Genes in panel
- AAAS 1
- ABAT 1
- ABCB7 1
- ABCC9 1
- ABCD1 1
- ABHD12 1
- ABHD5 1
- ACAD9 1
- ACADM 1
- ACADS 1
- ACADVL 1
- ACAT1 1
- ACOX1 1
- ACTB 1
- ACTG1 1
- ACY1 1
- ADAR 1
- ADCY5 1
- ADGRG1 2
- ADGRV1 2
- ADNP 1
- ADSL 1
- AFF2 1
- AFF4 1
- AFG3L2 1
- AGA 1
- AGK 1
- AGL 1
- AGPS 1
- AGXT 1
- AHDC1 1
- AIRE 1
- AKR1D1 1
- AKT1 1
- ALAD 1
- ALDH18A1 1
- ALDH1A3 1
- ALDH3A2 1
- ALDH4A1 1
- ALDH5A1 1
- ALDH7A1 1
- ALDOA 1
- ALDOB 1
- ALG1 1
- ALG12 1
- ALG3 1
- ALG6 1
- ALG8 1
- ALMS1 1
- ALPL 1
- ALS2 1
- ALX1 1
- ALX3 1
- AMER1 2
- AMPD2 1
- AMT 1
- ANKH 1
- ANKRD11 1
- ANO10 1
- ANO3 1
- ANO5 1
- ANTXR1 1
- AP1S2 1
- AP4B1 1
- AP4E1 1
- AP4M1 1
- AP4S1 1
- AP5Z1 1
- APOPT1 2
- APTX 1
- AR 1
- ARFGEF2 1
- ARG1 1
- ARHGEF9 1
- ARID1A 1
- ARID1B 1
- ARL6 1
- ARSA 1
- ARSB 1
- ARSE 2
- ARX 1
- ASAH1 1
- ASL 1
- ASPA 1
- ASPM 1
- ASS1 1
- ASXL1 1
- ATCAY 1
- ATIC 1
- ATL1 1
- ATM 1
- ATN1 1
- ATP13A2 1
- ATP1A3 1
- ATP6AP2 1
- ATP7A 1
- ATP7B 1
- ATP8B1 1
- ATRX 1
- ATXN1 1
- ATXN10 1
- ATXN2 1
- ATXN3 1
- ATXN7 1
- AUH 1
- AUTS2 1
- B3GALT6 1
- B4GALNT1 1
- B4GALT7 1
- BBS1 1
- BBS10 1
- BBS12 1
- BBS2 1
- BBS4 1
- BBS5 1
- BBS7 1
- BBS9 1
- BCAP31 1
- BCKDHA 1
- BCKDHB 1
- BCL11A 1
- BCOR 1
- BCS1L 1
- BEAN1 1
- BICD2 1
- BIN1 1
- BLM 1
- BMP4 1
- BMPER 1
- BRAF 1
- BRAT1 1
- BRCA1 1
- BRCA2 1
- BRIP1 1
- BRWD3 1
- BSCL2 1
- BSND 1
- BTD 1
- BUB1B 1
- C12orf65 2
- C19orf12 1
- C2orf71 2
- C5orf42 2
- C9orf72 1
- CA2 1
- CA8 1
- CACNA1A 1
- CACNA1S 1
- CACNB4 1
- CAMTA1 1
- CASK 1
- CASR 1
- CBL 1
- CBS 1
- CC2D1A 1
- CC2D2A 1
- CCBE1 1
- CCDC39 1
- CCDC88C 1
- CCND2 1
- CCT5 1
- CDC6 1
- CDH15 1
- CDK5RAP2 1
- CDKL5 1
- CDKN1C 1
- CDON 1
- CDT1 1
- CENPJ 1
- CEP152 1
- CEP290 1
- CEP41 1
- CEP57 1
- CHAMP1 1
- CHD2 1
- CHD7 1
- CHRNA2 1
- CHRNA4 1
- CHRNB2 1
- CHRNG 1
- CHST14 1
- CHST3 1
- CHUK 1
- CIB2 1
- CISD2 1
- CKAP2L 1
- CLCN2 1
- CLDN19 1
- CLN3 1
- CLN5 1
- CLN6 1
- CLN8 1
- CLPB 1
- CNTNAP2 1
- COASY 1
- COG1 1
- COG4 1
- COG7 1
- COG8 1
- COL11A2 1
- COL1A1 1
- COL2A1 1
- COL4A1 1
- COL4A2 1
- COL4A3BP 2
- COL9A3 1
- COLEC11 1
- COQ2 1
- COQ8A 1
- COQ9 1
- COX10 1
- COX15 1
- COX6B1 1
- COX7B 1
- CP 1
- CPA6 1
- CPS1 1
- CRB1 1
- CRB2 1
- CREBBP 1
- CSF1R 1
- CSPP1 1
- CSTB 1
- CTC1 1
- CTCF 1
- CTDP1 1
- CTNNB1 1
- CTNS 1
- CTSA 1
- CTSD 1
- CUL4B 1
- CUL7 1
- CYC1 1
- CYP27A1 1
- CYP2U1 1
- CYP7B1 1
- DAG1 1
- DARS 2
- DARS2 1
- DBT 1
- DCHS1 1
- DCTN1 1
- DCX 1
- DDC 1
- DDHD1 1
- DDHD2 1
- DDOST 1
- DDR2 1
- DDX11 1
- DDX3X 1
- DEAF1 1
- DEPDC5 1
- DHCR24 1
- DHCR7 1
- DHFR 1
- DIS3L2 1
- DKC1 1
- DLAT 1
- DLD 1
- DLG3 1
- DMD 1
- DMP1 1
- DMPK 1
- DNM2 1
- DNMT1 1
- DNMT3A 1
- DNMT3B 1
- DOCK8 1
- DOLK 1
- DPAGT1 1
- DPM1 1
- DRD2 1
- DYM 1
- DYNC1H1 1
- DYRK1A 1
- EBP 1
- EDNRB 1
- EFHC1 1
- EFNB1 1
- EFTUD2 1
- EGR2 1
- EHMT1 1
- EIF2AK3 1
- EIF4G1 1
- ELAC2 1
- ELOVL4 1
- ELOVL5 1
- EP300 1
- EPG5 1
- EPM2A 1
- ERCC1 1
- ERCC2 1
- ERCC3 1
- ERCC4 1
- ERCC5 1
- ERCC6 1
- ERCC6L2 1
- ERCC8 1
- ERLIN2 1
- ESCO2 1
- ETFA 1
- ETFB 1
- ETFDH 1
- ETHE1 1
- EVC 1
- EVC2 1
- EXOSC3 1
- EXT1 1
- EYA1 1
- EZH2 1
- FA2H 1
- FAH 1
- FAM111A 1
- FAM111B 1
- FAM126A 1
- FAM20C 1
- FANCA 1
- FANCC 1
- FANCD2 1
- FANCE 1
- FAR1 1
- FAT4 1
- FBN1 1
- FBN2 1
- FBP1 1
- FBXL4 1
- FBXO7 1
- FGD1 1
- FGD4 1
- FGF14 1
- FGF3 1
- FGFR1 1
- FGFR2 1
- FGFR3 1
- FH 1
- FHL1 1
- FIG4 1
- FKBP14 1
- FKRP 1
- FKTN 1
- FLNA 1
- FLNB 1
- FLVCR1 1
- FLVCR2 1
- FMR1 1
- FOLR1 1
- FOXG1 1
- FOXP1 1
- FOXP3 1
- FOXRED1 1
- FRAS1 1
- FREM1 1
- FREM2 1
- FRMD7 1
- FTCD 2
- FTL 1
- FTSJ1 1
- FUCA1 1
- FXN 1
- GAA 1
- GABRA1 1
- GABRB3 1
- GABRG2 1
- GAD1 1
- GALC 1
- GALE 1
- GALK1 1
- GALNS 1
- GALT 1
- GAMT 1
- GATA6 1
- GATM 1
- GBA 1
- GBA2 1
- GCDH 1
- GCH1 1
- GDAP1 1
- GDI1 1
- GFAP 1
- GFM1 1
- GHR 1
- GJA1 1
- GJB1 1
- GJC2 1
- GK 1
- GLB1 1
- GLDC 1
- GLE1 1
- GLI2 1
- GLI3 1
- GLIS3 1
- GLUD1 1
- GLUL 1
- GM2A 1
- GMPPA 1
- GMPPB 1
- GNAL 1
- GNAO1 1
- GNAS 1
- GNPAT 1
- GNPTAB 1
- GNPTG 1
- GNS 1
- GOSR2 1
- GPSM2 1
- GRIA3 1
- GRID2 1
- GRIK2 1
- GRIN2A 1
- GRIN2B 1
- GRM1 1
- GRN 1
- GTF2H5 1
- GTPBP3 1
- GUSB 1
- HADH 1
- HADHA 1
- HAX1 1
- HCCS 1
- HCFC1 1
- HCN1 1
- HDAC4 1
- HDAC8 1
- HEXA 1
- HEXB 1
- HGSNAT 1
- HIBCH 1
- HINT1 1
- HK1 1
- HLCS 1
- HMGCL 1
- HMGCS2 1
- HNF1B 1
- HNF4A 1
- HNRNPU 1
- HOXA1 1
- HPRT1 1
- HRAS 1
- HSD17B10 1
- HSD17B4 1
- HSD3B7 1
- HSPD1 1
- HSPG2 1
- HTT 1
- HUWE1 1
- HYAL1 1
- HYLS1 1
- IDS 1
- IDUA 1
- IER3IP1 1
- IFIH1 1
- IFT140 1
- IFT172 1
- IGF1 1
- IGF1R 1
- IGF2 1
- IGHMBP2 1
- IGSF1 1
- IKBKG 1
- IL1RAPL1 1
- INPP5E 1
- IQSEC2 1
- ISPD 2
- ITGA7 1
- ITPR1 1
- IVD 1
- KANSL1 1
- KARS 2
- KAT6A 1
- KAT6B 1
- KBTBD13 1
- KCNA1 1
- KCNA2 1
- KCNB1 1
- KCNC1 1
- KCNC3 1
- KCND3 1
- KCNJ10 1
- KCNJ11 1
- KCNQ2 1
- KCNQ3 1
- KCNT1 1
- KCTD7 1
- KDM5C 1
- KDM6A 1
- KIF11 1
- KIF1A 1
- KIF1BP 2
- KIF1C 1
- KIF5A 1
- KIF7 1
- KIRREL3 1
- KLHL40 1
- KMT2A 1
- KMT2B 1
- KMT2D 1
- KNL1 1
- KRAS 1
- KRIT1 1
- L1CAM 1
- L2HGDH 1
- LAMA1 1
- LAMA2 1
- LAMC3 1
- LAMP2 1
- LARGE1 1
- LBR 1
- LDB3 1
- LGI1 1
- LHX3 1
- LHX4 1
- LIG4 1
- LITAF 1
- LMBRD1 1
- LMNA 1
- LRP2 1
- LRP5 1
- LRPPRC 1
- LRRK2 1
- LYST 1
- MAB21L2 1
- MAF 1
- MAGEL2 1
- MAN2B1 1
- MANBA 1
- MAOA 1
- MAP2K1 1
- MAP2K2 1
- MAPT 1
- MARS2 1
- MASP1 1
- MC2R 1
- MCCC1 1
- MCCC2 1
- MCEE 1
- MCOLN1 1
- MCPH1 1
- MECP2 1
- MED12 1
- MED17 1
- MEF2C 1
- MEGF10 1
- MEGF8 1
- MFSD8 1
- MGAT2 1
- MGP 1
- MICU1 1
- MID1 1
- MITF 1
- MKKS 1
- MKS1 1
- MLC1 1
- MLYCD 1
- MMAA 1
- MMAB 1
- MMACHC 1
- MMADHC 1
- MNX1 1
- MOCS1 1
- MOCS2 1
- MPDU1 1
- MPI 1
- MPLKIP 1
- MPV17 1
- MPZ 1
- MRE11 2
- MT-ATP6 1
- MTHFR 1
- MTM1 1
- MTMR2 1
- MT-ND1 1
- MT-ND4 1
- MTO1 1
- MTPAP 1
- MTR 1
- MTRR 1
- MT-TK 1
- MTTP 1
- MUT 2
- MYBPC1 1
- MYCN 1
- MYH3 1
- MYO5A 1
- MYO7A 1
- NAA10 1
- NAGA 1
- NAGLU 1
- NAGS 1
- NALCN 1
- NBN 1
- NDE1 1
- NDP 1
- NDRG1 1
- NDUFA1 1
- NDUFS1 1
- NDUFS4 1
- NDUFS7 1
- NDUFS8 1
- NDUFV1 1
- NEFL 1
- NEU1 1
- NEXMIF 2
- NF1 1
- NFIX 1
- NFU1 1
- NGLY1 1
- NHEJ1 1
- NHLRC1 1
- NHS 1
- NIPA1 1
- NIPBL 1
- NKX2-1 1
- NKX2-5 1
- NOP56 1
- NPC1 1
- NPC2 1
- NPHP1 1
- NR2F1 1
- NRAS 1
- NSD1 1
- NSDHL 1
- NT5C2 1
- NTRK1 1
- NUBPL 1
- OBSL1 1
- OCRL 1
- OFD1 1
- OPA3 1
- OPHN1 1
- ORC1 1
- ORC4 1
- ORC6 1
- OTC 1
- OTX2 1
- OXCT1 1
- P3H1 2
- PACS1 1
- PAFAH1B1 1
- PAH 1
- PAK3 1
- PALB2 1
- PANK2 1
- PAPSS2 1
- PARK7 1
- PAX2 1
- PAX6 1
- PAX8 1
- PC 1
- PCBD1 1
- PCCA 1
- PCCB 1
- PCDH19 1
- PCNT 1
- PDCD10 1
- PDE4D 1
- PDGFB 1
- PDGFRB 1
- PDHA1 1
- PDHX 1
- PDSS2 1
- PDYN 1
- PEPD 1
- PEX1 1
- PEX10 1
- PEX12 1
- PEX13 1
- PEX14 1
- PEX16 1
- PEX19 1
- PEX2 1
- PEX26 1
- PEX3 1
- PEX5 1
- PEX6 1
- PEX7 1
- PGAP1 1
- PGAP2 1
- PGAP3 1
- PGK1 1
- PGM1 1
- PHF6 1
- PHF8 1
- PHGDH 1
- PHOX2B 1
- PIEZO2 1
- PIGA 1
- PIGL 1
- PIGN 1
- PIGO 1
- PIGV 1
- PIK3CA 1
- PIK3R1 1
- PIK3R2 1
- PINK1 1
- PITX3 1
- PLA2G6 1
- PLCB1 1
- PLEC 1
- PLK4 1
- PLOD1 1
- PLP1 1
- PMM2 1
- PMP22 1
- PNKD 1
- PNKP 1
- PNPLA6 1
- PNPO 1
- PNPT1 1
- POC1A 1
- POGZ 1
- POLG 1
- POLR3A 1
- POLR3B 1
- POMGNT1 1
- POMGNT2 1
- POMT1 1
- POMT2 1
- PORCN 1
- POU1F1 1
- PPP2R1A 1
- PPP2R2B 1
- PPP2R5D 1
- PPT1 1
- PQBP1 1
- PRICKLE1 1
- PRICKLE2 1
- PRKAR1A 1
- PRKCG 1
- PRKN 2
- PRKRA 1
- PROP1 1
- PRPS1 1
- PRRT2 1
- PRSS12 1
- PRX 1
- PSAP 1
- PSEN1 1
- PSMB8 1
- PSPH 1
- PTCH1 1
- PTCHD1 1
- PTDSS1 1
- PTEN 1
- PTF1A 1
- PTH1R 1
- PTPN11 1
- PTS 1
- PURA 1
- PYCR1 1
- QARS 2
- QDPR 1
- RAB18 1
- RAB23 1
- RAB39B 1
- RAB3GAP1 1
- RAB3GAP2 1
- RAD21 1
- RAF1 1
- RAI1 1
- RAPSN 1
- RARB 1
- RARS2 1
- RAX 1
- RBM8A 1
- RECQL4 1
- REEP1 1
- REEP2 1
- RELN 1
- RET 1
- RETREG1 2
- RFX6 1
- RNASEH2A 1
- RNASEH2B 1
- RNASEH2C 1
- RNASET2 1
- RNF216 1
- RNU4ATAC 1
- ROGDI 1
- ROR2 1
- RPGRIP1L 1
- RPS6KA3 1
- RTEL1 1
- RTN2 1
- RTTN 1
- RYR1 1
- SACS 1
- SALL1 1
- SAMHD1 1
- SATB2 1
- SBDS 1
- SBF2 1
- SC5D 1
- SCARB2 1
- SCN11A 1
- SCN1A 1
- SCN1B 1
- SCN2A 1
- SCN4A 1
- SCN8A 1
- SCN9A 1
- SCO1 1
- SCO2 1
- SDHA 1
- SDHAF1 1
- SETBP1 1
- SETD5 1
- SETX 1
- SF3B4 1
- SGCE 1
- SGSH 1
- SH3TC2 1
- SHANK3 1
- SHH 1
- SHOC2 1
- SIGMAR1 1
- SIK1 1
- SIL1 1
- SIX3 1
- SKI 1
- SLC12A6 1
- SLC13A5 1
- SLC16A2 1
- SLC17A5 1
- SLC19A3 1
- SLC20A2 1
- SLC22A5 1
- SLC25A15 1
- SLC25A20 1
- SLC25A22 1
- SLC2A1 1
- SLC2A10 1
- SLC2A2 1
- SLC33A1 1
- SLC35A2 1
- SLC35C1 1
- SLC46A1 1
- SLC4A1 1
- SLC4A4 1
- SLC52A3 1
- SLC5A5 1
- SLC6A1 1
- SLC6A17 1
- SLC6A19 1
- SLC6A3 1
- SLC6A5 1
- SLC6A8 1
- SLC9A6 1
- SLX4 1
- SMARCA2 1
- SMARCA4 1
- SMARCAL1 1
- SMARCB1 1
- SMC1A 1
- SMOC1 1
- SMPD1 1
- SNCA 1
- SNRPB 1
- SNX14 1
- SOS1 1
- SOX10 1
- SOX2 1
- SOX3 1
- SPART 2
- SPAST 1
- SPEG 1
- SPG11 1
- SPG21 1
- SPG7 1
- SPR 1
- SPRED1 1
- SPTAN1 1
- SPTBN2 1
- SPTLC2 1
- SRCAP 1
- SRD5A3 1
- ST3GAL3 1
- ST3GAL5 1
- STAMBP 1
- STIL 1
- STRA6 1
- STRADA 1
- STS 1
- STUB1 1
- STX1B 1
- STXBP1 1
- SUCLG1 1
- SUMF1 1
- SURF1 1
- SYNE1 1
- SYNGAP1 1
- SYNJ1 1
- SYP 1
- TAF1 1
- TARDBP 1
- TAT 1
- TAZ 1
- TBC1D24 1
- TBCE 1
- TBP 1
- TBX1 1
- TBX3 1
- TCF4 1
- TCOF1 1
- TECPR2 1
- TFAP2A 1
- TFAP2B 1
- TFG 1
- TGFBR1 1
- TGIF1 1
- TGM6 1
- TH 1
- THAP1 1
- THRA 1
- TIMM8A 1
- TK2 1
- TMCO1 1
- TMEM165 1
- TMEM237 1
- TMEM240 1
- TMEM5 2
- TMEM67 1
- TMEM70 1
- TOR1A 1
- TP63 1
- TPP1 1
- TRAPPC9 1
- TREX1 1
- TRIM32 1
- TRIM37 1
- TRMT10A 1
- TSC1 1
- TSC2 1
- TSEN54 1
- TSHB 1
- TSHR 1
- TSPAN7 1
- TTBK2 1
- TTC19 1
- TTC8 1
- TTPA 1
- TUBA1A 1
- TUBA8 1
- TUBB 1
- TUBB2A 1
- TUBB2B 1
- TUBB4A 1
- TUBGCP6 1
- TUSC3 1
- TWIST1 1
- TYR 1
- UBE2A 1
- UBE3A 1
- UBE3B 1
- UBR1 1
- UMPS 1
- UPF3B 1
- UROC1 1
- VAMP1 1
- VDR 1
- VIPAS39 1
- VLDLR 1
- VPS13B 1
- VPS35 1
- WASHC5 1
- WDPCP 1
- WDR45 1
- WDR60 2
- WDR62 1
- WNT5A 1
- WWOX 1
- XPA 1
- XRCC4 1
- ZBTB20 1
- ZC4H2 1
- ZDHHC9 1
- ZEB2 1
- ZFP57 1
- ZFYVE26 1
- ZIC2 1
- ZMPSTE24 1
- ZNF711 1
STRs in panel
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This Panel is marked as Internal
BRIDGE_SPEED_NEURO_v2.0_20160416
Gene: KDM6A Red List (low evidence)
KDM6A (lysine demethylase 6A)
EnsemblGeneIds (GRCh38): ENSG00000147050
EnsemblGeneIds (GRCh37): ENSG00000147050
OMIM: 300128, Gene2Phenotype
KDM6A is in 16 panels
EnsemblGeneIds (GRCh38): ENSG00000147050
EnsemblGeneIds (GRCh37): ENSG00000147050
OMIM: 300128, Gene2Phenotype
KDM6A is in 16 panels
1 review
BRIDGE consortium (NIHRBR-RD)
Green List (high evidence)
ddg2p_20141118; ddg2p_20141118_conf; ddg2p_201507; ddg2p_201507_conf; gilissen_2014_known; UKGTN_v12; Nijmegen_ID_diagnostic; Nijmegen_ID_candidates; gonzalez_mantilla_2016; GEL_ID_green_20160217; neuro_20160418_strict; Loss of functionCreated: 7 Feb 2017, 4:32 p.m.
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
Kabuki syndrome 2, 300867
Variants in this GENE are reported as part of current diagnostic practice
Created: 7 Feb 2017, 4:32 p.m.
Panel version: 0.2
Panel version: 0.2
Details
- Mode of Inheritance
- X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
- Sources
-
- BRIDGE
- Phenotypes
-
- Kabuki syndrome 2, 300867
- OMIM
- 300128
- Clinvar variants
- Variants in KDM6A
- Penetrance
- Complete
- Panels with this gene
-
- Kabuki syndrome
- Clefting
- CAKUT
- Intellectual disability
- Deafness and congenital structural abnormalities
- Cytopenias and congenital anaemias
- COVID-19 research
- Rare syndromic craniosynostosis or isolated multisuture synostosis
- Fetal anomalies
- Structural eye disease
- Congenital hyperinsulinism
- Primary immunodeficiency or monogenic inflammatory bowel disease
- Monogenic short stature
- Osteogenesis imperfecta
- IUGR and IGF abnormalities
- DDG2P
History Filter Activity
7 Feb 2017, Gel status: 0
Created
Ellen McDonagh (Genomics England Curator)KDM6A was created by ellenmcdonagh
7 Feb 2017, Gel status: 0
Added New Source
Ellen McDonagh (Genomics England Curator)KDM6A was added to BRIDGE_SPEED_NEURO_v2.0_20160416panel. Sources: BRIDGE