Skeletal dysplasia
Gene: SP7EnsemblGeneIds (GRCh38): ENSG00000170374
EnsemblGeneIds (GRCh37): ENSG00000170374
OMIM: 606633, Gene2Phenotype
SP7 is in 4 panels
4 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
OI and decreasing bone density gp of SD, only 2 cases?; Review on behalf of Tracy LesterCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Osteogenesis imperfecta, type XII 613849
Publications
Eleanor Williams (Genomics England Curator)
Comment on list classification: Changing rating from red to green. Including genes that are green on the Osteogenesis imperfecta panel (panel ID:196, version 2.0) as green on the Skeletal dysplasia panel on the advice of Prof Lyn Chitty.Created: 11 Dec 2019, 2:11 p.m. | Last Modified: 11 Dec 2019, 2:11 p.m.
Panel Version: 1.262
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: SP7; Initial rating suggestion: amberCreated: 6 Mar 2019, 11:37 a.m.
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Associated with phenotype in OMIM. Only one variant reportedCreated: 27 Jul 2016, 10:08 a.m.
Listed as associated with Skeletal Dysplasia by Gene Advisor (June 2016), Steve AbbsCreated: 27 Jul 2016, 10:07 a.m.
Comment on list classification: Only one variant reported for this phenotypeCreated: 11 Jul 2016, 9:54 a.m.
Comment on list classification: Tier 1 gene for skeletal dysplasia (Ana Beleza). Only one variant reportedCreated: 8 Jul 2016, 1:08 p.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 1Created: 17 Jun 2016, 8:08 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Osteogenesis imperfecta, type XII 613849
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- Emory Genetics Laboratory
- Radboud University Medical Center, Nijmegen
- Illumina TruGenome Clinical Sequencing Services
- Expert
- Phenotypes
-
- Osteogenesis imperfecta, type XII 613849
- OMIM
- 606633
- Clinvar variants
- Variants in SP7
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: sp7 has been classified as Green List (High Evidence).
Set Phenotypes, Set publications
Eleanor Williams (Genomics England Curator)Added phenotypes Osteogenesis imperfecta, type XII 613849 for gene: SP7 Publications for gene SP7 were changed from 20579626 to 2057926; 29382611
Added New Source
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to SP7.
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for SP7 were set to Osteogenesis imperfecta, type XII 613849
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set publications
Sarah Leigh (Genomics England Curator)Publications for SP7 were set to 20579626
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Mode of Inheritance, Added New Source
Sarah Leigh (Genomics England Curator)SP7 was added to Unexplained skeletal dysplasiapanel. Source: Expert SP7 was added to Unexplained skeletal dysplasiapanel. Source: Radboud University Medical Center, Nijmegen SP7 was added to Unexplained skeletal dysplasiapanel. Source: Illumina TruGenome Clinical Sequencing Services SP7 was added to Unexplained skeletal dysplasiapanel. Source: Emory Genetics Laboratory SP7 was added to Unexplained skeletal dysplasiapanel. Source: Expert Review Green Model of inheritance for gene SP7 was set to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Sarah Leigh (Genomics England Curator)SP7 was added to Unexplained skeletal dysplasiapanel. Sources:
Created
Sarah Leigh (Genomics England Curator)SP7 was created by sleigh