Proteinuric renal disease
Gene: VIPAS39EnsemblGeneIds (GRCh38): ENSG00000151445
EnsemblGeneIds (GRCh37): ENSG00000151445
OMIM: 613401, Gene2Phenotype
VIPAS39 is in 17 panels
2 reviews
Arina Puzriakova (Genomics England Curator)
Comment on list classification: There is sufficient evidence to promote this gene to Green at the next GMS panel update.Created: 27 Mar 2025, 1:36 p.m. | Last Modified: 27 Mar 2025, 1:36 p.m.
Panel Version: 4.25
VIPAS39 biallelic variants cause Arthrogryposis, renal dysfunction, and cholestasis 2 (OMIM:613404). At least 11 individuals have been reported in the literature. Proteinuria has been reported in at least 9 individuals (PMID:39736737;35151346;37202112;26019847;24071963;31479177) which supports inclusion of this gene on the panel.Created: 27 Mar 2025, 1:33 p.m. | Last Modified: 27 Mar 2025, 1:38 p.m.
Panel Version: 4.27
Phenotypes
Arthrogryposis, renal dysfunction, and cholestasis 2 (OMIM:613404)
Publications
Eleanor Williams (Genomics England Curator)
This gene was part of an initial gene list collated by Elizabeth Watson, North Bristol NHS Trust, February 2019 on behalf of the GMS Renal Specialist Test Group. Gene Symbol submitted: VIPAS39 ; Suggested initial gene rating: amber; Evidence for inclusion: PMID: 20190753; Other comments: Renal dysfunction part of syndromic presentation.Created: 4 Feb 2019, 10:41 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Arthrogryposis, renal dysfunction, and cholestasis 2 # 613404
Publications
- PMID: 20190753
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- NHS GMS
- Phenotypes
-
- Arthrogryposis, renal dysfunction, and cholestasis 2, OMIM:613404
- Tags
- OMIM
- 613401
- Clinvar variants
- Variants in VIPAS39
- Penetrance
- None
- Publications
- Panels with this gene
-
- Arthrogryposis
- Inherited bleeding disorders
- Neonatal cholestasis
- Fetal anomalies
- Proteinuric renal disease
- Undiagnosed metabolic disorders
- Intellectual disability
- Childhood onset dystonia, chorea or related movement disorder
- CAKUT
- Nephrocalcinosis or nephrolithiasis
- Cholestasis
- Unexplained kidney failure in young people
- Bleeding and platelet disorders
- DDG2P
- Renal tubulopathies
- Likely inborn error of metabolism
- Ichthyosis and erythrokeratoderma
History Filter Activity
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: VIPAS39 were set to 39736737; 35151346; 37202112; 26019847; 24071963
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: VIPAS39 were set to 20190753
Entity classified by Genomics England curator
Arina Puzriakova (Genomics England Curator)Gene: vipas39 has been classified as Amber List (Moderate Evidence).
Added Tag
Arina Puzriakova (Genomics England Curator)Tag Q1_25_ promote_green tag was added to gene: VIPAS39.
Set mode of inheritance
Arina Puzriakova (Genomics England Curator)Mode of inheritance for gene: VIPAS39 was changed from to BIALLELIC, autosomal or pseudoautosomal
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: VIPAS39 were changed from Arthrogryposis, renal dysfunction, and cholestasis 2 # 613404 to Arthrogryposis, renal dysfunction, and cholestasis 2, OMIM:613404
Set Phenotypes
Eleanor Williams (Genomics England Curator)Phenotypes for gene: VIPAS39 were changed from to Arthrogryposis, renal dysfunction, and cholestasis 2 # 613404
Set publications
Eleanor Williams (Genomics England Curator)Publications for gene: VIPAS39 were set to
Created, Added New Source, Set mode of inheritance
Eleanor Williams (Genomics England Curator)gene: VIPAS39 was added gene: VIPAS39 was added to Proteinuric renal disease. Sources: NHS GMS Mode of inheritance for gene: VIPAS39 was set to