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Hereditary neuropathy or pain disorder

Gene: TYMP

Green List (high evidence)
TYMP (thymidine phosphorylase)
EnsemblGeneIds (GRCh38): ENSG00000025708
EnsemblGeneIds (GRCh37): ENSG00000025708
OMIM: 131222, Gene2Phenotype
TYMP is in 16 panels

8 reviews

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.
Created: 26 Sep 2024, 1:11 p.m. | Last Modified: 26 Sep 2024, 1:11 p.m.
Panel Version: 5.16

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Created: 26 Sep 2024, 1:11 p.m.
Last Modified: 26 Sep 2024, 1:11 p.m.
Panel version: 5.16

Sarah Leigh (Genomics England Curator)

Green List (high evidence)

Numerous TYMP variants have been associated with Mitochondrial DNA depletion syndrome 1 (MNGIE type), OMIM:603041, which includes peripheral neuropathy as one of the clinical features.
Created: 13 May 2024, 8:57 a.m. | Last Modified: 13 May 2024, 8:57 a.m.
Panel Version: 4.11

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Mitochondrial DNA depletion syndrome 1 (MNGIE type), OMIM:603041

Publications

Created: 13 May 2024, 8:57 a.m.
Last Modified: 13 May 2024, 8:57 a.m.
Panel version: 4.11

Louise Daugherty (Genomics England Curator)

I don't know

This gene has changed ratings because the panel for R78 was going to be a broad panel (to include conditions where neuropathy is part of a more complex phenotype or where there is overlap with another neurological presentation eg. HSP) but subsequently during the follow up call on 21st June with the Test Group it was agreed that it was more clinically relevant for R78 to be restricted to genes that are associated with isolated neuropathy, which this panel represents. For genes that represent the broader phenotype see https://panelapp.genomicsengland.co.uk/panels/85/.
Created: 6 Dec 2019, 8:30 p.m. | Last Modified: 6 Dec 2019, 8:30 p.m.
Panel Version: 0.68
Comment on list classification: Gene included in a list of complex neuropathy syndrome genes recommended to be downgraded for R78 panel (list submitted by Alex Rossor 15th July 2019)
Created: 6 Dec 2019, 8:30 p.m. | Last Modified: 6 Dec 2019, 8:30 p.m.
Panel Version: 0.68
Rating and review submitted on behalf of James Polke (Neurogenetics Laboratory,Institute of Neurology, London), on behalf of London North GLH for GMS Neurology specialist test group.
Created: 9 May 2019, 5 p.m.
Created: 29 Apr 2019, 9:26 a.m.

Panel version: 0.68

James Polke (Neurogenetics Laboratory, Institute of Neurology, London)

Green List (high evidence)

Created: 29 Apr 2019, 9:20 a.m.

Panel version: Imported from Hereditary neuropathy panel version 1.52

Ellen McDonagh (Genomics England Curator)

Comment on list classification: Promoted from red to green due to agreement from 3 reviewers.
Created: 5 May 2016, 2:51 p.m.
Created: 5 May 2016, 2:51 p.m.

Panel version: Imported from Hereditary neuropathy panel version 0.132

Rita Horvath (Institute of Genetic Medicine, Newcastle University)

Green List (high evidence)

neuropathy is common
Created: 9 Dec 2015, 4:49 p.m.

Variants in this GENE are reported as part of current diagnostic practice

Created: 9 Dec 2015, 4:49 p.m.

Panel version: Imported from Hereditary neuropathy panel version 0

Alexander Rossor (UCL Institute of Neurology)

Green List (high evidence)

Can present with neuropathy and should be included in R78 panel
Created: 17 Mar 2024, 9:45 p.m. | Last Modified: 17 Mar 2024, 9:45 p.m.
Panel Version: 3.83
MNGIE
Created: 9 Dec 2015, 8:50 a.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Publications

Created: 9 Dec 2015, 8:50 a.m.

Panel version: 3.83

Mary Reilly (Institute of Neurology)

Green List (high evidence)

MNGIE
Created: 8 Dec 2015, 3:06 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Created: 8 Dec 2015, 3:06 p.m.

Panel version: Imported from Hereditary neuropathy panel version 0

History Filter Activity

26 Sep 2024, Gel status: 3

Removed Tag, Removed Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_24_promote_green was removed from gene: TYMP. Tag Q2_24_NHS_review was removed from gene: TYMP.

26 Sep 2024, Gel status: 3

Added New Source, Status Update

Achchuthan Shanmugasundram (Genomics England Curator)

Source Expert Review Green was added to TYMP. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

13 May 2024, Gel status: 2

Added Tag, Added Tag

Sarah Leigh (Genomics England Curator)

Tag Q2_24_promote_green tag was added to gene: TYMP. Tag Q2_24_NHS_review tag was added to gene: TYMP.

6 Dec 2019, Gel status: 2

Entity classified by Genomics England curator

Louise Daugherty (Genomics England Curator)

Gene: tymp has been classified as Amber List (Moderate Evidence).

5 Dec 2019, Gel status: 3

Created, Added New Source, Set mode of inheritance, Set Phenotypes

Ellen McDonagh (Genomics England Curator)

gene: TYMP was added gene: TYMP was added to Hereditary neuropathy NOT PMP22 copy number. Sources: NHS GMS,London North GLH,Expert Review Green,Expert list Mode of inheritance for gene: TYMP was set to BIALLELIC, autosomal or pseudoautosomal Phenotypes for gene: TYMP were set to Mitochondrial DNA depletion syndrome 1 (MNGIE type)