Early onset or syndromic epilepsy
Gene: SLC16A2EnsemblGeneIds (GRCh38): ENSG00000147100
EnsemblGeneIds (GRCh37): ENSG00000147100
OMIM: 300095, Gene2Phenotype
SLC16A2 is in 13 panels
8 reviews
Helen Lord (Oxford Medical Genetics Laboratories)
Frints et al 2008 (18398436) - de novo translocation in female interrupting this gene had AHDS.Created: 5 Sep 2019, 2:22 p.m. | Last Modified: 5 Sep 2019, 2:22 p.m.
Panel Version: 1.261
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Rebecca Foulger (Genomics England curator)
Comment on mode of inheritance: Updated Mode of Inheritance from XLR to XLD based on post-Webex review by Helen Lord.Created: 7 Sep 2019, 11:56 a.m. | Last Modified: 7 Sep 2019, 11:56 a.m.
Panel Version: 1.296
Mode of inheritance collated by Helen Lord (Oxford University Hospitals NHS Foundation Trust, 2019_08_30) on behalf of West Midlands, Oxford and Wessex GLH for GMS Neurology specialist test group. This gene is part of a subset where the mode of inheritance was re-reviewed following the group Webex call on 2019_08_08 for Clinical Indication R59 Early onset or syndromic epilepsy. No rating was included in the review, so I have uploaded a Green rating to match the original West Midlands, Oxford and Wessex GLH rating.Created: 5 Sep 2019, 2:26 p.m. | Last Modified: 5 Sep 2019, 2:26 p.m.
Panel Version: 1.262
Comment on mode of inheritance: MOI is recorded as hemizygous in Gene2Phenotype and XL in OMIM. XLR inheritance was confirmed with reviewer, as stated by Ellen McDonagh.Created: 13 Aug 2019, 1:17 p.m. | Last Modified: 13 Aug 2019, 1:17 p.m.
Panel Version: 1.210
Review and rating collated by Tracy Lester (Oxford Medical Genetics Laboratories Oxford University Hospitals NHS Foundation Trust, 2019_02_06) on behalf of Wessex and West Midlands GLH for GMS Neurology specialist test group, for Clinical Indication R59 'Early onset or syndromic epilepsy'. Review contributors: John Taylor and Helen Lord. Suggested gene rating: Green.Created: 6 Aug 2019, 8:38 p.m. | Last Modified: 6 Aug 2019, 8:38 p.m.
Panel Version: 1.189
Tracy Lester (Genetics laboratory, Oxford UK)
XL Allan-Herndon-Dudley syndrome. Epilepsy not a reported feature on OMIM, however 25% in gene reviews.Created: 6 Aug 2019, 8:31 p.m. | Last Modified: 6 Aug 2019, 8:31 p.m.
Panel Version: 1.188
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
Allan-Herndon-Dudley syndrome, 300523
Publications
Amy McTague (UCL Institute of Child Health)
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
Allan-Herndon-Dudley syndrome
Publications
- Maranduba et al (2006) J Med Genet 43: 457_460
Variants in this GENE are reported as part of current diagnostic practice
Natalie Trump (NHS - Great Ormond Street Hospital)
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
Allan-Herndon-Dudley syndrome
Publications
- Maranduba et al (2006) J Med Genet 43: 457_460
Variants in this GENE are reported as part of current diagnostic practice
Manju Kurian (UCL-Institute of Child Health)
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
Allan-Herndon-Dudley syndrome
Publications
- Maranduba et al (2006) J Med Genet 43: 457_460
Variants in this GENE are reported as part of current diagnostic practice
Richard Scott (North Thames GMC/UCL)
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
Allan-Herndon-Dudley syndrome
Publications
- Maranduba et al (2006) J Med Genet 43: 457 460
Variants in this GENE are reported as part of current diagnostic practice
Ellen McDonagh (Genomics England Curator)
Comment on mode of inheritance: Confirmed with reviewer.Created: 29 Jan 2016, 5:16 p.m.
Comment on mode of inheritance: X-linked dominant in OMIM, hemizygous (X-linked recessive) in G2P.Created: 29 Jan 2016, 2:46 p.m.
Details
- Mode of Inheritance
- X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
- Sources
-
- Expert Review Green
- Wessex and West Midlands GLH
- NHS GMS
- Victorian Clinical Genetics Services
- UKGTN
- Phenotypes
-
- Allan-Herndon-Dudley syndrome, OMIM:300523
- OMIM
- 300095
- Clinvar variants
- Variants in SLC16A2
- Penetrance
- None
- Publications
- Panels with this gene
-
- White matter disorders and cerebral calcification - narrow panel
- Early onset or syndromic epilepsy
- Hereditary spastic paraplegia
- DDG2P
- Intellectual disability
- Adult onset hereditary spastic paraplegia
- Inherited white matter disorders
- Fetal anomalies
- Congenital hypothyroidism
- Hyperthyroidism
- Adult onset neurodegenerative disorder
- Childhood onset hereditary spastic paraplegia
- Childhood onset dystonia, chorea or related movement disorder
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: SLC16A2 were changed from Allan-Herndon-Dudley syndrome, 300523; AHDS to Allan-Herndon-Dudley syndrome, OMIM:300523
Entity classified by Genomics England curator
Rebecca Foulger (Genomics England curator)Gene: slc16a2 has been classified as Green List (High Evidence).
Set mode of inheritance
Rebecca Foulger (Genomics England curator)Mode of inheritance for gene: SLC16A2 was changed from X-LINKED: hemizygous mutation in males, biallelic mutations in females to X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for gene: SLC16A2 were changed from Allan-Herndon-Dudley syndrome, 300523 to Allan-Herndon-Dudley syndrome, 300523; AHDS
Set publications
Rebecca Foulger (Genomics England curator)Publications for gene: SLC16A2 were set to 27212794; 15980113
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for gene: SLC16A2 were changed from Allan-Herndon-Dudley syndrome to Allan-Herndon-Dudley syndrome, 300523
Set publications
Rebecca Foulger (Genomics England curator)Publications for gene: SLC16A2 were set to Maranduba et al (2006) J Med Genet 43: 457_460
Set mode of inheritance
Rebecca Foulger (Genomics England curator)Mode of inheritance for gene: SLC16A2 was changed from X-LINKED: hemizygous mutation in males, biallelic mutations in females to X-LINKED: hemizygous mutation in males, biallelic mutations in females
Added New Source
Rebecca Foulger (Genomics England curator)Source Wessex and West Midlands GLH was added to SLC16A2.
Added New Source
Rebecca Foulger (Genomics England curator)Source NHS GMS was added to SLC16A2.
Panel promoted to version 1.0
Sarah Leigh (Genomics England Curator)Ellen McDonagh: Comment on mode of inheritance
Added New Source
Sarah Leigh (Genomics England Curator)Victorian Clinical Genetics Services was added to SLC16A2. Panel: Genetic Epilepsy Syndromes
Added New Source
Sarah Leigh (Genomics England Curator)SLC16A2 was added to Genetic Epilepsy Syndromes panel. Sources: Expert Review Green,UKGTN
Created
Sarah Leigh (Genomics England Curator)SLC16A2 was created by Sarah Leigh