Hereditary neuropathy or pain disorder
Gene: ARSAEnsemblGeneIds (GRCh38): ENSG00000100299
EnsemblGeneIds (GRCh37): ENSG00000100299
OMIM: 607574, Gene2Phenotype
ARSA is in 20 panels
3 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.Created: 24 Feb 2025, 5:02 p.m. | Last Modified: 24 Feb 2025, 5:02 p.m.
Panel Version: 6.148
ARSA variants are associated with Metachromatic leukodystrophy (OMIM:250100) and as definitive Gen2Phen gene for ARSA-related arylsulfatase A deficiency. Numerous ARSA variants have been reported in numerous unrelated cases of OMIM:250100 (PMID: 1670590; 9600244; 1673291; 1684088).Created: 29 Aug 2024, 4:24 p.m. | Last Modified: 29 Aug 2024, 4:24 p.m.
Panel Version: 5.13
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Publications
Louise Daugherty (Genomics England Curator)
Gene rated as Amber : From feedback from Genomics England Clinical team (Anna de Burca and Meriel McEntagart). Extension of panel scope - syndrome with non-neurological features / Metachromatic leukodystrophy - broader phenotypeCreated: 6 Dec 2019, 1:58 p.m. | Last Modified: 6 Dec 2019, 1:58 p.m.
Panel Version: 0.28
Comment on list classification: This gene has changed ratings because the panel for R78 was going to be a broad panel (to include conditions where neuropathy is part of a more complex phenotype or where there is overlap with another neurological presentation eg. HSP) but subsequently during the follow up call on 21st June with the Test Group it was agreed that it was more clinically relevant for R78 to be restricted to genes that are associated with isolated neuropathy, which this panel represents. For genes that represent the broader phenotype see https://panelapp.genomicsengland.co.uk/panels/85/.Created: 6 Dec 2019, 1:57 p.m. | Last Modified: 6 Dec 2019, 1:57 p.m.
Panel Version: 0.28
Review and rating uploaded from file (Curation_Template_GMS_Neuro_AR_20190521.xlsx) submitted by Alex Rossor (UCL Institute of Neurology) on behalf of London North GLH for GMS Neurology specialist test group.Created: 11 Jun 2019, 1:40 p.m.
Alexander Rossor (UCL Institute of Neurology)
Now a broad panel so this gene should be includedin R78Created: 15 Oct 2024, 10:17 p.m. | Last Modified: 15 Oct 2024, 10:17 p.m.
Panel Version: 5.19
Peripheral neuropathy is a well recognised feature of metachromatic leukodystrophyCreated: 9 Jul 2024, 9:26 p.m. | Last Modified: 9 Jul 2024, 9:26 p.m.
Panel Version: 4.11
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Metachromatic leukodystrophy. Severe late infantile form with mental retardation and severe course. Regression before 30 months; adult onset, psychiatric symptoms, leukodystrophy on MRI, progressive neuropathy with SNCV, optic atrophy
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- London North GLH
- NHS GMS
- NHS GMS
- London North GLH
- Phenotypes
-
- Metachromatic leukodystrophy, OMIM:250100
- metachromatic leukodystrophy, juvenile form, MONDO:0009591
- OMIM
- 607574
- Clinvar variants
- Variants in ARSA
- Penetrance
- None
- Publications
- Panels with this gene
-
- Lysosomal storage disorder
- Childhood onset dystonia, chorea or related movement disorder
- White matter disorders and cerebral calcification - narrow panel
- Hereditary neuropathy
- Adult onset dystonia, chorea or related movement disorder
- DDG2P
- Intellectual disability
- Adult onset leukodystrophy
- Inherited white matter disorders
- Hyperammonaemia
- Adult onset neurodegenerative disorder
- Likely inborn error of metabolism
- Hereditary ataxia with onset in adulthood
- Parkinson Disease and Complex Parkinsonism
- Early onset dystonia
- Ataxia and cerebellar anomalies - narrow panel
- Hereditary ataxia
- Fetal anomalies
- Hereditary neuropathy or pain disorder
- Undiagnosed metabolic disorders
History Filter Activity
Removed Tag, Removed Tag
Sarah Leigh (Genomics England Curator)Tag Q3_24_promote_green was removed from gene: ARSA. Tag Q3_24_NHS_review was removed from gene: ARSA.
Added New Source, Status Update
Sarah Leigh (Genomics England Curator)Source Expert Review Green was added to ARSA. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Added Tag, Added Tag
Sarah Leigh (Genomics England Curator)Tag Q3_24_promote_green tag was added to gene: ARSA. Tag Q3_24_NHS_review tag was added to gene: ARSA.
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: ARSA were set to
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for gene: ARSA were changed from Severe late infantile form with mental retardation and severe course. Regression before 30 months; adult onset, psychiatric symptoms, leukodystrophy on MRI, progressive neuropathy with SNCV, optic atrophy; Metachromatic leukodystrophy, 250100 to Metachromatic leukodystrophy, OMIM:250100; metachromatic leukodystrophy, juvenile form, MONDO:0009591
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Gene: arsa has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set Phenotypes
Ellen McDonagh (Genomics England Curator)gene: ARSA was added gene: ARSA was added to Hereditary neuropathy NOT PMP22 copy number. Sources: NHS GMS,London North GLH Mode of inheritance for gene: ARSA was set to BIALLELIC, autosomal or pseudoautosomal Phenotypes for gene: ARSA were set to Severe late infantile form with mental retardation and severe course. Regression before 30 months; adult onset, psychiatric symptoms, leukodystrophy on MRI, progressive neuropathy with SNCV, optic atrophy; Metachromatic leukodystrophy, 250100