Laterality disorders and isomerism
Gene: SPAG1EnsemblGeneIds (GRCh38): ENSG00000104450
EnsemblGeneIds (GRCh37): ENSG00000104450
OMIM: 603395, Gene2Phenotype
SPAG1 is in 7 panels
2 reviews
Matthew Edwards (Clinical Genetics & Genomics Lab, Royal Brompton & Harefield NHS Trust)
On CGGL Royal Brompton panel. Good but limited literature evidence (single ref)
SPAG1 encodes a protein involved in the cytoplasmic assembly of ciliary dynein arms. Pathogenic variants are a cause of autosomal recessive PCD, and loss of function is the main disease mechanism (Knowles et al 2013 Am J Hum Genet 93(4):711-720).Created: 25 Nov 2019, 11:22 p.m. | Last Modified: 25 Nov 2019, 11:22 p.m.
Panel Version: 0.51
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
OMIM 615505 Ciliary dyskinesia, primary, 28
Publications
Variants in this GENE are reported as part of current diagnostic practice
Louise Daugherty (Genomics England Curator)
Initial gene list and info collated by Ian Berry Leeds Genetics Laboratory November 2018 on behalf of the GMS Respiratory specialist test group. Gene Symbol submitted: SPAG1; Suggested initial gene rating: Green; Evidence for inclusion: OMIM PCD or Visceral heterotaxy gene; Evidence for exclusion: none given; Technical notes (e.g. non-coding/CNV mutations requiring coverage?): none givenCreated: 5 Dec 2018, 12:52 p.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- Phenotypes
-
- Ciliary dyskinesia, primary, 28, 615505
- OMIM
- 603395
- Clinvar variants
- Variants in SPAG1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: SPAG1 were changed from to Ciliary dyskinesia, primary, 28, 615505
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: SPAG1 were set to
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for gene: SPAG1 was changed from to BIALLELIC, autosomal or pseudoautosomal
Added New Source, Status Update
Louise Daugherty (Genomics England Curator)Source Expert Review Green was added to SPAG1. Rating Changed from Red List (low evidence) to Green List (high evidence)
Created, Added New Source, Set mode of inheritance
Louise Daugherty (Genomics England Curator)gene: SPAG1 was added gene: SPAG1 was added to Laterality disorders and isomerism. Sources: NHS GMS Mode of inheritance for gene: SPAG1 was set to