Genes in panel

Likely inborn error of metabolism

Gene: TEFM

Amber List (moderate evidence)

TEFM (transcription elongation factor, mitochondrial)
EnsemblGeneIds (GRCh38): ENSG00000172171
EnsemblGeneIds (GRCh37): ENSG00000172171
OMIM: 616422, Gene2Phenotype
TEFM is in 4 panels

3 reviews

Sarah Leigh (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green and the mode of inheritance set to BIALLELIC, autosomal or pseudoautosomal following NHS Genomic Medicine Service approval.
Created: 2 May 2024, 10:34 a.m. | Last Modified: 2 May 2024, 10:34 a.m.
Panel Version: 6.3

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

Comment on list classification: TEFM has already been promoted to green rating on Mitochondrial disorders panel (https://panelapp.genomicsengland.co.uk/panels/112/gene/TEFM/) as detailed in the below reviews copied from that panel.

As there is sufficient evidence available for the gene-disease association, this gene can be promoted to green rating on this panel in the next GMS update.
Created: 11 Jun 2025, 5:04 a.m. | Last Modified: 11 Jun 2025, 5:04 a.m.
Panel Version: 8.54
Comment on list classification: As reviewed by Hannah Knight, there is sufficient evidence available (five unrelated families) for the association of this gene with green rating in the next GMS review.
Created: 11 Dec 2023, 3:48 p.m. | Last Modified: 11 Dec 2023, 3:48 p.m.
Panel Version: 4.117

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Combined oxidative phosphorylation deficiency 58, OMIM:620451

Publications

Hannah Knight (NIHR BioResource - University of Cambridge)

Green List (high evidence)

PMID: 36823193 (2023) report seven TEFM variants (four missense, two frameshift and one in-frame 2-amino acid deletion) in seven individuals from five unrelated families who present with mitochondrial respiratory chain deficiency and a wide range of infantile or childhood-onset neurological and neuromuscular symptoms, due to abnormal mitochondrial transcription. Zebrafish model as well
Sources: Literature
Created: 4 Dec 2023, 1:32 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Combined oxidative phosphorylation deficiency 58

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
  • NHS GMS
Phenotypes
  • Combined oxidative phosphorylation deficiency 58, OMIM:620451
Tags
Q2_25_ promote_green
OMIM
616422
Clinvar variants
Variants in TEFM
Penetrance
None
Publications
Panels with this gene

History Filter Activity

11 Jun 2025, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: tefm has been classified as Amber List (Moderate Evidence).

10 Jun 2025, Gel status: 2

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_25_ promote_green tag was added to gene: TEFM.

10 Jun 2025, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: tefm has been classified as Amber List (Moderate Evidence).

10 Jun 2025, Gel status: 3

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

gene: TEFM was added gene: TEFM was added to Likely inborn error of metabolism. Sources: Expert Review Green,NHS GMS,Literature Mode of inheritance for gene: TEFM was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: TEFM were set to 36823193 Phenotypes for gene: TEFM were set to Combined oxidative phosphorylation deficiency 58, OMIM:620451