Skeletal dysplasia
Gene: HNRNPKEnsemblGeneIds (GRCh38): ENSG00000165119
EnsemblGeneIds (GRCh37): ENSG00000165119
OMIM: 600712, Gene2Phenotype
HNRNPK is in 9 panels
3 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
Neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome due to a point mutation. Two cases - skeletal anomalies, including hip dysplasia, scoliosis, and extra lumbar vertebrae; Two cases reported: 1 had multiple vertebral segmentation defects. One patient had planovalgus feet and crowded toes, whereas the other had postaxial polydactyly and overlapping toes. ?SD, only 2 cases ; Review on behalf of Tracy LesterCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Au-Kline syndrome:616580; Orphanet:453499
Publications
Eleanor Williams (Genomics England Curator)
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: HNRNPK; Initial rating suggestion: AmberCreated: 6 Mar 2019, 11:36 a.m.
Ellen McDonagh (Genomics England Curator)
Comment on list classification: Source: ClinGen Gene Validity Classification Summary. Determined as MODERATE by calculated classification and MODERATE by Expert curation (dated 11/15/2016). Available here: https://search.clinicalgenome.org/kb/gene-validity/5456. Comments provided by the expert curation: Evidence is rapidly emerging supporting the association between HNRNPK and Au-Kline syndrome. Gallardo et al. published a paper in 2015 describing an Hnrnpk +/- haploinsufficient mouse, which they developed to study its role in tumorigenesis. Personal communication with the senior author of that paper, Sean Post, in August 2016, revealed that the haploinsufficient mice appeared to have "significant reduction in overall size and had numerous structural/bone abnormalities," remniscient of the human phenotype, though he clarified that his group is not able to formally assess them for these types of phenotypes. Additionally, we are aware of at least one additional unpublished case - this evidence is not being formally considered, as it is not part of the public domain.Created: 4 Jul 2017, 2:41 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome due to a point mutation; OMIM:616580; Orphanet:453499
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- NHS GMS
- Expert Review Amber
- Other
- Phenotypes
-
- Orphanet:453499
- OMIM:616580
- Au-Kline syndrome:616580
- Neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome due to a point mutation
- Orphanet:453499
- OMIM
- 600712
- Clinvar variants
- Variants in HNRNPK
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes, Set publications
Eleanor Williams (Genomics England Curator)Added phenotypes Au-Kline syndrome:616580; Orphanet:453499 for gene: HNRNPK Publications for gene HNRNPK were changed from 26173930; 26954065; 26638989 to 26173930; 26638989; 26954065
Added New Source
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to HNRNPK.
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Added New Source
Ellen McDonagh (Genomics England Curator)HNRNPK was added to Unexplained skeletal dysplasiapanel. Sources: Other
Created
Ellen McDonagh (Genomics England Curator)HNRNPK was created by ellenmcdonagh