Skeletal dysplasia
Gene: AFF3EnsemblGeneIds (GRCh38): ENSG00000144218
EnsemblGeneIds (GRCh37): ENSG00000144218
OMIM: 601464, Gene2Phenotype
AFF3 is in 5 panels
4 reviews
Eleanor Williams (Genomics England Curator)
The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.Created: 30 Jan 2023, 2:18 p.m. | Last Modified: 30 Jan 2023, 2:35 p.m.
Panel Version: 3.5
Arina Puzriakova (Genomics England Curator)
Comment on list classification: Upgrading from Red to Amber but there is sufficient evidence to promote this gene to Green at the next GMS panel update.Created: 11 Apr 2022, 2:15 p.m. | Last Modified: 11 Apr 2022, 2:15 p.m.
Panel Version: 2.194
At least 18 individuals have been reported with either a de novo missense variant or a 500 kb microdeletion within the AFF3 locus. Of these, 12 patients presented with mesomelic dysplasia resembling Nievergelt/Savarirayan mesomelic skeletal dysplasia. Other features commonly observed include severe developmental epileptic encephalopathy, failure to thrive, microcephaly, brain atrophy, abnormalities of the urinary system, gastrointestinal symptoms, and hypertrichosis.Created: 11 Apr 2022, 2:14 p.m. | Last Modified: 11 Apr 2022, 2:14 p.m.
Panel Version: 2.193
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
KINSSHIP syndrome, OMIM:619297
Publications
Sarah Leigh (Genomics England Curator)
Comment on list classification: Tier 1 gene for skeletal dysplasia (Ana Beleza). No published evidence for association with Skeletal dysplasiaCreated: 8 Jul 2016, 1:43 p.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 1Created: 15 Jun 2016, 2:01 p.m.
Mode of inheritance
Unknown
Phenotypes
Mesomelic dysplasia with absent fibulae and triangular tibiae (Nievergelt type) 163400
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- NHS GMS
- Expert Review Green
- Phenotypes
-
- KINSSHIP syndrome, OMIM:619297
- OMIM
- 601464
- Clinvar variants
- Variants in AFF3
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Removed Tag
Eleanor Williams (Genomics England Curator)Tag Q2_22_rating was removed from gene: AFF3.
Added New Source, Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source Expert Review Green was added to AFF3. Source NHS GMS was added to AFF3. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Arina Puzriakova (Genomics England Curator)Gene: aff3 has been classified as Amber List (Moderate Evidence).
Added Tag
Arina Puzriakova (Genomics England Curator)Tag Q2_22_rating tag was added to gene: AFF3.
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: AFF3 were set to
Set mode of inheritance
Arina Puzriakova (Genomics England Curator)Mode of inheritance for gene: AFF3 was changed from Unknown to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: AFF3 were changed from No OMIM or G2P phenotype to KINSSHIP syndrome, OMIM:619297
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Created
Sarah Leigh (Genomics England Curator)AFF3 was created by sleigh
Added New Source
Sarah Leigh (Genomics England Curator)AFF3 was added to Unexplained skeletal dysplasiapanel. Sources: