Inherited non-medullary thyroid cancer
Gene: SLC5A5EnsemblGeneIds (GRCh38): ENSG00000105641
EnsemblGeneIds (GRCh37): ENSG00000105641
OMIM: 601843, Gene2Phenotype
SLC5A5 is in 5 panels
3 reviews
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Associated with Thyroid dyshormonogenesis 1 274400 in OMIM and as a confirmed G2P. At least one variant (biallelic) reported in a the tumours of a patient with Thyroid dyshormonogenesis and reduced levels of SLC5A5 mRNA expression (PMID 9171822). Other studies report reduced SLC5A5 expression in thyroid tumours but do not assess for the presence of variants (9661633; 10487692). Restoration of expression reported in carcinoma cell line after demethylation of DNA in the untranslated region within the first exon of SLC5A5 (PMID 10404820)(no report that the cell lines harboured variants).Created: 10 Jul 2017, 12:42 p.m.
Emma Woodward (Manchester Centre for Genomic Medicine)
I am not aware of evidence linking germline alterations of SLC5A5 to FNMTCCreated: 13 Jun 2017, 1:50 p.m.
Fiona Lalloo (Manchester Centre for Genomic Medicine)
No evidence of association with malignancy. Some evidence for association with benign thyroid disease, but not strongCreated: 9 Jun 2017, 8:30 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
congenital hypothyroidism
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Radboud University Medical Center, Nijmegen
- Literature
- Illumina TruGenome Clinical Sequencing Services
- Phenotypes
-
- Follicular thyroid adenoma
- Thyroid dyshormonogenesis 1 274400
- OMIM
- 601843
- Clinvar variants
- Variants in SLC5A5
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
panel promoted to version 1
Sarah Leigh (Genomics England Curator)All genes have been reviewed and the reviews evaluated. 07.08.2017
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Set publications
Sarah Leigh (Genomics England Curator)Publications for SLC5A5 were set to 9171822; 9661633; 10487692; 9709973; 26960757
Set publications
Sarah Leigh (Genomics England Curator)Publications for SLC5A5 were set to 9171822; 9661633; 10487692; 9709973
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for SLC5A5 were set to Follicular thyroid adenoma; Thyroid dyshormonogenesis 1 274400
Added New Source
Sarah Leigh (Genomics England Curator)SLC5A5 was added to Inherited non-medullary thyroid cancerpanel. Source: Radboud University Medical Center, Nijmegen
Added New Source
Sarah Leigh (Genomics England Curator)SLC5A5 was added to Inherited non-medullary thyroid cancerpanel. Source: Literature
Created
Sarah Leigh (Genomics England Curator)SLC5A5 was created by sleigh
Added New Source
Sarah Leigh (Genomics England Curator)SLC5A5 was added to Inherited non-medullary thyroid cancerpanel. Sources: Illumina TruGenome Clinical Sequencing Services