- AARS2 3
- AASS 3
- ABAT 5
- ABCA1 1
- ABCB11 1
- ABCB4 1
- ABCB7 5
- ABCD1 2
- ABCD4 1
- ABCG5 1
- ABCG8 1
- ABHD12 1
- ABHD5 1
- ACACA 2
- ACAD8 1
- ACAD9 4
- ACADM 3
- ACADS 1
- ACADSB 1
- ACADVL 3
- ACAT1 1
- ACO2 5
- ACOX1 0
- ACOX2 2
- ACSF3 3
- ACY1 1
- ADA 3
- ADAR 1
- ADSL 1
- AFG3L2 4
- AGA 1
- AGK 3
- AGL 1
- AGPS 0
- AGXT 0
- AHCY 2
- AIFM1 2
- AKR1D1 1
- ALAD 1
- ALAS2 1
- ALDH18A1 2
- ALDH3A2 1
- ALDH4A1 1
- ALDH5A1 1
- ALDH6A1 1
- ALDH7A1 2
- ALDOA 1
- ALDOB 0
- ALG1 0
- ALG11 0
- ALG12 0
- ALG14 1
- ALG3 0
- ALG6 0
- ALG8 0
- ALG9 0
- ALPL 1
- AMACR 0
- AMN 1
- AMT 1
- ANO10 3
- APOA1 1
- APOA5 2
- APOB 2
- APOC2 1
- APOE 1
- APOPT1 3
- APRT 1
- APTX 3
- ARG1 0
- ARSA 1
- ARSB 0
- ARSE 1
- ARSG 3
- ARSK 2
- ASAH1 1
- ASL 0
- ASPA 1
- ASS1 0
- ATAD3A 5
- ATIC 2
- ATP13A2 1
- ATP5A1 6
- ATP5D 1
- ATP5E 4
- ATP5G3 5
- ATP5O 4
- ATP6AP1 0
- ATP6V0A2 0
- ATP7A 3
- ATP7B 1
- ATP8B1 1
- ATPAF2 2
- AUH 0
- B3GALNT2 0
- B3GALT6 0
- B3GAT3 0
- B3GLCT 1
- B4GALNT1 2
- B4GALT1 0
- B4GALT7 0
- BAAT 1
- BCAT2 3
- BCKDHA 0
- BCKDHB 0
- BCKDK 1
- BCS1L 2
- BOLA3 3
- BTD 2
- C12orf65 3
- C19orf12 7
- C19orf70 2
- C1QBP 2
- C2orf69 4
- CA5A 2
- CARS2 4
- CAT 0
- CBS 2
- CCDC115 1
- CHCHD10 3
- CHKB 6
- CHST14 0
- CHST3 0
- CHST6 0
- CHSY1 0
- CISD2 1
- CLDN16 1
- CLDN19 1
- CLN3 1
- CLN5 1
- CLN6 1
- CLN8 1
- CLPB 5
- CLPP 2
- CMPK2 3
- CNNM2 1
- COA6 3
- COA7 1
- COG1 0
- COG4 0
- COG5 0
- COG6 0
- COG7 0
- COG8 0
- COQ2 3
- COQ4 2
- COQ6 2
- COQ7 3
- COQ8A 4
- COQ8B 3
- COQ9 2
- COX10 2
- COX11 4
- COX14 3
- COX15 2
- COX18 4
- COX20 3
- COX4I1 3
- COX5A 3
- COX6A1 2
- COX6A2 4
- COX6B1 1
- COX7B 2
- CP 1
- CPOX 4
- CPS1 0
- CPT1A 1
- CPT2 4
- CREB3L3 4
- CRLS1 2
- CSGALNACT1 3
- CTH 1
- CTNS 1
- CTSA 1
- CTSC 1
- CTSD 1
- CTSF 1
- CTSK 1
- CUBN 1
- CYC1 2
- CYCS 5
- CYP27A1 1
- CYP7B1 1
- D2HGDH 1
- DARS 7
- DARS2 3
- DBH 2
- DBT 0
- DCXR 2
- DDC 2
- DDOST 2
- DGUOK 2
- DHCR24 1
- DHCR7 2
- DHFR 0
- DHODH 1
- DHRSX 7
- DHTKD1 7
- DLAT 3
- DLD 3
- DNA2 3
- DNAJC12 1
- DNAJC19 3
- DNAJC5 1
- DNM1L 3
- DNM2 3
- DOLK 0
- DPAGT1 0
- DPM1 0
- DPM2 2
- DPM3 2
- DPYD 2
- DPYS 1
- DYM 2
- EARS2 2
- EBP 1
- ECHS1 3
- EDEM3 1
- EHBP1L1 2
- ELAC2 2
- ENO3 2
- EOGT 2
- EPG5 1
- EPM2A 1
- ETFA 2
- ETFB 2
- ETFDH 3
- ETHE1 2
- EXT1 1
- EXT2 0
- FA2H 1
- FAH 1
- FARS2 3
- FASTKD2 2
- FBP1 0
- FBXL4 4
- FDX2 6
- FDXR 2
- FECH 3
- FGFR2 1
- FH 2
- FKRP 0
- FKTN 0
- FLAD1 3
- FMO3 1
- FOLR1 0
- FOXRED1 1
- FTCD 2
- FUCA1 1
- FUK 3
- FUT8 1
- FXN 7
- G6PC 2
- G6PC3 1
- GAA 2
- GABRG2 1
- GALC 1
- GALE 1
- GALK1 1
- GALM 2
- GALNS 0
- GALNT2 3
- GALNT3 0
- GALT 1
- GAMT 2
- GARS 3
- GATM 3
- GBA 1
- GBE1 1
- GCDH 1
- GCH1 1
- GCLC 1
- GCSH 4
- GDAP1 4
- GFER 2
- GFM1 2
- GFM2 3
- GFPT1 0
- GIF 2
- GK 1
- GLA 0
- GLB1 0
- GLDC 1
- GLRA1 1
- GLRX5 3
- GLS 4
- GLUD1 5
- GLUL 1
- GLYCTK 1
- GM2A 1
- GMPPA 2
- GMPPB 0
- GNE 2
- GNMT 1
- GNPAT 0
- GNPTAB 0
- GNPTG 0
- GNS 0
- GORAB 2
- GPD1 1
- GPHN 1
- GPIHBP1 1
- GRHPR 0
- GRN 3
- GSS 1
- GSTZ1 2
- GTPBP3 3
- GUK1 3
- GUSB 0
- GYG1 2
- GYS1 2
- GYS2 0
- HAAO 1
- HADH 1
- HADHA 2
- HADHB 2
- HAMP 1
- HARS2 5
- HCCS 2
- HCFC1 1
- HEXA 1
- HEXB 1
- HFE 1
- HFE2 2
- HGD 1
- HGSNAT 0
- HIBCH 3
- HLCS 2
- HMBS 4
- HMGCL 4
- HMGCS2 1
- HOGA1 0
- HPD 1
- HPDL 3
- HPRT1 1
- HPS1 1
- HS2ST1 2
- HSD11B2 1
- HSD17B10 2
- HSD17B4 0
- HSD3B7 2
- HSPA9 5
- HSPD1 2
- HTRA2 1
- HYAL1 2
- IARS2 3
- IBA57 2
- IDH2 2
- IDH3A 3
- IDS 0
- IDUA 0
- IER3IP1 6
- ISCA1 1
- ISCA2 5
- ISCU 4
- ISPD 1
- ITPA 1
- IVD 0
- KARS 5
- KIAA0391 3
- KYNU 2
- L2HGDH 1
- LAMP2 2
- LARGE1 2
- LARS 3
- LARS2 2
- LBR 1
- LCAT 1
- LCT 1
- LDHA 1
- LDLR 1
- LDLRAP1 1
- LETM1 4
- LFNG 3
- LIAS 3
- LIG3 4
- LIPA 1
- LIPT1 3
- LIPT2 4
- LMBRD1 1
- LMF1 1
- LONP1 2
- LPIN1 2
- LPL 1
- LRPPRC 3
- LYRM4 4
- LYRM7 3
- MAGT1 1
- MAN1B1 0
- MAN2B1 1
- MAN2B2 3
- MANBA 1
- MAOA 1
- MARS2 2
- MAT1A 2
- MCCC1 1
- MCCC2 1
- MCEE 0
- MCOLN1 0
- MDH2 1
- MECR 2
- MFF 2
- MFN2 3
- MFSD8 1
- MGAT2 0
- MGME1 3
- MICU1 2
- MIPEP 1
- MLYCD 0
- MMAA 0
- MMAB 0
- MMACHC 1
- MMADHC 1
- MOCS1 1
- MOCS2 1
- MOGS 1
- MPC1 3
- MPDU1 0
- MPI 0
- MPV17 2
- MRM2 2
- MRPL3 5
- MRPL39 3
- MRPL44 3
- MRPL49 2
- MRPS2 2
- MRPS22 2
- MRPS34 2
- MSMO1 1
- MSTO1 3
- MT-ATP6 3
- MT-ATP8 3
- MT-CO1 3
- MT-CO2 3
- MT-CO3 3
- MT-CYB 3
- MTFMT 4
- MTHFR 0
- MT-ND1 3
- MT-ND2 3
- MT-ND3 3
- MT-ND4 3
- MT-ND4L 3
- MT-ND5 3
- MT-ND6 3
- MTO1 2
- MTPAP 5
- MTR 1
- MT-RNR1 3
- MTRR 1
- MT-TA 3
- MT-TC 3
- MT-TD 3
- MT-TE 3
- MT-TF 3
- MT-TG 3
- MT-TH 3
- MT-TI 3
- MT-TK 3
- MT-TL1 3
- MT-TL2 3
- MT-TM 3
- MT-TN 3
- MTTP 1
- MT-TP 3
- MT-TQ 3
- MT-TR 3
- MT-TS1 3
- MT-TS2 3
- MT-TT 5
- MT-TV 3
- MT-TW 3
- MT-TY 3
- MUT 1
- MVK 1
- NADK2 3
- NAGA 1
- NAGLU 0
- NAGS 0
- NARS2 2
- NAXD 3
- NAXE 2
- NDUFA1 2
- NDUFA10 1
- NDUFA11 1
- NDUFA12 4
- NDUFA13 6
- NDUFA2 1
- NDUFA4 4
- NDUFA6 3
- NDUFA8 5
- NDUFA9 5
- NDUFAF1 1
- NDUFAF2 2
- NDUFAF3 1
- NDUFAF4 1
- NDUFAF5 2
- NDUFAF6 3
- NDUFAF8 1
- NDUFB10 4
- NDUFB11 2
- NDUFB3 2
- NDUFB7 4
- NDUFB8 2
- NDUFC2 2
- NDUFS1 1
- NDUFS2 1
- NDUFS3 1
- NDUFS4 1
- NDUFS6 1
- NDUFS7 1
- NDUFS8 1
- NDUFV1 1
- NDUFV2 2
- NEU1 0
- NFS1 6
- NFU1 3
- NGLY1 2
- NHLRC1 1
- NNT 2
- NPC1 1
- NPC2 1
- NSDHL 1
- NSUN3 3
- NT5C3A 1
- NT5E 2
- NUBPL 2
- NUS1 4
- OAT 0
- OCRL 2
- OGDH 5
- OPA1 4
- OPA3 2
- OTC 1
- OXCT1 1
- PAH 1
- PANK2 2
- PARS2 4
- PC 3
- PCBD1 1
- PCCA 0
- PCCB 0
- PCK1 2
- PCSK9 1
- PDE12 3
- PDHA1 3
- PDHB 3
- PDHX 3
- PDK3 6
- PDP1 3
- PDSS1 2
- PDSS2 2
- PEPD 1
- PET100 4
- PEX1 0
- PEX10 0
- PEX11B 0
- PEX12 0
- PEX13 0
- PEX14 1
- PEX16 0
- PEX19 0
- PEX2 0
- PEX26 0
- PEX3 0
- PEX5 1
- PEX6 2
- PEX7 0
- PFKM 2
- PGAM2 2
- PGAP2 0
- PGAP3 0
- PGK1 2
- PGM1 1
- PGM3 0
- PHGDH 1
- PHKA1 2
- PHKA2 0
- PHKB 1
- PHKG2 0
- PHYH 0
- PIGA 0
- PIGL 0
- PIGM 4
- PIGN 0
- PIGO 0
- PIGS 2
- PIGT 1
- PIGV 0
- PIGW 1
- PINK1 1
- PITRM1 5
- PLA2G6 1
- PMM2 0
- PMPCA 2
- PMPCB 1
- PNP 1
- PNPLA2 3
- PNPLA8 3
- PNPO 1
- PNPT1 2
- POLG 4
- POLG2 4
- POLRMT 4
- POMGNT1 0
- POMGNT2 0
- POMK 2
- POMT1 0
- POMT2 0
- POR 1
- PPA2 1
- PPOX 3
- PPT1 1
- PRKAG2 2
- PRODH 2
- PRPS1 1
- PSAP 0
- PSAT1 1
- PTCD3 2
- PTS 2
- PUS1 4
- PYCR1 3
- PYGL 0
- PYGM 1
- QARS 5
- QDPR 1
- QRSL1 3
- RARS2 3
- RBCK1 2
- RBP4 2
- RFT1 0
- RMND1 3
- RNASEH1 3
- RNASEH2A 4
- RNASEH2B 4
- RNASEH2C 4
- RPIA 2
- RPL10 1
- RRM2B 3
- RTN4IP1 2
- SACS 2
- SAMHD1 3
- SAR1B 2
- SARS2 2
- SC5D 2
- SCO1 2
- SCO2 2
- SCP2 0
- SDHA 4
- SDHAF1 2
- SDHB 3
- SDHD 3
- SEC23B 2
- SERAC1 3
- SETX 2
- SFXN4 3
- SGSH 0
- SHMT2 2
- SI 2
- SKIV2L 2
- SLC12A3 2
- SLC13A3 3
- SLC16A1 1
- SLC17A5 1
- SLC18A2 2
- SLC19A2 3
- SLC19A3 3
- SLC22A5 2
- SLC25A1 4
- SLC25A12 4
- SLC25A13 1
- SLC25A15 0
- SLC25A19 3
- SLC25A20 1
- SLC25A22 3
- SLC25A24 3
- SLC25A26 2
- SLC25A3 3
- SLC25A32 1
- SLC25A36 3
- SLC25A38 2
- SLC25A4 3
- SLC25A42 3
- SLC25A46 2
- SLC2A1 2
- SLC2A2 0
- SLC30A10 1
- SLC35A1 2
- SLC35A2 3
- SLC35C1 0
- SLC35D1 0
- SLC37A4 2
- SLC39A14 1
- SLC39A4 2
- SLC39A8 2
- SLC3A1 2
- SLC40A1 1
- SLC46A1 0
- SLC52A2 2
- SLC52A3 2
- SLC5A1 2
- SLC5A6 2
- SLC6A19 3
- SLC6A3 2
- SLC6A8 2
- SLC7A7 0
- SLC7A9 2
- SMPD1 1
- SPATA5 5
- SPG7 7
- SPR 2
- SPTLC1 3
- SPTLC2 2
- SQOR 3
- SRD5A3 0
- SSBP1 3
- SSR4 0
- ST3GAL3 2
- ST3GAL5 0
- STS 2
- STT3A 3
- SUCLA2 3
- SUCLG1 2
- SUMF1 1
- SUOX 1
- SUPV3L1 2
- SURF1 3
- TACO1 2
- TALDO1 1
- TAMM41 3
- TANGO2 5
- TARS2 3
- TAT 2
- TAZ 3
- TCN2 2
- TEFM 3
- TFAM 3
- TFR2 1
- TH 2
- TIMM50 2
- TIMM8A 2
- TIMMDC1 3
- TK2 3
- TMEM126B 4
- TMEM165 0
- TMEM199 2
- TMEM5 1
- TMEM70 1
- TOMM7 3
- TOP3A 2
- TPK1 3
- TPP1 1
- TRAP1 2
- TREX1 2
- TRIM37 0
- TRIT1 3
- TRMT10C 3
- TRMT5 4
- TRMU 3
- TRNT1 2
- TRPM6 1
- TRPM7 2
- TSFM 3
- TTC19 1
- TTC37 3
- TTPA 2
- TUFM 6
- TUSC3 0
- TWNK 5
- TYMP 3
- UGGT1 3
- UGT1A1 3
- UMOD 2
- UMPS 1
- UPB1 3
- UQCC2 5
- UQCRB 5
- UQCRC2 6
- UQCRFS1 3
- UROD 2
- UROS 2
- VARS2 2
- VIPAS39 2
- VKORC1 2
- VPS16 1
- VPS33A 1
- VPS33B 2
- WARS2 3
- WDR45 1
- WFS1 3
- XDH 1
- XPNPEP3 4
- XYLT1 1
- XYLT2 0
- YARS2 2
- ALG13 1
- ALG2 2
- ATP5B 4
- CD320 2
- CLCN7 1
- COA3 3
- COASY 1
- COG3 2
- COX4I2 3
- CSTB 1
- DCC 1
- DHDDS 1
- EHHADH 2
- ERAL1 1
- GATC 2
- IDH1 4
- LDHD 2
- LIPC 2
- MRPS14 1
- MRPS16 5
- MRPS7 2
- MT-RNR2 3
- NDUFA5 2
- NDUFB9 4
- OPLAH 2
- PAICS 1
- PET117 1
- PSPH 2
- RANBP2 2
- RNASET2 2
- RYR1 1
- SDHAF2 4
- SDHC 3
- SLC31A1 1
- SLC6A5 1
- SSR3 2
- STAT2 7
- TKFC 1
- TMEM65 1
- TRAPPC11 1
- UQCC3 3
- UQCRC1 2
- UQCRQ 2
- UROC1 2
- YME1L1 1
- ABCG2 1
- ACAT2 2
- ALDH1B1 2
- ALG10 2
- AMPD1 2
- AOX1 1
- ATAD3B 2
- ATP5C1 3
- ATP5G1 3
- ATP5G2 3
- ATP5I 3
- ATP5J 3
- ATXN7 2
- BCAT1 1
- BOLA1 1
- BOLA2 1
- C1GALT1C1 1
- CAD 0
- CAMLG 1
- CEP89 3
- CETP 1
- CLCN6 1
- CLPS 1
- CNDP1 1
- COA1 2
- COA5 4
- COG2 0
- COX5B 1
- COX6C 1
- COX7A1 1
- COX7A2 1
- COX7B2 1
- COX7C 1
- COX8A 3
- CYP7A1 1
- DHFR2 1
- DLST 3
- DMGDH 1
- DPEP1 1
- DTD1 0
- ECSIT 2
- EGF 1
- ERCC6L2 0
- FAR1 2
- FBP2 1
- FOLR2 1
- FOLR3 1
- FXYD2 1
- GALNT12 1
- GATB 2
- GGT1 2
- HAL 1
- HYKK 1
- IDH3B 2
- KCTD7 1
- KHK 1
- LACTB 1
- LIPI 1
- MRPL12 4
- MRPL40 2
- MRPS23 4
- MTHFD1 1
- NAT8L 1
- NDUFA3 2
- NDUFA7 1
- NDUFAB1 1
- NDUFB1 1
- NDUFB2 1
- NDUFB4 1
- NDUFB5 1
- NDUFB6 1
- NDUFC1 1
- NDUFS5 2
- NDUFV3 2
- NT5C 1
- NUP62 1
- OSTC 2
- OXA1L 2
- PCYT2 1
- PDK1 3
- PDK2 2
- PDK4 2
- PDP2 4
- PDPR 5
- PDXK 1
- PEX11A 1
- PHKG1 1
- PHYKPL 1
- PNLIP 1
- PNPLA4 1
- POP1 1
- PPM1B 1
- PPM1K 1
- PREPL 2
- PTCD1 1
- PTPRZ1 1
- ROBO3 4
- SARDH 1
- SCARB1 1
- SHPK 1
- SLC22A4 1
- SLC25A2 1
- SLC25A40 1
- SLC26A6 1
- SLC27A5 1
- SLC35A3 0
- SLC36A2 2
- SLC52A1 1
- SLC6A20 2
- SLCO1B1 1
- SLCO1B3 1
- SRRT 2
- STT3B 0
- SUCLG2 2
- SUGCT 1
- TCN1 2
- TDO2 1
- TIMM44 1
- TM6SF2 1
- TMEM126A 3
- TPMT 1
- TREH 1
- TXN2 4
- UQCRH 1
- USF1 1
- VPS13C 5
Likely inborn error of metabolism
Gene: LIAS Green List (high evidence)EnsemblGeneIds (GRCh38): ENSG00000121897
EnsemblGeneIds (GRCh37): ENSG00000121897
OMIM: 607031, Gene2Phenotype
LIAS is in 10 panels
3 reviews
Carl Fratter (Oxford University Hospitals NHS Trust)
Green List (high evidence)
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Variants in this GENE are reported as part of current diagnostic practice
Panel version: Imported from Mitochondrial disorders panel version 0
Ellen McDonagh (Genomics England Curator)
Comment on mode of inheritance: Confirmed on OMIM.Created: 10 Feb 2016, 12:33 p.m.
Comment on list classification: Both reviewers agree this gene should be promoted from red to green.Created: 10 Feb 2016, 12:33 p.m.
Panel version: Imported from Mitochondrial disorders panel version 0.179
Shamima Rahman (UCL Institute of Child Health)
Green List (high evidence)
Panel version: Imported from Mitochondrial disorders panel version 0.37
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- London North GLH
- NHS GMS
- Expert Review Green
- Phenotypes
-
- Pyruvate dehydrogenase lipoic acid synthetase deficiency, 614462
- Defective Fe-S/lipoic acid biosynthesis (Mitochondrial respiratory chain disorders (caused by nuclear variants only))
- OMIM
- 607031
- Clinvar variants
- Variants in LIAS
- Penetrance
- None
- Publications
- Panels with this gene
-
- Childhood onset dystonia, chorea or related movement disorder
- Mitochondrial disorders
- Likely inborn error of metabolism
- Pyruvate dehydrogenase (PDH) deficiency
- Undiagnosed metabolic disorders
- Intellectual disability
- DDG2P
- Possible mitochondrial disorder - nuclear genes
- Fetal anomalies
- Early onset or syndromic epilepsy
History Filter Activity
Added New Source, Added New Source
Ivone Leong (Genomics England Curator)Source NHS GMS was added to LIAS. Source London North GLH was added to LIAS.
Panel promoted to version 1.0
Ellen McDonagh (Genomics England Curator)Ellen McDonagh: Comment on mode of pathogenici
Set Phenotypes, Set publications
Ellen McDonagh (Genomics England Curator)Added phenotypes Pyruvate dehydrogenase lipoic acid synthetase deficiency, 614462; Defective Fe-S/lipoic acid biosynthesis (Mitochondrial respiratory chain disorders (caused by nuclear variants only)) for gene: LIAS Publications for gene LIAS were changed from to 27604308
Created, Added New Source, Set mode of inheritance, Set Phenotypes
Ellen McDonagh (Genomics England Curator)gene: LIAS was added gene: LIAS was added to Inborn errors of metabolism. Sources: Expert Review Green Mode of inheritance for gene: LIAS was set to BIALLELIC, autosomal or pseudoautosomal Phenotypes for gene: LIAS were set to Pyruvate dehydrogenase lipoic acid synthetase deficiency, 614462