in THPO. The grandfather was found to have the variant and had thrombocythemia but no limb defect.
PMID: 22453305 - Stockklausner et al 2012 - report two families with Hereditary thrombocythemia resulting from a THPO c.13+1 G>C mutation in the splice donor of intron 3. In one family there were coexisting distal limb defects in 2 out of 4 individuals with thrombocythemia (complex limb defects of the left hand in one individual, and absent proximal, middle, and distal phalanges at digits 3–5, a dysplastic proximal phalanx at digit 2 with absent middle and distal phalanx and shortened metacarpal bones at digits 3 and 4, carpal bones were partly fused to metacarpal bones at digits 2–5 in the other).Created: 20 Nov 2019, 12:13 p.m. | Last Modified: 20 Nov 2019, 12:13 p.m.
Panel Version: 1.217
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: THPO; Initial rating suggestion: redCreated: 6 Mar 2019, 11:37 a.m.
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: At least two reports of variants associated with Thrombocythemia 1 187950 with congenital limb defectsCreated: 12 Jul 2016, 1:56 p.m.
Comment on mode of pathogenicity: Gain of functionCreated: 12 Jul 2016, 1:55 p.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 2Created: 17 Jun 2016, 8:09 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Thrombocythemia 1 187950; Stockklausner C et al. Hereditary thrombocythemia caused by a thrombopoietin (THPO) gain-of-function mutation associated with multiple myeloma and congenital limb defects. Ann Hematol. 2012 Jul, 91(7):1129-33; Graziano C et al. Association of hereditary thrombocythemia and distal limb defects with a thrombopoietin gene mutation. Blood. 2009 Aug 20, 114(8):1655-7
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Red
- NHS GMS
- Illumina TruGenome Clinical Sequencing Services
- Radboud University Medical Center, Nijmegen
- Expert list
- Emory Genetics Laboratory
- UKGTN
- Phenotypes
-
- Thrombocythemia 1 187950 (rare presentation with congenital limb defects)
- OMIM
- 600044
- Clinvar variants
- Variants in THPO
- Penetrance
- Complete
- Publications
- Mode of Pathogenicity
- Other - please provide details in the comments
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: thpo has been classified as Red List (Low Evidence).
Set Phenotypes, Set publications
Eleanor Williams (Genomics England Curator)Added phenotypes Thrombocythemia 1 187950 (rare presentation with congenital limb defects) for gene: THPO Publications for gene THPO were changed from 22453305; 19553636 to 19553636; 22453305
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to THPO. Rating Changed from Green List (high evidence) to Green List (high evidence)
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set mode of pathogenicity
Sarah Leigh (Genomics England Curator)Mode of pathogenicity for THPO was changed to Other - please provide details in the comments
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for THPO were set to Thrombocythemia 1 187950 (rare presentation with congenital limb defects)
Set Mode of Inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for THPO was changed to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Upload gene information
Sarah Leigh (Genomics England Curator)THPO was added to Unexplained skeletal dysplasiapanel. Sources: Emory Genetics Laboratory,Expert list,Illumina TruGenome Clinical Sequencing Services,Radboud University Medical Center, Nijmegen,UKGTN
Set publications
Sarah Leigh (Genomics England Curator)Publications for THPO were set to 22453305; 19553636
Set publications
Sarah Leigh (Genomics England Curator)Publications for THPO were set to 22453305;
Added New Source
Sarah Leigh (Genomics England Curator)THPO was added to Unexplained skeletal dysplasiapanel. Sources:
Created
Sarah Leigh (Genomics England Curator)THPO was created by sleigh