Hereditary neuropathy or pain disorder
Gene: FA2HEnsemblGeneIds (GRCh38): ENSG00000103089
EnsemblGeneIds (GRCh37): ENSG00000103089
OMIM: 611026, Gene2Phenotype
FA2H is in 17 panels
4 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.Created: 24 Feb 2025, 5:02 p.m. | Last Modified: 24 Feb 2025, 5:02 p.m.
Panel Version: 6.148
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Eleanor Williams (Genomics England Curator)
Comment on list classification: Promoting with amber with a recommendation for green rating as there are now 4 cases with peripheral neuropathy and variants in this gene reported.Created: 26 Oct 2024, 9:45 p.m. | Last Modified: 26 Oct 2024, 9:45 p.m.
Panel Version: 5.98
Associated with Spastic paraplegia 35, autosomal recessive in OMIM (OMIM:612319)
Peripheral neuropathy reported in 4 cases - 1 from PubMed:22146942 and 3 from PubMed:31135052
PubMed:22146942 - Pierson et al 2012 - describe a 10-year-old male, from a non-consanguineous family, with progressive spastic paraplegia, dystonia, ataxia, and cognitive decline associated with a sural axonal neuropathy. The patient has a paternally derived missense mutation and an overlapping novel maternally derived ~28-kb genomic deletion in FA2H.
PubMed:31135052 - Rattay et al 2019 - studied 19 cases from 16 families with biallelic FA2H mutations resulting in hereditary spastic paraplegia (HSP) type SPG35. Variants in FA2H were identified by Sanger sequencing, a next generation sequencing (NGS)-based HSP gene panel and whole exome sequencing. Truncating variants and missense variants were identified. Gait problems started almost invariably in early childhood at a median age of 4 years. Lower limb predominant spastic tetraparesis accompanied by truncal instability, dysarthria, dysphagia, cerebellar ataxia, and cognitive deficits were present in ∼90% of cases. Peripheral neuropathy was present in 27% (3/11) of cases.Created: 26 Oct 2024, 9:43 p.m. | Last Modified: 26 Oct 2024, 9:43 p.m.
Panel Version: 5.97
Phenotypes
Spastic paraplegia 35, autosomal recessive, OMIM:612319; hereditary spastic paraplegia 35, MONDO:0012866
Publications
Louise Daugherty (Genomics England Curator)
Review and rating uploaded from file (Curation_Template_GMS_Neuro_AR_20190521.xlsx) submitted by Alex Rossor (UCL Institute of Neurology) on behalf of London North GLH for GMS Neurology specialist test group.Created: 11 Jun 2019, 1:40 p.m.
Alexander Rossor (UCL Institute of Neurology)
peripheral neuropathy now reportedin 3 additional patientsCreated: 19 Oct 2024, 10:34 p.m. | Last Modified: 19 Oct 2024, 10:34 p.m.
Panel Version: 5.19
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
SPG35, Childhood onset spasticity, cognitive decline and leukodystrophy. Mild sensory axonal neuropathy on NCS. Epilepsy, dysphagia, dysarthria and dystonia also observed.
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- London North GLH
- NHS GMS
- NHS GMS
- London North GLH
- Phenotypes
-
- Spastic paraplegia 35, autosomal recessive, OMIM:612319
- hereditary spastic paraplegia 35, MONDO:0012866
- OMIM
- 611026
- Clinvar variants
- Variants in FA2H
- Penetrance
- None
- Publications
- Panels with this gene
-
- Adult onset hereditary spastic paraplegia
- Hereditary neuropathy or pain disorder
- Undiagnosed metabolic disorders
- White matter disorders and cerebral calcification - narrow panel
- Childhood onset hereditary spastic paraplegia
- Intellectual disability
- Childhood onset dystonia, chorea or related movement disorder
- Structural basal ganglia disorders
- Hereditary neuropathy
- Adult onset dystonia, chorea or related movement disorder
- Mitochondrial disorders
- Inherited white matter disorders
- Adult onset neurodegenerative disorder
- Likely inborn error of metabolism
- Early onset dystonia
- Ataxia and cerebellar anomalies - narrow panel
- Hereditary spastic paraplegia
History Filter Activity
Removed Tag, Removed Tag
Sarah Leigh (Genomics England Curator)Tag Q3_24_promote_green was removed from gene: FA2H. Tag Q3_24_NHS_review was removed from gene: FA2H.
Added New Source, Status Update
Sarah Leigh (Genomics England Curator)Source Expert Review Green was added to FA2H. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Set Phenotypes
Eleanor Williams (Genomics England Curator)Phenotypes for gene: FA2H were changed from SPG35, Childhood onset spasticity, cognitive decline and leukodystrophy. Mild sensory axonal neuropathy on NCS. Epilepsy, dysphagia, dysarthria and dystonia also observed; Spastic paraplegia 35, autosomal recessive, 612319 to Spastic paraplegia 35, autosomal recessive, OMIM:612319; hereditary spastic paraplegia 35, MONDO:0012866
Set publications
Eleanor Williams (Genomics England Curator)Publications for gene: FA2H were set to 22146942
Added Tag, Added Tag
Eleanor Williams (Genomics England Curator)Tag Q3_24_promote_green tag was added to gene: FA2H. Tag Q3_24_NHS_review tag was added to gene: FA2H.
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: fa2h has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Ellen McDonagh (Genomics England Curator)gene: FA2H was added gene: FA2H was added to Hereditary neuropathy NOT PMP22 copy number. Sources: NHS GMS,London North GLH Mode of inheritance for gene: FA2H was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: FA2H were set to 22146942 Phenotypes for gene: FA2H were set to SPG35, Childhood onset spasticity, cognitive decline and leukodystrophy. Mild sensory axonal neuropathy on NCS. Epilepsy, dysphagia, dysarthria and dystonia also observed; Spastic paraplegia 35, autosomal recessive, 612319