Adult onset neurodegenerative disorder
STR: AR_CAGGRCh37 Position: 66765160-66765225
GRCh38 Position: 67545316-67545383
Repeated Sequence: CAG
Normal Number of Repeats: < 35
Pathogenic Number of Repeats: = or > 38
AR (androgen receptor)
EnsemblGeneIds (GRCh38): ENSG00000169083
EnsemblGeneIds (GRCh37): ENSG00000169083
OMIM: 313700, Gene2Phenotype
AR is in 0 panels
2 reviews
Ivone Leong (Genomics England Curator)
STR repeat lengths have been reviewed and confirmed by the NHS Genomic Medicine Service.Created: 15 Mar 2022, 11:36 a.m. | Last Modified: 15 Mar 2022, 11:36 a.m.
Panel Version: 2.267
Louise Daugherty (Genomics England Curator)
Green rating for STR submitted on behalf of Nick Beauchamp (Sheffield Diagnostic genetics Service), on behalf of Yorkshire and North East GLH for GMS Neurology specialist test group. Indicated that variants are reported as part of the current diagnostic practice.Created: 23 Jul 2019, 4:49 p.m. | Last Modified: 23 Jul 2019, 4:49 p.m.
Panel Version: 1.75
Green rating for STR submitted on behalf of James Polke (North Bristol NHS Trust), also indicated that variants are reported as part of the current diagnostic practice, on behalf of London North GLH for GMS Neurology specialist test group.Created: 24 Apr 2019, 2:04 p.m.
Source PanelApp panels : Amyotrophic lateral sclerosis/motor neuron disease v1.26
Sources: Expert listCreated: 21 Dec 2018, 10:34 a.m.
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
Spinal and bulbar muscular atrophy or Kennedy diseases 313200
Variants in this STR are reported as part of current diagnostic practice
Details
- Name
- AR_CAG
- Chromosome
- X
- GRCh37 Coordinates
- 66765160-66765225
- GRCh38 Coordinates
- 67545316-67545383
- Repeated Sequence
- CAG
- Normal Number of Repeats: <
- 35
- Pathogenic Number of Repeats: = or >
- 38
- Mode of Inheritance
- X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
- Sources
-
- Yorkshire and North East GLH
- NHS GMS
- London North GLH
- Expert Review Green
- Expert list
- Phenotypes
-
- Spinal and bulbar muscular atrophy of Kennedy, OMIM:313200
- Tags
- OMIM
- 313700
- Clinvar variants
- Variants in AR
- Penetrance
- None
History Filter Activity
Changed Normal Number of Repeats
Arina Puzriakova (Genomics England Curator)Normal Number of Repeats for AR_CAG was changed from 34 to 35.
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for STR: AR_CAG were changed from Spinal and bulbar muscular atrophy or Kennedy diseases 313200 to Spinal and bulbar muscular atrophy of Kennedy, OMIM:313200
Added New Source
Louise Daugherty (Genomics England Curator)Source Yorkshire and North East GLH was added to STR: AR_CAG.
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to STR: AR_CAG.
Added New Source
Louise Daugherty (Genomics England Curator)Source London North GLH was added to STR: AR_CAG.
Panel promoted to version 1.0
Louise Daugherty (Genomics England Curator)Louise Daugherty: Source PanelApp panels : Amyot
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Str: ar_cag has been classified as Green List (High Evidence).
Created, Added New Source, Added Tag, Set mode of inheritance, Set Phenotypes
Louise Daugherty (Genomics England Curator)STR: AR_CAG was added STR: AR_CAG was added to Neurodegenerative disorders - adult onset. Sources: Expert list STR tags were added to STR: AR_CAG. Mode of inheritance for STR: AR_CAG was set to X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males) Phenotypes for STR: AR_CAG were set to Spinal and bulbar muscular atrophy or Kennedy diseases 313200