Hereditary neuropathy
Gene: PDK3EnsemblGeneIds (GRCh38): ENSG00000067992
EnsemblGeneIds (GRCh37): ENSG00000067992
OMIM: 300906, Gene2Phenotype
PDK3 is in 6 panels
7 reviews
Louise Daugherty (Genomics England Curator)
Review and rating submitted by Natalie Forrester (SWGLH - Bristol Genetics) on behalf of South West GLH for GMS Neurology specialist test group.Created: 29 Apr 2019, 12:53 p.m.
Natalie Forrester (SWGLH - Bristol Genetics)
2 families and some functional work. PMID: 23297365 (Kennerson et al, 2013) Australian family appears to segregateand some functional work; PMID: 26801680 (Kennerson et al, 2016) Korean familyCreated: 29 Apr 2019, 12:30 p.m.
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
?Charcot Marie Tooth disease, X linked dominant, 6, 300905
Publications
Variants in this GENE are reported as part of current diagnostic practice
Rita Horvath (Institute of Genetic Medicine, Newcastle University)
Richard Scott (Genomics England Curator)
Comment on list classification: Await further evidence before promote to green listCreated: 8 Jul 2016, 4:01 a.m.
Ellen McDonagh (Genomics England Curator)
Comment on publications: Two families have now been reported with the p.R158H mutation, though this is still not enough evidence to be rated green, with only one known Charcot-Marie-Tooth disease-causing variant in this gene reported to date.Created: 5 May 2016, 9:22 a.m.
Comment on mode of inheritance: Seems to be X-linked dominant (monoallelic mutations in females could cause the disorder).Created: 5 May 2016, 9:19 a.m.
Alexander Rossor (UCL Institute of Neurology)
Now 2 families, likely pathogenicCreated: 16 May 2019, 4:21 p.m.
Single familyCreated: 9 Dec 2015, 8:50 a.m.
Mode of inheritance
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Mary Reilly (Institute of Neurology)
Single familyCreated: 8 Dec 2015, 3:06 p.m.
Mode of inheritance
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Details
- Mode of Inheritance
- X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
- Sources
-
- London North GLH
- NHS GMS
- South West GLH
- Expert Review Red
- Radboud University Medical Center, Nijmegen
- Phenotypes
-
- ?Charcot Marie Tooth disease, X linked dominant, 6, 300905
- ?Charcot Marie Tooth disease, X linked dominant, 6, 300905
- OMIM
- 300906
- Clinvar variants
- Variants in PDK3
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Added New Source
Louise Daugherty (Genomics England Curator)Source London North GLH was added to PDK3.
Set Phenotypes, Set publications
Louise Daugherty (Genomics England Curator)Added phenotypes ?Charcot Marie Tooth disease, X linked dominant, 6, 300905 for gene: PDK3 Publications for gene PDK3 were changed from PMID: 23297365 (Kennerson et al, 2013) Australian family; PMID: 26801680 (Kennerson et al, 2016) Korean family to 26801680; 23297365
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to PDK3.
Added New Source
Louise Daugherty (Genomics England Curator)Source South West GLH was added to PDK3.
Gene classified by Genomics England curator
Richard Scott (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Mode of inheritance for PDK3 was changed to X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Set publications
Ellen McDonagh (Genomics England Curator)Publications for PDK3 were set to PMID: 23297365 (Kennerson et al, 2013) Australian family; PMID: 26801680 (Kennerson et al, 2016) Korean family
Set publications
Ellen McDonagh (Genomics England Curator)Publications for PDK3 were set to PMID: 23297365 (Kennerson et al, 2013) Australian family; PMID: 26801680 (Kennerson et al, 2016) Korean family
Added New Source
Ellen McDonagh (Genomics England Curator)PDK3 was added to Charcot-Marie-Tooth diseasepanel. Sources: Radboud University Medical Center, Nijmegen