Genes in panel

Early onset or syndromic epilepsy

Gene: GSPT2

Amber List (moderate evidence)

GSPT2 (G1 to S phase transition 2)
EnsemblGeneIds (GRCh38): ENSG00000189369
EnsemblGeneIds (GRCh37): ENSG00000189369
OMIM: 300418, Gene2Phenotype
GSPT2 is in 4 panels

1 review

Ida Ertmanska (Genomics England Curator)

Green List (high evidence)

Comment on list classification: There are now at least 5 unrelated male individuals reported with hemizygous missense variants in GSPT2 and a neurodevelopmental disorder. Three individuals presented with childhood-onset epilepsy. The variants were inherited from unaffected mothers. Hence, this gene can be promoted to Green on this panel, with MOI set to "X-LINKED: hemizygous mutation in males, biallelic mutations in females".
Created: 27 Oct 2026, 12:57 p.m. | Last Modified: 27 Oct 2026, 12:57 p.m.
Panel Version: 9.91
PMID: 41420488 Wei et al., 2026
Study reports 6 male individuals from 6 unrelated Chinese families (including 1 fetal case) carrying hemizygous missense variants in GSPT2 with intellectual disability, delayed speech and language development, autism spectrum disorder, epilepsy, or abnormal fetal neurodevelopment. Severe ID / learning disability & DD were present in 5/5 individuals. Variable brain malformations and seizures were reported in 3 probands. Seizure age of onset was 9 months to 7 years.
Functional evidence: Structural molecular modeling revealed significant deleterious effects of the identified variants. GSPT2 is preferentially enriched in the brain and cerebellum compared with other tissues. Transcriptomics revealed that GABAergic and calcium-signaling-related genes were significantly downregulated in GSPT2-deficient cells.

GSPT2 is not yet associated with a disease entity in OMIM (accessed 27th Oct 2026).
Sources: Literature
Created: 27 Oct 2026, 12:55 p.m.

Mode of inheritance
X-LINKED: hemizygous mutation in males, biallelic mutations in females

Phenotypes
neurodevelopmental disorder, MONDO:0700092

Publications

Details

Mode of Inheritance
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • neurodevelopmental disorder, MONDO:0700092
Tags
Q4_26_promote_green
OMIM
300418
Clinvar variants
Variants in GSPT2
Penetrance
None
Publications
Panels with this gene

History Filter Activity

27 Oct 2026, Gel status: 2

Entity classified by Genomics England curator

Ida Ertmanska (Genomics England Curator)

Gene: gspt2 has been classified as Amber List (Moderate Evidence).

27 Oct 2026, Gel status: 1

Created, Added New Source, Added Tag, Set mode of inheritance, Set publications, Set Phenotypes

Ida Ertmanska (Genomics England Curator)

gene: GSPT2 was added gene: GSPT2 was added to Early onset or syndromic epilepsy. Sources: Literature Q4_26_promote_green tags were added to gene: GSPT2. Mode of inheritance for gene: GSPT2 was set to X-LINKED: hemizygous mutation in males, biallelic mutations in females Publications for gene: GSPT2 were set to 41420488 Phenotypes for gene: GSPT2 were set to neurodevelopmental disorder, MONDO:0700092 Review for gene: GSPT2 was set to GREEN