Likely inborn error of metabolism - targeted testing not possible
Gene: MAGT1Comment on list classification: This gene was part of an initial gene list collated by Emma Ashton on behalf of the London North GLH, for GMS Metabolic Consensus Specialist Test Group. Additional information was not provided, such as mode of inheritance and phenotype.
Associated with relevant phenotype in OMIM and as possible Gen2Phen gene. At least 3 variants reported in unrelated cases, together with mouse knock-out model (PMID 29581357).Created: 19 Aug 2019, 10:34 a.m. | Last Modified: 19 Aug 2019, 10:34 a.m.
Panel Version: 1.175
Comment on phenotypes: IAP-CDG (Disorders of protein N-glycosylation)Created: 19 Aug 2019, 9:36 a.m. | Last Modified: 19 Aug 2019, 9:36 a.m.
Panel Version: 1.171
Gene: magt1 has been classified as Green List (High Evidence).
Publications for gene: MAGT1 were set to 27604308; 27393411; 29581357; 25956530
Publications for gene: MAGT1 were set to 27604308; 27393411; 29581357
Publications for gene: MAGT1 were set to 27604308; 27393411
Phenotypes for gene: MAGT1 were changed from Combined B and T cell defect; Immunodeficiency, X-linked, with magnesium defect, Epstein-Barr virus infection and neoplasia 300853; IAP-CDG (Disorders of protein N-glycosylation) to Immunodeficiency, X-linked, with magnesium defect, Epstein-Barr virus infection and neoplasia 300853
Source NHS GMS was added to MAGT1. Source London North GLH was added to MAGT1.
Sarah Leigh: Associated with relevant pheno
Added phenotypes Immunodeficiency, X-linked, with magnesium defect, Epstein-Barr virus infection and neoplasia 300853; IAP-CDG (Disorders of protein N-glycosylation) for gene: MAGT1 Publications for gene MAGT1 were changed from 27604308 to 27604308; 27393411
gene: MAGT1 was added gene: MAGT1 was added to Inborn errors of metabolism. Sources: Expert Review Amber Mode of inheritance for gene: MAGT1 was set to X-LINKED: hemizygous mutation in males, biallelic mutations in females Publications for gene: MAGT1 were set to 27604308 Phenotypes for gene: MAGT1 were set to Combined B and T cell defect; IAP-CDG (Disorders of protein N-glycosylation)