Genes in panel

Likely inborn error of metabolism

Gene: CYCS

Amber List (moderate evidence)

CYCS (cytochrome c, somatic)
EnsemblGeneIds (GRCh38): ENSG00000172115
EnsemblGeneIds (GRCh37): ENSG00000172115
OMIM: 123970, Gene2Phenotype
CYCS is in 8 panels

5 reviews

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

Comment on list classification: There are sufficient unrelated cases available to support a gene-disease association for CYCS. CYCS is located in the mitochondria and is involved in the electron transport system that functions in oxidative phosphorylation. In vitro studies of patient variants have shown functional defects in the mitochondrial respiratory chain.

This gene has already been promoted to green rating on Mitochondrial disorders panel (https://panelapp.genomicsengland.co.uk/panels/112/gene/CYCS/) and can therefore be promoted to green rating in this panel in the next GMS update.
Created: 7 Jun 2025, 8:12 p.m. | Last Modified: 7 Jun 2025, 9:02 p.m.
Panel Version: 8.21

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Sarah Leigh (Genomics England Curator)

I don't know

The phenotype of Thrombocytopenia 4 612004 is not relevant to Inborn errors of metabolism nor Mitochondrial panels (Helen Britain, GEL Clinical Fellow).
Created: 12 Dec 2019, 12:27 p.m. | Last Modified: 12 Dec 2019, 12:27 p.m.
Panel Version: 1.425

Zornitza Stark (Australian Genomics)

Green List (high evidence)

Please note recent report of a third unrelated patient.
Created: 29 Aug 2018, 5:41 a.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
Thrombocytopenia 4, MIM#612004

Publications

Variants in this GENE are reported as part of current diagnostic practice

Ellen McDonagh (Genomics England Curator)

Comment on mode of inheritance: Sourced from OMIM, and not on the imprinted gene list.
Created: 26 Feb 2016, 5:27 p.m.
Comment on list classification: Mutations reported in 2 families, in seperate publications, with functional data.
Created: 26 Feb 2016, 5:24 p.m.

Shamima Rahman (UCL Institute of Child Health)

Green List (high evidence)

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
Phenotypes
  • Thrombocytopenia 4, OMIM:612004
Tags
Q2_25_ promote_green
OMIM
123970
Clinvar variants
Variants in CYCS
Penetrance
None
Publications
Panels with this gene

History Filter Activity

7 Jun 2025, Gel status: 2

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_25_ promote_green tag was added to gene: CYCS.

7 Jun 2025, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: cycs has been classified as Amber List (Moderate Evidence).

6 Jun 2025, Gel status: 2

Set publications

Achchuthan Shanmugasundram (Genomics England Curator)

Publications for gene: CYCS were set to 24326104; PMID: 18345000

12 Mar 2024, Gel status: 2

Set Phenotypes

Arina Puzriakova (Genomics England Curator)

Phenotypes for gene: CYCS were changed from Thrombocytopenia 4, 612004 to Thrombocytopenia 4, OMIM:612004

8 Jan 2019, Gel status: 2

Panel promoted to version 1.0

Ellen McDonagh (Genomics England Curator)

Sarah Leigh: Associated with relevant pheno

16 Dec 2018, Gel status: 2

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Ellen McDonagh (Genomics England Curator)

gene: CYCS was added gene: CYCS was added to Inborn errors of metabolism. Sources: Expert Review Amber Mode of inheritance for gene: CYCS was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: CYCS were set to 24326104; PMID: 18345000 Phenotypes for gene: CYCS were set to Thrombocytopenia 4, 612004