- AARS2 3
- AASS 3
- ABAT 5
- ABCA1 1
- ABCB11 1
- ABCB4 1
- ABCB7 5
- ABCD1 2
- ABCD4 1
- ABCG5 1
- ABCG8 1
- ABHD12 1
- ABHD5 1
- ACACA 2
- ACAD8 1
- ACAD9 4
- ACADM 3
- ACADS 1
- ACADSB 1
- ACADVL 3
- ACAT1 1
- ACO2 5
- ACOX1 0
- ACOX2 2
- ACSF3 3
- ACY1 1
- ADA 3
- ADAR 1
- ADSL 1
- AFG3L2 4
- AGA 1
- AGK 3
- AGL 1
- AGPS 0
- AGXT 0
- AHCY 2
- AIFM1 2
- AKR1D1 1
- ALAD 1
- ALAS2 1
- ALDH18A1 2
- ALDH3A2 1
- ALDH4A1 1
- ALDH5A1 1
- ALDH6A1 1
- ALDH7A1 2
- ALDOA 1
- ALDOB 0
- ALG1 0
- ALG11 0
- ALG12 0
- ALG14 1
- ALG3 0
- ALG6 0
- ALG8 0
- ALG9 0
- ALPL 1
- AMACR 0
- AMN 1
- AMT 1
- ANO10 3
- APOA1 1
- APOA5 2
- APOB 2
- APOC2 1
- APOE 1
- APOPT1 3
- APRT 1
- APTX 3
- ARG1 0
- ARSA 1
- ARSB 0
- ARSE 1
- ARSG 3
- ARSK 2
- ASAH1 1
- ASL 0
- ASPA 2
- ASS1 0
- ATAD3A 5
- ATIC 2
- ATP13A2 1
- ATP5A1 6
- ATP5D 1
- ATP5E 4
- ATP5G3 5
- ATP5O 4
- ATP6AP1 0
- ATP6V0A2 0
- ATP7A 3
- ATP7B 1
- ATP8B1 1
- ATPAF2 2
- AUH 0
- B3GALNT2 0
- B3GALT6 0
- B3GAT3 0
- B3GLCT 1
- B4GALNT1 2
- B4GALT1 0
- B4GALT7 0
- BAAT 1
- BCAT2 3
- BCKDHA 0
- BCKDHB 0
- BCKDK 1
- BCS1L 2
- BOLA3 3
- BTD 2
- C12orf65 3
- C19orf12 7
- C19orf70 2
- C1QBP 2
- C2orf69 4
- CA5A 2
- CARS2 4
- CAT 0
- CBS 2
- CCDC115 1
- CHCHD10 3
- CHKB 6
- CHST14 0
- CHST3 0
- CHST6 0
- CHSY1 0
- CISD2 1
- CLDN16 1
- CLDN19 1
- CLN3 1
- CLN5 1
- CLN6 1
- CLN8 1
- CLPB 5
- CLPP 2
- CMPK2 3
- CNNM2 1
- COA6 3
- COA7 1
- COG1 0
- COG4 0
- COG5 0
- COG6 0
- COG7 0
- COG8 0
- COQ2 3
- COQ4 2
- COQ6 2
- COQ7 3
- COQ8A 4
- COQ8B 3
- COQ9 2
- COX10 2
- COX11 4
- COX14 3
- COX15 2
- COX18 5
- COX20 3
- COX4I1 3
- COX5A 3
- COX6A1 2
- COX6A2 4
- COX6B1 1
- COX7B 2
- CP 1
- CPOX 4
- CPS1 0
- CPT1A 1
- CPT2 4
- CREB3L3 4
- CRLS1 2
- CSGALNACT1 3
- CTH 1
- CTNS 1
- CTSA 1
- CTSC 1
- CTSD 1
- CTSF 1
- CTSK 1
- CUBN 1
- CYC1 2
- CYCS 5
- CYP27A1 1
- CYP7B1 1
- D2HGDH 1
- DARS 7
- DARS2 3
- DBH 2
- DBT 0
- DCXR 2
- DDC 2
- DDOST 2
- DGUOK 2
- DHCR24 1
- DHCR7 2
- DHFR 0
- DHODH 1
- DHRSX 7
- DHTKD1 7
- DLAT 3
- DLD 3
- DNA2 3
- DNAJC12 1
- DNAJC19 3
- DNAJC5 1
- DNM1L 3
- DNM2 3
- DOLK 0
- DPAGT1 0
- DPM1 0
- DPM2 2
- DPM3 2
- DPYD 2
- DPYS 1
- DYM 2
- EARS2 2
- EBP 1
- ECHS1 3
- EDEM3 1
- EHBP1L1 2
- ELAC2 2
- ENO3 2
- EOGT 2
- EPG5 1
- EPM2A 1
- ETFA 2
- ETFB 2
- ETFDH 3
- ETHE1 2
- EXT1 1
- EXT2 0
- FA2H 1
- FAH 1
- FARS2 3
- FASTKD2 2
- FBP1 0
- FBXL4 4
- FDX2 6
- FDXR 2
- FECH 3
- FGFR2 1
- FH 2
- FKRP 0
- FKTN 0
- FLAD1 3
- FMO3 1
- FOLR1 0
- FOXRED1 1
- FTCD 2
- FUCA1 1
- FUK 3
- FUT8 1
- FXN 7
- G6PC 2
- G6PC3 1
- GAA 2
- GABRG2 1
- GALC 1
- GALE 1
- GALK1 1
- GALM 2
- GALNS 0
- GALNT2 3
- GALNT3 0
- GALT 1
- GAMT 2
- GARS 3
- GATM 3
- GBA 1
- GBE1 1
- GCDH 1
- GCH1 1
- GCLC 1
- GCSH 4
- GDAP1 4
- GFER 2
- GFM1 2
- GFM2 3
- GFPT1 0
- GIF 2
- GK 1
- GLA 0
- GLB1 0
- GLDC 1
- GLRA1 1
- GLRX5 3
- GLS 4
- GLUD1 5
- GLUL 1
- GLYCTK 1
- GM2A 1
- GMPPA 2
- GMPPB 0
- GNE 2
- GNMT 1
- GNPAT 0
- GNPTAB 0
- GNPTG 0
- GNS 0
- GORAB 2
- GPD1 1
- GPHN 1
- GPIHBP1 1
- GRHPR 0
- GRN 3
- GSS 1
- GSTZ1 2
- GTPBP3 3
- GUK1 3
- GUSB 0
- GYG1 2
- GYS1 2
- GYS2 0
- HAAO 1
- HADH 1
- HADHA 2
- HADHB 2
- HAMP 1
- HARS2 5
- HCCS 2
- HCFC1 1
- HEXA 1
- HEXB 1
- HFE 1
- HFE2 2
- HGD 1
- HGSNAT 0
- HIBCH 3
- HLCS 2
- HMBS 4
- HMGCL 4
- HMGCS2 1
- HOGA1 0
- HPD 1
- HPDL 3
- HPRT1 1
- HPS1 1
- HS2ST1 2
- HSD11B2 1
- HSD17B10 2
- HSD17B4 0
- HSD3B7 2
- HSPA9 5
- HSPD1 2
- HTRA2 1
- HYAL1 2
- IARS2 3
- IBA57 2
- IDH2 2
- IDH3A 3
- IDS 0
- IDUA 0
- IER3IP1 6
- ISCA1 1
- ISCA2 5
- ISCU 4
- ISPD 1
- ITPA 1
- IVD 0
- KARS 5
- KIAA0391 3
- KYNU 2
- L2HGDH 1
- LAMP2 2
- LARGE1 2
- LARS 3
- LARS2 2
- LBR 1
- LCAT 1
- LCT 1
- LDHA 1
- LDLR 1
- LDLRAP1 1
- LETM1 4
- LFNG 3
- LIAS 3
- LIG3 4
- LIPA 1
- LIPT1 3
- LIPT2 4
- LMBRD1 1
- LMF1 1
- LONP1 3
- LPIN1 2
- LPL 1
- LRPPRC 3
- LYRM4 4
- LYRM7 3
- MAGT1 1
- MAN1B1 0
- MAN2B1 1
- MAN2B2 3
- MANBA 1
- MAOA 1
- MARS2 2
- MAT1A 2
- MCCC1 1
- MCCC2 1
- MCEE 0
- MCOLN1 0
- MDH2 1
- MECR 2
- MFF 2
- MFN2 3
- MFSD8 1
- MGAT2 0
- MGME1 3
- MICU1 2
- MIPEP 1
- MLYCD 0
- MMAA 0
- MMAB 0
- MMACHC 1
- MMADHC 1
- MOCS1 1
- MOCS2 1
- MOGS 1
- MPC1 3
- MPDU1 0
- MPI 0
- MPV17 2
- MRM2 2
- MRPL3 5
- MRPL39 3
- MRPL44 3
- MRPL49 2
- MRPS2 2
- MRPS22 2
- MRPS34 2
- MSMO1 1
- MSTO1 3
- MT-ATP6 3
- MT-ATP8 3
- MT-CO1 3
- MT-CO2 3
- MT-CO3 3
- MT-CYB 3
- MTFMT 4
- MTHFR 0
- MT-ND1 3
- MT-ND2 3
- MT-ND3 3
- MT-ND4 3
- MT-ND4L 3
- MT-ND5 3
- MT-ND6 3
- MTO1 2
- MTPAP 5
- MTR 1
- MT-RNR1 3
- MTRR 1
- MT-TA 3
- MT-TC 3
- MT-TD 3
- MT-TE 3
- MT-TF 3
- MT-TG 3
- MT-TH 3
- MT-TI 3
- MT-TK 3
- MT-TL1 3
- MT-TL2 3
- MT-TM 3
- MT-TN 3
- MTTP 1
- MT-TP 3
- MT-TQ 3
- MT-TR 3
- MT-TS1 3
- MT-TS2 3
- MT-TT 5
- MT-TV 3
- MT-TW 3
- MT-TY 3
- MUT 1
- MVK 1
- NADK2 3
- NAGA 1
- NAGLU 0
- NAGS 0
- NARS2 2
- NAXD 3
- NAXE 2
- NDUFA1 2
- NDUFA10 1
- NDUFA11 1
- NDUFA12 4
- NDUFA13 6
- NDUFA2 1
- NDUFA4 4
- NDUFA6 3
- NDUFA8 5
- NDUFA9 5
- NDUFAF1 1
- NDUFAF2 2
- NDUFAF3 1
- NDUFAF4 1
- NDUFAF5 2
- NDUFAF6 3
- NDUFAF8 1
- NDUFB10 4
- NDUFB11 2
- NDUFB3 2
- NDUFB7 4
- NDUFB8 2
- NDUFC2 2
- NDUFS1 1
- NDUFS2 1
- NDUFS3 1
- NDUFS4 1
- NDUFS6 1
- NDUFS7 1
- NDUFS8 1
- NDUFV1 1
- NDUFV2 2
- NEU1 0
- NFS1 6
- NFU1 3
- NGLY1 2
- NHLRC1 1
- NNT 2
- NPC1 1
- NPC2 1
- NSDHL 1
- NSUN3 3
- NT5C3A 1
- NT5E 2
- NUBPL 2
- NUS1 4
- OAT 0
- OCRL 2
- OGDH 5
- OPA1 4
- OPA3 2
- OTC 1
- OXCT1 1
- PAH 1
- PANK2 2
- PARS2 4
- PC 3
- PCBD1 1
- PCCA 0
- PCCB 0
- PCK1 2
- PCSK9 1
- PDE12 3
- PDHA1 3
- PDHB 3
- PDHX 3
- PDK3 6
- PDP1 3
- PDSS1 2
- PDSS2 2
- PEPD 1
- PET100 4
- PEX1 0
- PEX10 0
- PEX11B 0
- PEX12 0
- PEX13 0
- PEX14 1
- PEX16 0
- PEX19 0
- PEX2 0
- PEX26 0
- PEX3 0
- PEX5 1
- PEX6 2
- PEX7 0
- PFKM 2
- PGAM2 2
- PGAP2 0
- PGAP3 0
- PGK1 2
- PGM1 1
- PGM3 0
- PHGDH 1
- PHKA1 2
- PHKA2 0
- PHKB 1
- PHKG2 0
- PHYH 0
- PIGA 0
- PIGL 0
- PIGM 4
- PIGN 0
- PIGO 0
- PIGS 2
- PIGT 1
- PIGV 0
- PIGW 1
- PINK1 1
- PITRM1 5
- PLA2G6 1
- PMM2 0
- PMPCA 2
- PMPCB 1
- PNP 1
- PNPLA2 3
- PNPLA8 3
- PNPO 1
- PNPT1 2
- POLG 4
- POLG2 4
- POLRMT 4
- POMGNT1 0
- POMGNT2 0
- POMK 2
- POMT1 0
- POMT2 0
- POR 1
- PPA2 1
- PPOX 3
- PPT1 1
- PRKAG2 2
- PRODH 2
- PRPS1 1
- PSAP 0
- PSAT1 1
- PTCD3 2
- PTS 2
- PUS1 4
- PYCR1 3
- PYGL 0
- PYGM 1
- QARS 5
- QDPR 1
- QRSL1 3
- RARS2 3
- RBCK1 2
- RBP4 2
- RFT1 0
- RMND1 3
- RNASEH1 3
- RNASEH2A 4
- RNASEH2B 4
- RNASEH2C 4
- RPIA 2
- RPL10 1
- RRM2B 3
- RTN4IP1 2
- SACS 2
- SAMHD1 3
- SAR1B 2
- SARS2 2
- SC5D 2
- SCO1 2
- SCO2 2
- SCP2 0
- SDHA 4
- SDHAF1 2
- SDHB 3
- SDHD 3
- SEC23B 2
- SERAC1 3
- SETX 2
- SFXN4 3
- SGSH 0
- SHMT2 2
- SI 2
- SKIV2L 2
- SLC12A3 2
- SLC13A3 3
- SLC16A1 1
- SLC17A5 1
- SLC18A2 2
- SLC19A2 3
- SLC19A3 3
- SLC22A5 2
- SLC25A1 4
- SLC25A12 4
- SLC25A13 1
- SLC25A15 0
- SLC25A19 3
- SLC25A20 1
- SLC25A22 3
- SLC25A24 3
- SLC25A26 2
- SLC25A3 3
- SLC25A32 1
- SLC25A36 3
- SLC25A38 2
- SLC25A4 3
- SLC25A42 3
- SLC25A46 2
- SLC2A1 2
- SLC2A2 0
- SLC30A10 1
- SLC35A1 2
- SLC35A2 3
- SLC35C1 0
- SLC35D1 0
- SLC37A4 2
- SLC39A14 1
- SLC39A4 2
- SLC39A8 2
- SLC3A1 2
- SLC40A1 1
- SLC46A1 0
- SLC52A2 2
- SLC52A3 3
- SLC5A1 2
- SLC5A6 2
- SLC6A19 3
- SLC6A3 2
- SLC6A8 2
- SLC7A7 0
- SLC7A9 2
- SMPD1 1
- SPATA5 5
- SPG7 7
- SPR 2
- SPTLC1 3
- SPTLC2 2
- SQOR 3
- SRD5A3 0
- SSBP1 3
- SSR4 0
- ST3GAL3 2
- ST3GAL5 0
- STS 2
- STT3A 3
- SUCLA2 3
- SUCLG1 2
- SUMF1 1
- SUOX 1
- SUPV3L1 2
- SURF1 3
- TACO1 2
- TALDO1 1
- TAMM41 3
- TANGO2 5
- TARS2 3
- TAT 2
- TAZ 3
- TCN2 2
- TEFM 3
- TFAM 3
- TFR2 1
- TH 2
- TIMM50 2
- TIMM8A 3
- TIMMDC1 3
- TK2 3
- TMEM126B 4
- TMEM165 0
- TMEM199 2
- TMEM5 1
- TMEM70 1
- TOMM7 3
- TOP3A 2
- TPK1 3
- TPP1 1
- TRAP1 2
- TREX1 2
- TRIM37 0
- TRIT1 3
- TRMT10C 3
- TRMT5 4
- TRMU 3
- TRNT1 2
- TRPM6 1
- TRPM7 2
- TSFM 3
- TTC19 1
- TTC37 3
- TTPA 2
- TUFM 6
- TUSC3 0
- TWNK 5
- TYMP 3
- UGGT1 3
- UGT1A1 3
- UMOD 2
- UMPS 1
- UPB1 3
- UQCC2 5
- UQCRB 5
- UQCRC2 6
- UQCRFS1 3
- UROD 2
- UROS 2
- VARS2 2
- VIPAS39 2
- VKORC1 2
- VPS16 1
- VPS33A 1
- VPS33B 2
- WARS2 3
- WDR45 1
- WFS1 3
- XDH 1
- XPNPEP3 4
- XYLT1 1
- XYLT2 0
- YARS2 2
- ALG13 1
- ALG2 2
- ATP5B 4
- ATP6AP2 1
- CD320 2
- CLCN7 2
- COA3 3
- COASY 1
- COG3 2
- COX4I2 3
- CSTB 1
- DCC 1
- DHDDS 1
- EHHADH 2
- ERAL1 1
- FOCAD 1
- GATC 2
- IDH1 4
- LDHD 2
- LIPC 2
- MRPS14 1
- MRPS16 5
- MRPS23 5
- MRPS7 2
- MT-RNR2 3
- NDUFA5 2
- NDUFB9 4
- OPLAH 2
- PAICS 1
- PET117 1
- PSPH 2
- PTPMT1 2
- RANBP2 2
- RNASET2 2
- RYR1 1
- SDHAF2 4
- SDHC 3
- SLC31A1 1
- SLC6A5 1
- SSR3 2
- STAT2 7
- TKFC 1
- TMEM251 1
- TMEM65 1
- TRAPPC11 1
- UQCC3 3
- UQCRC1 2
- UQCRQ 2
- UROC1 2
- USMG5 1
- YME1L1 1
- ABCG2 1
- ACAT2 2
- ALDH1B1 2
- ALG10 2
- AMPD1 2
- AOX1 1
- ATAD3B 2
- ATP5C1 3
- ATP5G1 3
- ATP5G2 3
- ATP5I 3
- ATP5J 3
- ATXN7 2
- BCAT1 1
- BOLA1 1
- BOLA2 1
- C1GALT1C1 1
- CAD 0
- CAMLG 1
- CEP89 3
- CETP 1
- CLCN6 1
- CLPS 1
- CNDP1 1
- COA1 2
- COA5 4
- COG2 0
- COX5B 1
- COX6C 1
- COX7A1 1
- COX7A2 1
- COX7B2 1
- COX7C 1
- COX8A 3
- CYP7A1 1
- DHFR2 1
- DLST 3
- DMGDH 1
- DPEP1 1
- DTD1 0
- ECSIT 2
- EGF 1
- ERCC6L2 0
- FAR1 2
- FBP2 1
- FOLR2 1
- FOLR3 1
- FXYD2 1
- GALNT12 1
- GATB 2
- GGT1 2
- HAL 1
- HYKK 1
- IDH3B 2
- KCTD7 1
- KHK 1
- LACTB 1
- LIPI 1
- MRPL12 4
- MRPL40 2
- MTHFD1 1
- NAT8L 1
- NDUFA3 2
- NDUFA7 1
- NDUFAB1 1
- NDUFB1 1
- NDUFB2 1
- NDUFB4 1
- NDUFB5 1
- NDUFB6 1
- NDUFC1 1
- NDUFS5 2
- NDUFV3 2
- NT5C 1
- NUP62 1
- OSTC 2
- OXA1L 2
- PCYT2 1
- PDK1 3
- PDK2 2
- PDK4 2
- PDP2 4
- PDPR 5
- PDXK 1
- PEX11A 1
- PHKG1 1
- PHYKPL 1
- PNLIP 1
- PNPLA4 1
- POP1 1
- PPM1B 1
- PPM1K 1
- PREPL 2
- PTCD1 1
- PTPRZ1 1
- ROBO3 4
- SARDH 1
- SCARB1 1
- SHPK 1
- SLC22A4 1
- SLC25A2 1
- SLC25A40 1
- SLC26A6 1
- SLC27A5 1
- SLC35A3 0
- SLC36A2 2
- SLC52A1 1
- SLC6A20 2
- SLCO1B1 1
- SLCO1B3 1
- SRRT 2
- STT3B 0
- SUCLG2 2
- SUGCT 1
- TCN1 2
- TDO2 1
- TIMM44 1
- TM6SF2 1
- TMEM126A 3
- TPMT 1
- TREH 1
- TXN2 4
- UQCRH 1
- USF1 1
- VPS13C 5
Likely inborn error of metabolism
Gene: GLRA1 Green List (high evidence)EnsemblGeneIds (GRCh38): ENSG00000145888
EnsemblGeneIds (GRCh37): ENSG00000145888
OMIM: 138491, Gene2Phenotype
GLRA1 is in 13 panels
1 review
Sarah Leigh (Genomics England Curator)
Green List (high evidence)
Comment when marking as ready: Associated with phenotype in OMIM, not in G2P / DD. At least 9 autosomal dominant variants reported and at least 6 biallelic variants reportedCreated: 23 Jan 2017, 12:41 p.m.
Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Panel version: Imported from Undiagnosed metabolic disorders panel version 0.248
Details
- Mode of Inheritance
- BOTH monoallelic and biallelic, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Phenotypes
-
- Hyperekplexia, hereditary 1, 149400
- OMIM
- 138491
- Clinvar variants
- Variants in GLRA1
- Penetrance
- None
- Panels with this gene
-
- Likely inborn error of metabolism
- Dystonia, chorea or related movement disorder, childhood onset
- Dystonia, chorea or related movement disorder, adult onset
- Undiagnosed metabolic disorders
- Paediatric or syndromic cardiomyopathy
- Early onset or syndromic epilepsy
- Brain channelopathy
- Neurodegenerative disorders, adult onset
- Hereditary ataxia, adult onset
- DDG2P
- Paroxysmal central nervous system disorders
- Intellectual disability
- Sudden death in young people
History Filter Activity
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: GLRA1 were changed from Hyperekplexia, hereditary 1, autosomal dominant or recessive 149400 to Hyperekplexia, hereditary 1, 149400
Panel promoted to version 1.0
Ellen McDonagh (Genomics England Curator)Checked against super panel made up of the panel constituents. Ready to promote to version 1.
Created, Added New Source, Set mode of inheritance, Set Phenotypes
Ellen McDonagh (Genomics England Curator)gene: GLRA1 was added gene: GLRA1 was added to Inborn errors of metabolism. Sources: Expert Review Green Mode of inheritance for gene: GLRA1 was set to BOTH monoallelic and biallelic, autosomal or pseudoautosomal Phenotypes for gene: GLRA1 were set to Hyperekplexia, hereditary 1, autosomal dominant or recessive 149400