Laterality disorders and isomerism

Gene: AL117258.1

Green List (high evidence)

AL117258.1 (leishmanolysin like peptidase 2)
EnsemblGeneIds (GRCh38): ENSG00000283654
AL117258.1 is in 2 panels

2 reviews

Arina Puzriakova (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.
Created: 10 Dec 2025, 6:03 p.m. | Last Modified: 10 Dec 2025, 6:03 p.m.
Panel Version: 4.8

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

The 'new-gene-name' tag has been added as the HGNC approved symbol for this gene is CIROP. This gene was known by the previous symbol LMLN2.
Created: 16 Apr 2025, 5:06 p.m. | Last Modified: 16 Apr 2025, 5:06 p.m.
Panel Version: 3.22
Comment on list classification: There is sufficient evidence available (13 unrelated families) for the promotion of this gene to green rating in the next GMS update.
Created: 15 Apr 2025, 7:13 p.m. | Last Modified: 15 Apr 2025, 7:13 p.m.
Panel Version: 3.22
PMID:34903892 reported the identification of biallelic variants (either homozygous or compound heterozygous ) in the CIROP gene in 21 patients from 12 unrelated families of different geographic origin with congenital heterotaxy. There were a total of nine variants identified in these patients - 5 missense, 2 nonsense, a frameshift, and a small in-frame deletion. The disorder is characterised by defects in the asymmetric positioning of visceral organs across the left-right axis, known as laterality defects. Functional studies performed on Zebrafish and Xenopus knockout models replicated the heterotaxy phenotype. They also showed that CIROP was essential for left side symmetry and is expressed in ciliated left–right organisers.

PMID:39513328 reported a cohort of 24 patients with heterotaxy from 19 unrelated families, of which two patients from a family were identified with homozygous missense CIROP variant.

This gene has been associated with relevant phenotypes in OMIM (MIM #619702), but not in Gene2Phenotype.
Sources: Literature
Created: 15 Apr 2025, 7:11 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Heterotaxy, visceral, 12, autosomal, OMIM:619702

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Literature
Phenotypes
  • Heterotaxy, visceral, 12, autosomal, OMIM:619702
Tags
new-gene-name gene-checked
Clinvar variants
Variants in AL117258.1
Penetrance
None
Publications
Panels with this gene

History Filter Activity

10 Dec 2025, Gel status: 3

Removed Tag

Arina Puzriakova (Genomics England Curator)

Tag Q2_25_ promote_green was removed from gene: AL117258.1.

10 Dec 2025, Gel status: 3

Added New Source, Added New Source, Status Update

Arina Puzriakova (Genomics England Curator)

Source NHS GMS was added to AL117258.1. Source Expert Review Green was added to AL117258.1. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

16 Apr 2025, Gel status: 2

Added Tag, Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag new-gene-name tag was added to gene: AL117258.1. Tag gene-checked tag was added to gene: AL117258.1.

15 Apr 2025, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: al117258.1 has been classified as Amber List (Moderate Evidence).

15 Apr 2025, Gel status: 1

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_25_ promote_green tag was added to gene: AL117258.1.

15 Apr 2025, Gel status: 1

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

gene: AL117258.1 was added gene: AL117258.1 was added to Laterality disorders and isomerism. Sources: Literature Mode of inheritance for gene: AL117258.1 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: AL117258.1 were set to 34903892; 39513328 Phenotypes for gene: AL117258.1 were set to Heterotaxy, visceral, 12, autosomal, OMIM:619702 Review for gene: AL117258.1 was set to GREEN