Description
This panel is used for clinical indication 'R58 Adult onset neurodegenerative disorder' in the NHS Genomic Medicine Service.

Further information on the testing criteria and any overlapping clinical indications can be found within (https://www.england.nhs.uk/publication/national-genomic-test-directories/) under 'R58 Adult onset neurodegenerative disorder'.

A version of this panel has been signed off under NHS Genomic Medicine Service governance (see 'Latest signed off version' in the panel header information).

This panel will continue to be curated based on external reviews and Genomics England curation. New changes will be reflected in an increase to the minor version of the panel and details of these can be viewed in the 'Panel Activity' page. Periodically, these changes will be reviewed by a NHS Genomic Medicine Service evaluation process. The content that is agreed for the GMS panels will be reflected in an updated signed off version number.

CNVs, STRs and genes encoded by the mitochondrial genome may not be routinely included in the analysis where the panel is NOT delivered by WGS. Please contact your Genomic Laboratory Hub for information regarding specific queries.

Some of the genes in this panel cause conditions that typically present in adulthood. Please consider this when applying the panel.

This panel has been initially created as a merge of genomic entities from the following 7 panels: 
- Hereditary ataxia v1.148
- Hereditary spastic paraplegia v 1.185
- Early onset dystonia v1.68
- Parkinson Disease and Complex Parkinsonism v1.64
- Brain channelopathy v1.46
- Early onset dementia (encompassing fronto-temporal dementia and prion disease) v1.45
- Amyotrophic lateral sclerosis/motor neuron disease v1.26

22 reviewers

  • Tracy Lester (Genetics laboratory, Oxford UK)

    Group: NHS Genomic Medicine Centre
    Workplace: NHS diagnostic lab

  • Ian Berry (Leeds Genetics Laboratory)

    Group: Other NHS organisation
    Workplace: NHS diagnostic lab

  • Sarah Leigh (Genomics England Curator)

    Group: Other
    Workplace: Other

  • alisdair mcneill (Sheffield childrens hospital)

    Group: NHS Genomic Medicine Centre
    Workplace: NHS clinical service

  • Rebecca Foulger (Genomics England curator)

    Group: Other
    Workplace: Other

  • James Polke (Neurogenetics Laboratory, Institute of Neurology, London)

    Group: GeCIP domain
    Workplace: NHS diagnostic lab

  • Louise Daugherty (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Arianna Tucci (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Helen Brittain (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Eleanor Williams (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Zornitza Stark (Australian Genomics)

    Group: Other
    Workplace: Other clinical service

  • Ivone Leong (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Anthony Dallosso (Bristol Genetics Laboratory)

    Group: NHS Genomic Medicine Centre
    Workplace: NHS diagnostic lab

  • Nick Beauchamp (Sheffield Diagnostic Genetics Service)

    Group: GeCIP domain
    Workplace: NHS diagnostic lab

  • Catherine Snow (Genomics England)

    Group: Other
    Workplace: Other

  • Arina Puzriakova (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Louise Daugherty (Healx)

    Group: Other biotech or pharmaceutical
    Workplace: Industry

  • James Polke (North Thames GLH)

    Group: Other NHS organisation
    Workplace: NHS diagnostic lab

  • Katherine Schon (University of Cambridge)

    Group: GeCIP domain
    Workplace: NHS clinical service

  • Achchuthan Shanmugasundram (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Hannah Knight (NIHR BioResource - University of Cambridge)

    Group: Other
    Workplace: Research lab

  • Jemeen Sreedharan (King's College London)

    Group: Other NHS organisation
    Workplace: Research lab

434 Entities

387 reviewed, 118 green

List Entity Reviews Mode of inheritance Details
434 Entitiess
Green Green List (high evidence)
ABCD1
5 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Hereditary spastic paraplegia, MONDO:0019064
  • adrenal failure
  • VLCFA accumulation
  • spastic paraparesis
Tags
Green Green List (high evidence)
AFG3L2
4 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 28, OMIM:610246
  • Ataxia, spastic, 5, autosomal recessive, OMIM:614487
  • Dystonia
Tags
Green Green List (high evidence)
ALS2
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 2, juvenile, OMIM:205100
  • Primary lateral sclerosis, juvenile, OMIM:606353
Tags
Green Green List (high evidence)
ANG
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 9, 611895
Tags
Green Green List (high evidence)
ANXA11
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Amytrophic lateral sclerosis 23, OMIM:617839
Tags
Green Green List (high evidence)
APP
5 reviews
4 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Alzheimer disease 1, familial, OMIM:104300
  • Cerebral amyloid angiopathy, Dutch, Italian, Iowa, Flemish, Arctic variants, OMIM:605714
Tags
Green Green List (high evidence)
AR_CAG
STR
2 reviews
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spinal and bulbar muscular atrophy of Kennedy, OMIM:313200
Tags
  • STR
Green Green List (high evidence)
ARSA
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Metachromatic leukodystrophy, OMIM:250100
  • Dystonia
Tags
Green Green List (high evidence)
ATN1_CAG
STR
5 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dentatorubral-pallidoluysian atrophy, OMIM:125370
Tags
  • STR
Green Green List (high evidence)
ATP13A2
5 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Kufor-Rakeb syndrome, OMIM:606693
  • Dystonia
  • Spastic paraplegia 78, autosomal recessive, OMIM:617225
Tags
Green Green List (high evidence)
ATP1A3
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • ALTERNATING HEMIPLEGIA OF CHILDHOOD 2, OMIM:614820
  • CAPOS syndrome, OMIM:601338
  • DYSTONIA 12, OMIM:128235
  • Rapid-Onset Dystonia-Parkinsonism
Tags
  • treatable
Green Green List (high evidence)
ATP7B
4 reviews
3 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Wilson disease, OMIM: 277900
  • Dystonia
Tags
  • treatable
Green Green List (high evidence)
AUH
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Green Green List (high evidence)
C19orf12
7 reviews
4 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • ?Spastic paraplegia 43, autosomal recessive, OMIM:615043
  • Neurodegeneration with brain iron accumulation 4, OMIM: 614298
Tags
Green Green List (high evidence)
C9orf72_GGGGCC
STR
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Frontotemporal dementia and/or amyotrophic lateral sclerosis 1, OMIM:105550
Tags
  • STR
Green Green List (high evidence)
CACNA1G
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 42, OMIM:616795
Tags
Green Green List (high evidence)
CCNF
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Frontotemporal dementia and/or amyotrophic lateral sclerosis 5, OMIM:619141
Tags
Green Green List (high evidence)
CHCHD10
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • ?Myopathy, isolated mitochondrial, autosomal dominant, OMIM:616209
Tags
Green Green List (high evidence)
CHCHD2
5 reviews
4 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Parkinson disease 22, autosomal dominant, OMIM:616710
Tags
Green Green List (high evidence)
CHMP2B
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Frontotemporal dementia and/or amytrophic lateral sclerosis 7, OMIM:600795
  • Dystonia
Tags
Green Green List (high evidence)
CLCN2
5 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukoencephalopathy with ataxia, OMIM:615651
Tags
Green Green List (high evidence)
CLN6
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ceroid lipofuscinosis, neuronal, 6, OMIM:601780
  • Ceroid lipofuscinosis, neuronal, Kufs type, adult onset, OMIM:204300
Tags
Green Green List (high evidence)
COASY
4 reviews
3 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • COASY protein-associated neurodegeneration
  • Neurodegeneration with brain iron accumulation 6, OMIM:615643
Tags
Green Green List (high evidence)
COL4A1
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Brain small vessel disease with or without ocular anomalies, OMIM:175780
  • Angiopathy, hereditary, with nephropathy, aneurysms, and muscle cramps, OMIM:611773
  • Microangiopathy and leukoencephalopathy, pontine, autosomal dominant, OMIM:618564
  • {Hemorrhage, intracerebral, susceptibility to}, OMIM:614519
Tags
Green Green List (high evidence)
COL4A2
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Brain small vessel disease 2, OMIM:614483
  • {Hemorrhage, intracerebral, susceptibility to}, OMIM:614519
Tags
Green Green List (high evidence)
CP
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Cerebellar ataxia, OMIM:604290
  • Hemosiderosis, systemic, due to aceruloplasminemia, OMIM:604290
Tags
Green Green List (high evidence)
CSF1R
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • dementia, motor dysfunction (can include spasticity, ataxia, and parkinsonism) and epilepsy
  • Leukoencephalopathy, diffuse hereditary, with spheroids, OMIM:221820
Tags
  • adult-onset
Green Green List (high evidence)
CTSA
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Cathepsin A-related arteriopathy-strokes-leukoencephalopathy, MONDO:0035551
Tags
Green Green List (high evidence)
CTSF
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ceroid lipofuscinosis, neuronal, 13, Kufs type, OMIM:615362
Tags
Green Green List (high evidence)
CYP27A1
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Cerebrotendinous xanthomatosis, OMIM:213700
  • progressive lower extremity spasticity,often disproportionate to any degree of weakness
Tags
Green Green List (high evidence)
CYP7B1
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 5A, autosomal recessive, OMIM:270800
Tags
Green Green List (high evidence)
DARS2
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukoencephalopathy with brain stem and spinal cord involvement and lactate elevation, OMIM:611105
Tags
Green Green List (high evidence)
DCTN1
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Neuropathy, distal hereditary motor, type VIIB, OMIM:607641
  • Perry syndrome, OMIM:168605
  • {Amyotrophic lateral sclerosis, susceptibility to}, OMIM:105400
Tags
Green Green List (high evidence)
DNAJB2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Spinal muscular atrophy, distal, autosomal recessive, 5, OMIM:614881
  • young adult-onset distal hereditary motor neuropathy, MONDO:0013947
Tags
Green Green List (high evidence)
DNAJC5
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ceroid lipofuscinosis, neuronal, 4, Parry type, OMIM:162350
Tags
Green Green List (high evidence)
DNAJC6
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Parkinson disease 19b, early-onset, OMIM:615528
  • Parkinson disease 19a juvenile-onset, OMIM:615528
  • juvenile onset Parkinson disease 19A, MONDO:0014231
Tags
Green Green List (high evidence)
DNMT1
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Cerebellar ataxia, deafness, and narcolepsy, autosomal dominant, OMIM:604121
Tags
Green Green List (high evidence)
EIF2B1
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukoencephalopathy with vanishing white matter, OMIM:603896
Tags
Green Green List (high evidence)
EIF2B2
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukoencephalopathy with vanishing white matter, OMIM:603896
Tags
Green Green List (high evidence)
EIF2B3
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukoencephalopathy with vanishing white matter, OMIM:603896
Tags
Green Green List (high evidence)
EIF2B4
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukoencephalopathy with vanishing white matter, OMIM:603896
Tags
Green Green List (high evidence)
EIF2B5
4 reviews
3 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukoencephalopathy with vanishing white matter, OMIM:603896
Tags
Green Green List (high evidence)
ELOVL4
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 34, OMIM:133190
Tags
Green Green List (high evidence)
EPM2A
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Epilepsy, progressive myoclonic 2A (Lafora), OMIM:254780
Tags
Green Green List (high evidence)
ERBB4
4 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 19 OMIM:615515
  • amyotrophic lateral sclerosis type 19 MONDO:0014223
Tags
Green Green List (high evidence)
FBXO7
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Parkinson disease 15, autosomal recessive, OMIM:260300
Tags
Green Green List (high evidence)
FTL
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Neurodegeneration with brain iron accumulation 3, OMIM:606159
Tags
Green Green List (high evidence)
FUS
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 6, with or without frontotemporal dementia, OMIM:608030
Tags
Green Green List (high evidence)
GBE1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Polyglucosan body disease, adult form, OMIM:263570
  • adult polyglucosan body disease, MONDO:0009897
Tags
Green Green List (high evidence)
GCH1
6 reviews
2 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia, DOPA-responsive, with or without hyperphenylalaninemia, OMIM:128230
  • Hyperphenylalaninemia, BH4-deficient, B, OMIM:233910
  • Spastic paraplegia
Tags
Green Green List (high evidence)
GFAP
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Autosomal Dominant Ataxia
  • Alexander disease, OMIM:203450
Tags
Green Green List (high evidence)
GLA
3 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Fabry disease, OMIM:301500
Tags
Green Green List (high evidence)
GRN
7 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Frontotemporal lobar degeneration with ubiquitin-positive inclusions, OMIM:607485
  • Aphasia, primary progressive, OMIM:607485
  • Ceroid lipofuscinosis, neuronal, 11, OMIM:614706
Tags
Green Green List (high evidence)
GSN
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Amyloidosis, Finnish type, OMIM:105120
  • Finnish type amyloidosis, MONDO:0007097
Tags
Green Green List (high evidence)
HEXA
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • GM2-gangliosidosis, several forms, OMIM:272800
  • Tay-Sachs disease, OMIM:272800
Tags
Green Green List (high evidence)
HEXB
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Sandhoff disease, infantile, juvenile, and adult forms, OMIM:268800
Tags
Green Green List (high evidence)
HNRNPA1
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • ?Inclusion body myopathy wtih early-onset Paget disease without frontotemporal dementia type 3, OMIM:615424, Amyotrophic lateral sclerosis 20, OMIM:615426
Tags
Green Green List (high evidence)
HTRA1
3 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • dementia (disease), MONDO:0001627
  • CARASIL syndrome, OMIM:600142
  • Cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 2, OMIM:616779
Tags
Green Green List (high evidence)
HTT_CAG
STR
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Huntington disease, OMIM:143100
Tags
  • STR
Green Green List (high evidence)
ITM2B
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dementia, familial British, OMIM:176500
  • ABri amyloidosis, MONDO:0008306
  • Dementia, familial Danish, OMIM:117300
  • ADan amyloidosis, MONDO:0007297
Tags
Green Green List (high evidence)
JPH3_CTG
STR
4 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Huntington disease-like 2, OMIM:606438
Tags
  • STR
Green Green List (high evidence)
KCNC3
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 13, OMIM:605259
Tags
Green Green List (high evidence)
KCND3
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellarataxia19, OMIM:607346
Tags
Green Green List (high evidence)
KIAA1161
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Basal ganglia calcification, idiopathic, 7, autosomal recessive, OMIM:618317
Tags
  • gene-checked
  • new-gene-name
Green Green List (high evidence)
KIF5A
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 10, autosomal dominant, OMIM:604187
Tags
Green Green List (high evidence)
LAMB1
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Lissencephaly 5, OMIM:615191
  • cobblestone lissencephaly without muscular or ocular involvement, MONDO:0014077
Tags
Green Green List (high evidence)
LRRK2
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • LRRK2 G2019S mutation
  • {Parkinson disease 8}, OMIM:607060
Tags
  • curated-variant-list
  • missense
Green Green List (high evidence)
LYST
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Chediak-Higashi syndrome, OMIM:214500
  • peripheral neuropathy
  • Parkinsonism
  • spastic paraplegia
Tags
Green Green List (high evidence)
MAPT
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dementia, frontotemporal, with or without parkinsonism, OMIM:600274
  • Tauopathy and r
  • Supranuclear palsy, progressive, 601104
  • clinical presentation suggestive of cortico-basal/PSP syndrome
  • PARKINSON-DEMENTIA SYNDROME
  • {Parkinson disease, susceptibility to}, 168600
  • Pick disease, 172700
  • Clinical syndrome FTLD (Frontotemporal lobar degeneration)
  • Supranuclear palsy, progressive atypical, 260540
Tags
  • treatable
Green Green List (high evidence)
NEK1
4 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • {Amyotrophic lateral sclerosis, susceptibility to, 24}, OMIM:617892
  • amyotrophic lateral sclerosis, susceptibility to, 24, MONDO:0054750
Tags
Green Green List (high evidence)
NHLRC1
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Epilepsy, progressive myoclonic 2B (Lafora), OMIM:254780
Tags
Green Green List (high evidence)
NOTCH3
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Cerebral arteriopathy with subcortical infarcts and leukoencephalopathy 1, OMIM:125310
Tags
Green Green List (high evidence)
NPC1
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Niemann-Pick disease, type C1, OMIM:257220
  • Niemann-Pick disease, type D, OMIM:257220
Tags
Green Green List (high evidence)
NPC2
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Niemann-Pick disease, type C2, OMIM:607625
Tags
Green Green List (high evidence)
OPTN
4 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 12 with or without frontotemporal dementia, OMIM:613435
Tags
Green Green List (high evidence)
PANK2
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Neurodegeneration with brain iron accumulation 1, OMIM:234200
Tags
Green Green List (high evidence)
PARK7
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Parkinson disease 7, autosomal recessive early-onset, OMIM:606324
Tags
Green Green List (high evidence)
PDGFB
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Basal ganglia calcification, idiopathic, 5, OMIM:615483
Tags
Green Green List (high evidence)
PDGFRB
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Basal ganglia calcification, idiopathic, 4, OMIM:615007
Tags
Green Green List (high evidence)
PFN1
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 18, OMIM:614808
Tags
Green Green List (high evidence)
PINK1
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Parkinson disease 6, early onset, OMIM:605909
  • Dystonia
Tags
Green Green List (high evidence)
PLA2G6
5 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Parkinson disease 14, autosomal recessive, OMIM:612953
  • Neurodegeneration with brain iron accumulation 2B, OMIM:610217
Tags
Green Green List (high evidence)
PRKN
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Parkinson disease, juvenile, type 2, OMIM:600116
  • Dystonia
Tags
Green Green List (high evidence)
PRNP
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Creutzfeldt-Jakob disease, OMIM:123400
  • Huntington disease-like 1, OMIM:603218
  • Dementia
  • Gerstmann-Straussler disease, OMIM:137440
Tags
Green Green List (high evidence)
PSAP
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • {Parkinson disease 24, autosomal dominant, susceptibility to}, OMIM:619491
Tags
Green Green List (high evidence)
PSEN1
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Alzheimer disease, type 3, with spastic paraparesis and unusual plaques, OMIM:607822
  • Alzheimer disease, type 3, with spastic paraparesis and apraxia, OMIM:607822
  • Dystonia
  • Dementia, frontotemporal, OMIM:600274
  • Pick disease, OMIM:172700
  • Alzheimer disease, type 3, OMIM:607822
Tags
Green Green List (high evidence)
PSEN2
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Alzheimer disease-4, OMIM:606889
  • Alzheimer disease 4, MONDO:0011743
Tags
Green Green List (high evidence)
RNF216
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Cerebellar ataxia and hypogonadotropic hypogonadism, OMIM:212840
Tags
Green Green List (high evidence)
SETX
4 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 4, juvenile, OMIM:602433
Tags
Green Green List (high evidence)
SLC20A2
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Basal ganglia calcification, idiopathic, 1, OMIM:158378
Tags
Green Green List (high evidence)
SNCA
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Parkinson disease 4, OMIM:605543
  • Parkinson disease 1, OMIM:168601
  • Dementia, Lewy body, OMIM:127750
Tags
  • gene-duplication
Green Green List (high evidence)
SOD1
6 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 1, OMIM:105400
Tags
Green Green List (high evidence)
SPAST
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 4, autosomal dominant, OMIM:182601
  • hereditary spastic paraplegia 4, MONDO:0008438
Tags
Green Green List (high evidence)
SPG11
5 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • early onset parkinsonism, levo dopa responsve
  • Spastic paraplegia 11, autosomal recessive, OMIM:604360
  • Complex parkinsonism
  • hereditary spastic paraparesis
  • Amyotrophic lateral sclerosis 5, juvenile, OMIM:602099
Tags
Green Green List (high evidence)
SPG21
6 reviews
4 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic Paraplegia, Recessive
Tags
Green Green List (high evidence)
SPG7
6 reviews
3 green 3 red
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 7, autosomal recessive, OMIM:607259
  • hereditary spastic paraplegia 7, MONDO:0011803
Tags
Green Green List (high evidence)
SQSTM1
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Frontotemporal dementia and/or amyotrophic lateral sclerosis 3, OMIM:616437
Tags
Green Green List (high evidence)
SS18L1
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis, MONDO:0004976
Tags
  • gene-checked
Green Green List (high evidence)
STUB1
8 reviews
1 green 2 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Autosomal recessive spinocerebellar ataxia type 16, OMIM:615768
  • autosomal recessive spinocerebellar ataxia 16, MONDO:0014339
  • Spinocerebellar ataxia 48, OMIM:618093
  • spinocerebellar ataxia 48, MONDO:0032526
Tags
Green Green List (high evidence)
SYNJ1
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Parkinson disease 20, early-onset, OMIM:615530
Tags
Green Green List (high evidence)
TARDBP
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 10, with or without FTD, OMIM:612069
Tags
  • polygenic
Green Green List (high evidence)
TBK1
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Frontotemporal dementia and/or amyotrophic lateral sclerosis 4, OMIM:616439
Tags
Green Green List (high evidence)
TBP_CAG
STR
4 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 17, OMIM:607136
  • {Parkinson disease, susceptibility to}, OMIM:168600
Tags
  • STR
Green Green List (high evidence)
TMEM240
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 21, OMIM:607454
Tags
Green Green List (high evidence)
TREM2
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy 2, OMIM:618193
  • Dystonia
Tags
Green Green List (high evidence)
TREX1
3 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Aicardi-Goutieres syndrome 1, dominant and recessive, OMIM:225750
  • Vasculopathy, retinal, with cerebral leukoencephalopathy and systemic manifestations, OMIM:192315
Tags
Green Green List (high evidence)
TTC19
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Mitochondrial complex III deficiency, nuclear type 2, OMIM:615157
Tags
Green Green List (high evidence)
TTR
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Amyloidosis, hereditary, transthyretin-related, OMIM:105210
  • Carpal tunnel syndrome, familial, OMIM:115430
Tags
Green Green List (high evidence)
TYROBP
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy 1, OMIM:221770
Tags
Green Green List (high evidence)
UBQLN2
4 reviews
3 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 15, with or without frontotemporal dementia, OMIM:300857
Tags
Green Green List (high evidence)
VAPB
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 8, OMIM:608627
Tags
Green Green List (high evidence)
VCP
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Frontotemporal dementia and/or amyotrophic lateral sclerosis 6, OMIM:613954
Tags
Green Green List (high evidence)
VPS13A
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Choreoacanthocytosis, OMIM:200150
Tags
Green Green List (high evidence)
VPS35
4 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • {Parkinson disease 17}, OMIM:614203
Tags
  • missense
Green Green List (high evidence)
VRK1
7 reviews
2 green 4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Pontocerebellar hypoplasia type 1A, OMIM:607596
  • spinal muscular atrophy, MONDO:0001516
  • distal hereditary motor neuropathy, MONDO:0018894
  • familial amyotrophic lateral sclerosis, MONDO:0005144
Tags
Green Green List (high evidence)
WDR45
4 reviews
3 green 1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Neurodegeneration with brain iron accumulation 5, OMIM:300894
Tags
Green Green List (high evidence)
XK
3 reviews
3 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • McLeod syndrome with or without chronic granulomatous disease, OMIM:300842
  • McLeod neuroacanthocytosis syndrome, MONDO:0018945
Tags
Green Green List (high evidence)
XPR1
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Basal ganglia calcification, idiopathic, 6, OMIM:605237
Tags
Amber Amber List (moderate evidence)
AP5Z1
3 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 48, autosomal recessive, OMIM:613647
Tags
Amber Amber List (moderate evidence)
ARHGEF28
2 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis, MONDO:0004976
Tags
Amber Amber List (moderate evidence)
ATP2B3
3 reviews
1 red
Unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • ?Spinocerebellar ataxia, X-linked 1, OMIM:302500
Tags
Amber Amber List (moderate evidence)
ATP6AP2
3 reviews
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Amber
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • ?Parkinsonism with spasticity, X-linked, OMIM:300911
  • Mental retardation, X-linked, syndromic, Hedera type, OMIM:300423
Tags
  • watchlist
Amber Amber List (moderate evidence)
ATXN10_ATTCT
STR
3 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • South West GLH
Phenotypes
  • Spinocerebellar ataxia 10, OMIM:603516
Tags
  • STR
  • watchlist
Amber Amber List (moderate evidence)
ATXN1_CAG
STR
3 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • South West GLH
Phenotypes
  • Spinocerebellar ataxia 1, OMIM:164400
Tags
  • STR
  • watchlist
Amber Amber List (moderate evidence)
ATXN2_CAG
STR
4 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 2, OMIM:183090
  • {Amyotrophic lateral sclerosis, susceptibility to, 13}, OMIM:183090
  • {Parkinson disease, late-onset, susceptibility to}, OMIM:168600
Tags
  • STR
  • watchlist
Amber Amber List (moderate evidence)
ATXN3_CAG
STR
3 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Machado-Joseph disease, OMIM:109150
Tags
  • STR
  • watchlist
Amber Amber List (moderate evidence)
ATXN7_CAG
STR
3 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 7, OMIM:164500
Tags
  • STR
  • watchlist
Amber Amber List (moderate evidence)
CACNA1A_CAG
STR
4 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 6, OMIM:183086
Tags
  • STR
  • watchlist
Amber Amber List (moderate evidence)
CCDC88C
3 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • ?Spinocerebellar ataxia 40, OMIM:616053
Tags
Amber Amber List (moderate evidence)
CIZ1
5 reviews
3 red
Unknown
Sources
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia 23, MONDO:0013928
Tags
Amber Amber List (moderate evidence)
COQ2
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • {Multiple system atrophy, susceptibility to}, OMIM:146500
Tags
Amber Amber List (moderate evidence)
CST3
3 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Amber
  • NHS GMS
Phenotypes
  • Cerebral amyloid angiopathy, OMIM:105150
Tags
Amber Amber List (moderate evidence)
CSTB_CCCCGCCCCGCG
STR
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Epilepsy, progressive myoclonic 1A (Unverricht and Lundborg), OMIM:254800
Tags
  • STR
  • watchlist
Amber Amber List (moderate evidence)
DNAJC13
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Tags
Amber Amber List (moderate evidence)
DNAJC7
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • amyotrophic lateral sclerosis
Tags
  • Q4_23_promote_green
Amber Amber List (moderate evidence)
EIF4G1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • {Parkinsons disease 18}, OMIM:614251
Tags
Amber Amber List (moderate evidence)
EWSR1
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis, MONDO:0004976
Tags
Amber Amber List (moderate evidence)
FXN_GAA
STR
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Friedreich ataxia, OMIM:229300
  • Friedreich ataxia with retained reflexes, OMIM:229300
Tags
  • STR
  • watchlist
Amber Amber List (moderate evidence)
GBA
6 reviews
2 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • {Parkinson disease, late-onset, susceptibility to}, OMIM:168600
  • Gaucher disease, type I, OMIM:230800
Tags
  • new-gene-name
  • treatable
Amber Amber List (moderate evidence)
GCDH
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Glutaricaciduria, type I, OMIM:231670
Tags
Amber Amber List (moderate evidence)
GIGYF2
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • {Parkinson disease 11}, OMIM:607688
Tags
Amber Amber List (moderate evidence)
GLT8D1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • familial amyotrophic lateral sclerosis, MONDO:0005144
Tags
Amber Amber List (moderate evidence)
HNRNPA2B1
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis, MONDO:0004976
  • ?Inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 2, OMIM:615422
Tags
Amber Amber List (moderate evidence)
MARS2
4 reviews
1 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic ataxia 3, autosomal recessive, OMIM:611390
Tags
  • cnv
  • gene-duplication
Amber Amber List (moderate evidence)
MATR3
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 21, OMIM:606070
Tags
Amber Amber List (moderate evidence)
NAA60
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • NAA60 associated autosomal recessive primary familial brain calcifications
Tags
  • Q2_24_MOI
  • Q2_24_NHS_review
  • Q2_24_promote_green
Amber Amber List (moderate evidence)
NOP56_GGCCTG
STR
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 36, OMIM:614153
Tags
  • STR
  • watchlist
Amber Amber List (moderate evidence)
NR4A2
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism, OMIM:619911
Tags
Amber Amber List (moderate evidence)
PPP2R2B_CAG
STR
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 12, OMIM:604326
Tags
  • STR
  • watchlist
Amber Amber List (moderate evidence)
PRKRA
5 reviews
2 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia 16, OMIM:612067
Tags
Amber Amber List (moderate evidence)
PRPH
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • {Amyotrophic lateral sclerosis, susceptibility to}, OMIM:170710
Tags
Amber Amber List (moderate evidence)
SIGMAR1
4 reviews
2 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • ?Amyotrophic lateral sclerosis 16, juvenile, OMIM:614373
Tags
Amber Amber List (moderate evidence)
SLC30A10
5 reviews
2 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Hypermanganesemia with dystonia 1, OMIM:613280
Tags
  • treatable
Amber Amber List (moderate evidence)
SNCB
3 reviews
Unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dementia, Lewy body, OMIM:127750
Tags
Amber Amber List (moderate evidence)
SORL1
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • NHS GMS
Phenotypes
  • Alzheimer's Disease
Tags
Amber Amber List (moderate evidence)
TAF1
4 reviews
3 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia-Parkinsonism, X-linked, OMIM:314250
Tags
Amber Amber List (moderate evidence)
TUBA4A
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 22 with or without frontotemporal dementia, OMIM:616208
Tags
Amber Amber List (moderate evidence)
TUBB4A
5 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukodystrophy, hypomyelinating, 6, OMIM:612438
  • Dystonia 4, torsion, autosomal dominant, OMIM:128101
Tags
Amber Amber List (moderate evidence)
UQCRC1
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Parkinsonism with polyneuropathy, OMIM:619279
Tags
  • watchlist
Amber Amber List (moderate evidence)
VPS13C
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Parkinson disease 23, autosomal recessive, early onset, OMIM:616840
Tags
Red Red List (low evidence)
AAAS
4 reviews
1 green 3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Achalasia-addisonianism-alacrimia syndrome, OMIM:231550
  • Triple-A syndrome, MONDO:0009279
Tags
Red Red List (low evidence)
AARS
3 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Charcot-Marie-Tooth disease, axonal, type 2N, OMIM:613287
  • Charcot-Marie-Tooth disease axonal type 2N, MONDO:0013212
Tags
  • new-gene-name
Red Red List (low evidence)
ABCB7
4 reviews
4 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Anemia, sideroblastic, with ataxia,
  • Sideroblastic Anemia and Ataxia
Tags
Red Red List (low evidence)
ABHD12
4 reviews
2 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Polyneuropathy, Hearing Loss, Ataxia, Retinitis Pigmentosa and Cataract (PHARC)
  • Polyneuropathy, hearing loss, ataxia, retinitis pigmentosa, and cataract
Tags
Red Red List (low evidence)
ACTB
3 reviews
2 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia, juvenile-onset, 607371Baraitser-Winter syndrome 1, 243310
Tags
Red Red List (low evidence)
ADAR
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Aicardi-Goutieres syndrome 6, OMIM:615010
Tags
Red Red List (low evidence)
ADCY5
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • dystonia
  • Familial dyskinesia 606703
  • Dyskinesia, familial, with facial myokymia, 606703
Tags
Red Red List (low evidence)
AIMP1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukodystrophy, hypomyelinating, 3, 260600
Tags
Red Red List (low evidence)
ALAS2
3 reviews
2 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Tags
Red Red List (low evidence)
ALDH18A1
4 reviews
1 green 3 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 9A, autosomal dominant
  • ADCL3 AUTOSOMAL RECESSIVE MENTAL RETARDATION-JOINT HYPERMOBILITY-SKIN LAXITY WITH OR WITHOUT METABOLIC ABNORMALITIES (MRJHSL) SPASTIC PARAPLEGIA 9, AUTOSOMAL DOMINANT
  • Spastic paraplegia 9B, autosomal recessive CUTIS LAXA, AUTOSOMAL DOMINANT 3
  • SPG9
Tags
Red Red List (low evidence)
AMPD2
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia homozygous frameshift reported in single family (Novarino et al, 2014).
  • Hereditary Spastic Paraplegia?
  • Pontocerebellar hypoplasia 9 (#615809)
  • Pontocerebellar hypolplasia (biallelic)
Tags
Red Red List (low evidence)
ANO10
4 reviews
2 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia, autosomal recessive 10, 613728
Tags
Red Red List (low evidence)
ANO3
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia 24, 615034
  • familial form of cranio-cervical dystonia
Tags
Red Red List (low evidence)
AP1S2
4 reviews
3 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Pettigrew syndrome, OMIM:304340
Tags
Red Red List (low evidence)
AP4B1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 47, autosomal recessive, OMIM:614066
  • Hereditary spastic paraplegia 47, MONDO:0013551
Tags
Red Red List (low evidence)
AP4E1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 51, autosomal recessive, OMIM:613744
  • Hereditary spastic paraplegia 51, MONDO:0013401
Tags
Red Red List (low evidence)
AP4M1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 50, autosomal recessive
Tags
Red Red List (low evidence)
AP4S1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • developmental delay
  • seizures
  • Spastic paraplegia 52, autosomal recessive
Tags
Red Red List (low evidence)
APTX
4 reviews
2 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ataxia with Oculomotor Apraxia
  • Ataxia, early-onset, with oculomotor apraxia and hypoalbuminemia
  • Dystonia
Tags
Red Red List (low evidence)
AR
4 reviews
1 green 2 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinal and bulbar muscular atrophy of Kennedy, OMIM:313200
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
ARG1
5 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Argininemia, OMIM:207800
Tags
Red Red List (low evidence)
ARL6IP1
3 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Tags
Red Red List (low evidence)
ARSI
3 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Tags
Red Red List (low evidence)
ARX
3 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
ATCAY
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ataxia, cerebellar, Cayman type
  • Cerebellar Ataxia, Cayman type
Tags
Red Red List (low evidence)
ATL1
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 3A, autosomal dominant,
  • Spastic Paraplegia, Dominant
  • Spastic paraplegia 3A, autosomal dominant
Tags
Red Red List (low evidence)
ATM
4 reviews
1 green 3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ataxia-telangiectasia, OMIM:208900
Tags
Red Red List (low evidence)
ATN1
4 reviews
2 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dentatorubral-pallidoluysian atrophy, OMIM:125370
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
ATP1A2
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • alternating hemiplegia of childhood 104290
  • familial basilar migraine 602481
  • migraine
  • familial hemiplegic migraine type 2, 602481
Tags
  • treatable
Red Red List (low evidence)
ATP8A2
3 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Tags
Red Red List (low evidence)
ATXN1
4 reviews
2 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 1, OMIM:164400
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
ATXN10
4 reviews
2 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 10, OMIM:603516
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
ATXN2
4 reviews
2 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 2, OMIM:183090
  • {Amyotrophic lateral sclerosis, susceptibility to, 13}, OMIM:183090
  • {Parkinson disease, late-onset, susceptibility to}, OMIM:168600
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
ATXN3
4 reviews
2 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Machado-Joseph disease, OMIM:109150
  • Susceptibility to Late-Onset Parkinson Disease
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
ATXN7
5 reviews
1 green 2 red
Other
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 7, OMIM:164500
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
ATXN8
4 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 8 608768
Tags
  • currently-ngs-unreportable
  • ensembl_ids_known_missing
  • nucleotide-repeat-expansion
Red Red List (low evidence)
B4GALNT1
4 reviews
1 green 3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 26, autosomal recessive
Tags
Red Red List (low evidence)
BCAP31
3 reviews
1 green 2 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Deafness, dystonia and cerebellar hypomyelination, 300475
Tags
Red Red List (low evidence)
BEAN1
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 31 117210
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
  • structural-variant
Red Red List (low evidence)
BSCL2
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Silver spastic paraplegia syndrome, OMIM:270685
Tags
Red Red List (low evidence)
C12orf65
5 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 55, autosomal recessive, OMIM:615035
Tags
  • new-gene-name
Red Red List (low evidence)
C9orf72
4 reviews
2 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Frontotemporal dementia and/or amyotrophic lateral sclerosis 1, OMIM:105550
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
CA8
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Cerebellar ataxia and mental retardation with or without quadrupedal locomotion 3
Tags
Red Red List (low evidence)
CACNA1A
5 reviews
1 green 3 red
Other
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 6, OMIM:183086
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
CACNB4
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Episodic ataxia, type 5
  • EPILEPSY, IDIOPATHIC GENERALIZED, SUSCEPTIBILITY TO, 9
  • EPISODIC ATAXIA, TYPE 5
  • Episodic Ataxia
Tags
  • treatable
Red Red List (low evidence)
CAMTA1
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Cerebellarataxia, nonprogressive, with mental retardation, 614756
Tags
Red Red List (low evidence)
CAPN1
4 reviews
2 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 76 autosomal recessive 616907
Tags
Red Red List (low evidence)
CASK
4 reviews
4 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • FG syndrome 4, 300422
  • Mental retardation and microcephaly with pontine and cerebellar hypoplasia, 300749
Tags
Red Red List (low evidence)
CCT5
3 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Neuropathy, hereditary sensory, with spastic paraplegia
  • Sensory Neuropathy with Spastic Paraplegia
Tags
Red Red List (low evidence)
CDK16
5 reviews
4 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Intellectual disability and spastic paraplegia
Tags
Red Red List (low evidence)
CHMP1A
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Pontocerebellar hypoplasia, type 8, 614961
Tags
Red Red List (low evidence)
CLP1
3 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Pontocerebellar hypoplasia 10, 615803
Tags
Red Red List (low evidence)
COG5
6 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Congenital disorder of glycosylation, type IIi 613612
Tags
Red Red List (low evidence)
COQ8A
4 reviews
2 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Coenzyme Q10 deficiency, primary 4, 612016
  • Spinocerebellar Ataxia Type
Tags
Red Red List (low evidence)
COX20
4 reviews
3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Mitochondrial complex IV deficiency, 220110
Tags
Red Red List (low evidence)
CSTB
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Epilepsy, progressive myoclonic 1A (Unverricht and Lundborg), OMIM:254800
Tags
  • nucleotide-repeat-expansion
Red Red List (low evidence)
CWF19L1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia, autosomal recessive 17, 616127
Tags
Red Red List (low evidence)
CYP2U1
4 reviews
1 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Autosomal recessive spastic paraplegia 56 (#615030) complex form of disorder, ataxia not yet identified in affected patients.
  • Spastic paraplegia 56, autosomal recessive
Tags
Red Red List (low evidence)
DAB1
3 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 37 615945
Tags
  • currently-ngs-unreportable
  • founder-effect
  • nucleotide-repeat-expansion
Red Red List (low evidence)
DAO
4 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis, MONDO:0004976
Tags
  • refuted
Red Red List (low evidence)
DARS
6 reviews
1 green 4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Brain stem and spinal cord Hypomyelination
  • leg spasticity
  • Hypomyelination with brainstem and spinal cord involvement and leg spasticity, 615281
Tags
  • new-gene-name
Red Red List (low evidence)
DCAF17
4 reviews
1 green 3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Woodhouse-Sakati syndrome
Tags
Red Red List (low evidence)
DDC
3 reviews
1 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Aromatic L-amino acid decarboxylase deficiency, OMIM:608643
  • Aromatic L-amino acid decarboxylase deficiency, MONDO:0012084
Tags
Red Red List (low evidence)
DDHD1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 28, autosomal recessive
Tags
Red Red List (low evidence)
DDHD2
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Autosomal recessive paraplegia 54 (#615033). Complex form of disease ataxia reported amongst the phenotypic features in Citterio et al. (2014), Journal of Neurology, 261, pp.373-381 and Doi et al. (2014), Scientific Reports, 4, 7132.
  • Spastic paraplegia 54, autosomal recessive
Tags
Red Red List (low evidence)
DLAT
3 reviews
1 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
DMXL2
5 reviews
5 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Sensorineural Hearing Loss
  • ORPHA90636
  • OMIM:612186
Tags
Red Red List (low evidence)
DNAJC19
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • 3-methylglutaconic aciduria, type V 610198
  • dilated cardiomyopathy with ataxia (DCMA) syndrome
Tags
Red Red List (low evidence)
DRD2
3 reviews
2 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia, myoclonic, 159900
Tags
Red Red List (low evidence)
DRD5
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • {Blepharospasm, primary benign}, 606798
Tags
Red Red List (low evidence)
DSTYK
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 23, 270750
Tags
  • founder-effect
Red Red List (low evidence)
DYNC1H1
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Charcot Marie Tooth, SMA, Intellectual disability
Tags
Red Red List (low evidence)
EARS2
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
ELOVL5
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 36 (#615957)
Tags
Red Red List (low evidence)
ENTPD1
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 64, autosomal recessive, OMIM:615683
Tags
Red Red List (low evidence)
ERCC6
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
ERLIN1
4 reviews
3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Hereditary spastic paraplegia
  • Spastic paraplegia 62, 615681
Tags
Red Red List (low evidence)
ERLIN2
4 reviews
3 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • neurodegeneration
  • hereditary spastic paraplegia
  • Spastic paraplegia 18, autosomal recessive, 611225
  • Spastic paraplegia, autosomal dominant
Tags
Red Red List (low evidence)
EXOSC3
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Pontocerebellar hypoplasia, type 1B, OMIM:614678
Tags
Red Red List (low evidence)
FA2H
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • fatty acid hydroxylase-associated neurodegeneration
  • Spastic paraplegia 35, autosomal recessive
Tags
Red Red List (low evidence)
FARS2
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 77, autosomal recessive, 617046
Tags
Red Red List (low evidence)
FASTKD2
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Combined oxidative phosphorylation deficiency 44, OMIM:618855
Tags
Red Red List (low evidence)
FGF14
4 reviews
1 green 2 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 27
Tags
Red Red List (low evidence)
FIG4
7 reviews
3 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis 11 OMIM:612577
  • amyotrophic lateral sclerosis type 11 MONDO:0012945
  • Charcot-Marie-Tooth disease, type 4J, OMIM:611228
  • Charcot-Marie-Tooth disease type 4J MONDO:0012640
Tags
Red Red List (low evidence)
FLVCR1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Posterior Column Ataxia with Retinitis Pigmentosa
  • Ataxia, posterior column, with retinitis pigmentosa,
Tags
Red Red List (low evidence)
FMR1
4 reviews
1 green 2 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Fragile X syndrome, OMIM:300624
  • Fragile X tremor/ataxia syndrome, OMIM:300623
Tags
  • nucleotide-repeat-expansion
Red Red List (low evidence)
FOLR1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Neurodegeneration due to cerebral folate transport deficiency, 613068
Tags
Red Red List (low evidence)
FOXG1
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
FOXRED1
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
FXN
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Friedreich ataxia, OMIM:229300
  • Friedreich ataxia with retained reflexes, OMIM:229300
Tags
  • nucleotide-repeat-expansion
Red Red List (low evidence)
GAD1
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Cerebralpalsy,spasticquadriplegic,1,603513
Tags
Red Red List (low evidence)
GAMT
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
GBA2
4 reviews
2 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 46, autosomal recessive, 614409
Tags
Red Red List (low evidence)
GJC2
4 reviews
3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukodystrophy, hypomyelinating, 2
  • Autosomal Recessive Ataxia
  • Spastic paraplegia 44, autosomal recessive
Tags
Red Red List (low evidence)
GLRA1
4 reviews
4 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Hyperekplexia, hereditary 1, 149400
Tags
Red Red List (low evidence)
GLRB
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Hyperekplexia 2, 614619
Tags
Red Red List (low evidence)
GNAL
5 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • adult-onset cranio-cervical dystonia
  • Dystonia 25, 615073
Tags
  • watchlist
Red Red List (low evidence)
GNAO1
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Neurodevelopmental disorder with involuntary movements, 617493
Tags
  • mosaicism
Red Red List (low evidence)
GOSR2
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Epilepsy, progressive myoclonic 6, 614018
Tags
Red Red List (low evidence)
GPAA1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Glycosylphosphatidylinositol biosynthesis defect 15, 617810
Tags
Red Red List (low evidence)
GRID2
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia, autosomal recessive 18, 616204
Tags
Red Red List (low evidence)
GRM1
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 44, OMIM:617691
Tags
Red Red List (low evidence)
HACE1
5 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia
  • psychomotor retardation
  • seizure
  • Spastic paraplegia and psychomotor retardation with or without seizures, 616756
Tags
Red Red List (low evidence)
HFE
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Tags
Red Red List (low evidence)
HPCA
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia 2, torsion, autosomal recessive, 224500
  • generalized dystonia with additional neurological features
  • adolescence-onset segmental dystonia
  • childhood-onset generalized dystonia
Tags
Red Red List (low evidence)
HPRT1
2 reviews
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Lesch-Nyhan syndrome, OMIM:300322
Tags
Red Red List (low evidence)
HSPD1
4 reviews
3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 13, autosomal dominant, OMIM:605280
Tags
Red Red List (low evidence)
HTRA2
4 reviews
2 green 2 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Parkinson Disease, Dominant
  • Parkinson disease 13, 610297
  • 3-methylglutaconic aciduria, type VIII 617248
Tags
Red Red List (low evidence)
HTT
3 reviews
1 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Huntington disease, OMIM:143100
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
IBA57
5 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • ?Spastic paraplegia 74, autosomal recessive, OMIM:616451
Tags
Red Red List (low evidence)
IPPK
3 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Early Onset Complex Disease
Tags
Red Red List (low evidence)
ITPR1
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 29
  • Spinocerebellar ataxia 15
Tags
Red Red List (low evidence)
JPH3
3 reviews
1 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Huntington disease-like 2, OMIM:606438
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
KCNA1
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • myokymia with periodic ataxia
  • Episodic ataxia/myokymia syndrome,
  • EPISODIC ATAXIA, TYPE 1
Tags
  • treatable
Red Red List (low evidence)
KCNJ10
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Seizures, Sensorineural Deafness, Ataxia, Mental Retardation, and Electrolyte Imbalance Syndrome
Tags
Red Red List (low evidence)
KCNK18
5 reviews
4 red
Unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • MIGRAINE, WITH OR WITHOUT AURA, SUSCEPTIBILITY TO, 13
Tags
Red Red List (low evidence)
KCNQ2
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Myokymia, 121200
Tags
Red Red List (low evidence)
KCNQ3
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Seizures, benign neonatal, type 2, 121201
Tags
Red Red List (low evidence)
KDM5C
6 reviews
4 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Intellectual developmental disorder, X-linked syndromic, Claes-Jensen type, OMIM:300534
Tags
Red Red List (low evidence)
KIDINS220
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia, intellectual disability, nystagmus, and obesity, OMIM:617296
Tags
Red Red List (low evidence)
KIF1A
4 reviews
1 green 3 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 30, autosomal dominant, OMIM:610357
  • Spastic paraplegia 30, autosomal recessive, OMIM:610357
  • NESCAV syndrome, OMIM:614255
Tags
Red Red List (low evidence)
KIF1C
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic ataxia 2, autosomal recessive, OMIM:611302
Tags
Red Red List (low evidence)
KLC4
3 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • spastic paraplegia
  • progressive complicated spastic paraplegia
Tags
Red Red List (low evidence)
KMT2B
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia 28, childhood-onset, OMIM:617284
  • early-onset dystonia
Tags
  • treatable
Red Red List (low evidence)
L1CAM
4 reviews
4 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • X-linked hydrocephalus, MASA syndrome, Hereditary spastic paraplegia
Tags
Red Red List (low evidence)
L2HGDH
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
MAG
5 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 75, autosomal recessive, OMIM:616680
Tags
Red Red List (low evidence)
MARS
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Tags
  • new-gene-name
Red Red List (low evidence)
MAT1A
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
MCOLN1
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
MECR
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities 617282
Tags
Red Red List (low evidence)
MMACHC
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ataxia and hypogonadism
  • Methylmalonic aciduria and homocystinuria, cblC type, 277400
Tags
Red Red List (low evidence)
MMADHC
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
MPV17
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
MR1
3 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • NHS GMS
  • South West GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Paroxysmal/Episodic dystonia
Tags
Red Red List (low evidence)
MRE11
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ataxia-telangiectasia-like disorder
  • Ataxia-Telangiectasia-Like Disorder
Tags
Red Red List (low evidence)
MT-ATP6
4 reviews
4 red
MITOCHONDRIAL
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Neuropathy, Ataxia, and Retinitis Pigmentosa
Tags
Red Red List (low evidence)
MT-ND6
2 reviews
1 red
MITOCHONDRIAL
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Leber Optic Atrophy And Dystonia
Tags
Red Red List (low evidence)
MTPAP
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Ataxia, spastic, 4,
  • Ataxia, spastic, 4
  • Spastic ataxia 4, autosomal recessive
Tags
Red Red List (low evidence)
MTTP
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Abetalipoproteinemia, 200100
Tags
Red Red List (low evidence)
MVK
5 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Mevalonic aciduria, OMIM:610377
Tags
Red Red List (low evidence)
NAGLU
2 reviews
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Sensory neuropathy turning into a mild sensory ataxia (AD). Also Sanfilippo syndrome B (AR) (OMIM #252920)
Tags
Red Red List (low evidence)
NDUFA12
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Mitochondrial complex I deficiency, nuclear type 23, OMIM:618244
Tags
Red Red List (low evidence)
NEFH
5 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • susceptibility to amyotrophic lateral sclerosis (ALS)
Tags
Red Red List (low evidence)
NIPA1
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 6, autosomal dominant
  • Spasticparaplegia6,autosomaldominant,600363
Tags
Red Red List (low evidence)
NKX2-1
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Chorea, hereditary benign 118700
  • Choreoathetosis, hypothyroidism, and neonatal respiratory distress 610978
Tags
Red Red List (low evidence)
NKX6-2
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy 617560
Tags
Red Red List (low evidence)
NOP56
2 reviews
1 red
Other - please specifiy in evaluation comments
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 36, OMIM:614153
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
NT5C2
3 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 45, autosomal recessive, 613162
Tags
Red Red List (low evidence)
OPA3
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Costeff syndrome
  • 3-methylglutaconic aciduria, type III, 258501
Tags
Red Red List (low evidence)
OPHN1
4 reviews
4 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Mental retardation, X-linked, with cerebellar hypoplasia and distinctive facial appearance, 300486
Tags
Red Red List (low evidence)
PAX2
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Ataxia,spastic2,autosomalrecessive(2)
Tags
Red Red List (low evidence)
PAX6
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Aniridia, Cerebellar Ataxia, And Mental Retardation
Tags
Red Red List (low evidence)
PCDH12
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • microcephaly
  • intellectual disability
  • perithalamic hyperechogenicity
  • hypothalamic abnormalities
  • periventricular hyperechogenicity
  • epilepsy
  • midbrain abnormalities
Tags
  • founder-effect
Red Red List (low evidence)
PCLO
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Pontocerebellar hypoplasia 3 homozygous non-sense variant identified in the affected individuals of a single pedigree.
Tags
Red Red List (low evidence)
PDHX
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
PDYN
4 reviews
2 green 2 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 23
Tags
Red Red List (low evidence)
PEX16
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Zellweger syndrome (614876)
  • Peroxisome biogenesis disorder 8B (#614877) infantile progressive ataxia and spastic paresis
Tags
Red Red List (low evidence)
PGAP1
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Tags
Red Red List (low evidence)
PIK3R5
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Ataxia-oculomotor apraxia 3
Tags
Red Red List (low evidence)
PLP1
4 reviews
4 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Spastic paraplegia 2, X-linked
Tags
Red Red List (low evidence)
PMPCA
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Non-progressive cerebellar ataxia recessive variants identified in 17 patients from four different families.
Tags
Red Red List (low evidence)
PNKD
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Familial Paroxysmal Nonkinesigenic Dyskinesia
  • PAROXYSMAL NONKINESIGENIC DYSKINESIA 1
  • Paroxysmal nonkinesigenic dyskinesia, 118800
Tags
Red Red List (low evidence)
PNKP
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ataxia with oculomotor apraxia 4 (#616267)
Tags
Red Red List (low evidence)
PNPLA6
4 reviews
2 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia, hypogonadotropic hypogonadism and chorioretinal dystrophy (Boucher-Neuhauser syndrome, #215470)
  • Spastic paraplegia 39, autosomal recessive
  • Oliver-McFarlane syndrome (#603197)
  • Autosomal recessive spastic paraplegia 39 (#612020), ataxia seen in some patients
Tags
Red Red List (low evidence)
PNPT1
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
POLG
4 reviews
1 green 3 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Mitochondrial recessive ataxia syndrome (includes SANDO and SCAE)
Tags
Red Red List (low evidence)
POLR3A
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism
  • Autosomal Recessive Ataxia
Tags
Red Red List (low evidence)
PPP2R2B
3 reviews
1 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 12, OMIM:604326
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
PRICKLE1
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Epilepsy, progressive myoclonic 1B, OMIM:612437
Tags
Red Red List (low evidence)
PRKCG
4 reviews
2 green 2 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 14
Tags
Red Red List (low evidence)
PRRT2
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • dystonia and occasionally hemiplegic migraine and epilepsy
  • episodic kinesigenic dyskinesia
  • EPISODIC KINESIGENIC DYSKINESIA 1
  • CONVULSIONS, FAMILIAL INFANTILE, WITH PAROXYSMAL CHOREOATHETOSIS
  • Paroxysmal kinesigenic choreoathetosis (PKD1) and infantile convulsions
  • SEIZURES, BENIGN FAMILIAL INFANTILE, 2
  • Episodic kinesigenic dyskinesia 1, 128200
Tags
  • treatable
Red Red List (low evidence)
PTEN
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
PTS
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
QDPR
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
RAB39B
4 reviews
1 green 2 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • early-onset parkinsonism and intellectual disability
  • Waisman syndrome, OMIM:311510
Tags
Red Red List (low evidence)
RAB3GAP2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
Phenotypes
  • Martsolf syndrome 1, OMIM:212720
Tags
Red Red List (low evidence)
RARS2
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • epilepsy
  • Pontocerebellar hypoplasia
Tags
Red Red List (low evidence)
REEP1
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 31, autosomal dominant
Tags
Red Red List (low evidence)
REEP2
5 reviews
4 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • ?Spastic paraplegia 72, autosomal recessive, 615625
  • ?Spastic paraplegia 72, autosomal dominant,615625
Tags
Red Red List (low evidence)
RELN
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Tags
Red Red List (low evidence)
RNASEH2A
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
RNASEH2B
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Aicardi-Goutieres syndrome 2, OMIM:610181
  • Dystonia (onset in infancy)
Tags
Red Red List (low evidence)
RNASEH2C
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
RNF170
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ataxia, sensory, 1, autosomal dominant
Tags
Red Red List (low evidence)
RTN2
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 12, autosomal dominant
Tags
Red Red List (low evidence)
RUBCN
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Tags
Red Red List (low evidence)
SACS
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic ataxia, Charlevoix-Saguenay type
Tags
Red Red List (low evidence)
SAMHD1
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
SAR1B
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Chylomicron retention disease 246700
Tags
  • treatable
Red Red List (low evidence)
SCN1A
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • several epilepsy, convulsion and migraine disorders.
  • familial hemiplegic migraine 3
  • Dravet syndrome
Tags
Red Red List (low evidence)
SCN8A
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • epilepsy
  • Cognitive impairment with or without cerebellar ataxia, 614306
  • paroxysmal kinesigenic dyskinesias
Tags
Red Red List (low evidence)
SCN9A
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Erythermalgia, primary, 133020
  • Epilepsy, generalized, with febrile seizures plus, type 7, 613863
  • Congenital Indifference to Pain
  • Paroxysmal Extreme Pain Disorder
  • Dysosteosclerosis
  • Insensitivity to pain, channelopathy-associated, 243000
  • Hereditary Sensory Neuropathy
  • Paroxysmal extreme pain disorder, 167400
  • Febrile seizures, familial, 3B, 613863
  • Erythermalgia, Primary
Tags
Red Red List (low evidence)
SCP2
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Leukoencephalopathy with dystonia and motor neuropathy, 613724
Tags
Red Red List (low evidence)
SDHAF1
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
SEPSECS
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Pontocerebellar hypoplasia type 2D (613811)
Tags
Red Red List (low evidence)
SERAC1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome, OMIM:614739
Tags
Red Red List (low evidence)
SGCE
4 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, maternally imprinted (paternal allele expressed)
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Myoclonus dystonia syndrome
  • Myoclonus-Dystonia
  • maternally imprinted Dystonia-11, myoclonic, 159900
Tags
Red Red List (low evidence)
SIL1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Marinesco-Sjogren syndrome, 248800
Tags
Red Red List (low evidence)
SLC16A2
4 reviews
4 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Allan-Herndon-Dudley syndrome, OMIM:300523
Tags
Red Red List (low evidence)
SLC19A3
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
SLC1A3
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • EPISODIC ATAXIA, TYPE 6
  • Episodic ataxia, type 6,
Tags
Red Red List (low evidence)
SLC1A4
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic tetraplegia, thin corpus callosum, and progressive microcephaly, 616657
Tags
Red Red List (low evidence)
SLC25A46
4 reviews
3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Neuropathy, hereditary motor and sensory, type VIB 616505
Tags
Red Red List (low evidence)
SLC2A1
4 reviews
4 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • GLUT1 DEFICIENCY SYNDROME 1
  • dystonia 9
  • GLUT1 deficiency syndrome 1, infantile onset, severe
  • EPILEPSY, IDIOPATHIC GENERALIZED
  • Dystonia
  • GLUT1 deficiency syndrome 2, childhood onset
  • GLUT1 deficiency syndrome 1, 606777
  • paroxysmal exertion-induced dyskinesia with or without epilepsy and/or hemolytic anemia
  • GLUT1 deficiency syndrome 1
  • GLUT1 deficiency syndrome 2
  • spastic paraplegia
Tags
Red Red List (low evidence)
SLC33A1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
Phenotypes
  • Spastic paraplegia 42, autosomal dominant,
Tags
Red Red List (low evidence)
SLC39A14
4 reviews
1 green 3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Hypermanganesemia with dystonia 2 617013
Tags
Red Red List (low evidence)
SLC41A1
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Parkinson disease (Yan (2011) Int J Neurosci 121,632)
Tags
Red Red List (low evidence)
SLC46A1
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
SLC52A1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
Phenotypes
  • Riboflavin deficiency (condition resembling childhood-onset motor neurone disease)
Tags
Red Red List (low evidence)
SLC52A2
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Brown-Vialetto-Van Laere syndrome 2
Tags
  • treatable
Red Red List (low evidence)
SLC52A3
5 reviews
3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Fazio-Londe disease
  • Brown-Vialetto-Van Laere syndrome 1
Tags
Red Red List (low evidence)
SLC6A3
4 reviews
2 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Parkinsonism-dystonia, infantile, 613135
  • {Nicotine dependence, protection against}, 188890
Tags
Red Red List (low evidence)
SLC6A5
4 reviews
4 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Hyperekplexia 3, 614618
Tags
Red Red List (low evidence)
SLC9A6
4 reviews
4 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Mental retardation, X-linked syndromic, Christianson type, 300243
Tags
Red Red List (low evidence)
SNCAIP
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Parkinson Disease, Dominant/Recessive
Tags
Red Red List (low evidence)
SNX14
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Autosomal recessive spinocerebellar ataxia (#616354)
Tags
Red Red List (low evidence)
SPART
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Troyer syndrome, OMIM:275900
Tags
Red Red List (low evidence)
SPR
4 reviews
4 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • paediatric form of dopa responsive dystonia
  • Dystonia, dopa-responsive, due to sepiapterin reductase deficiency, 612716
  • Dystonia, dopa-responsive, due to sepiapterin reductase deficiency 612716
  • Dopa-Responsive Dystonia
Tags
  • treatable
Red Red List (low evidence)
SPTBN2
4 reviews
1 green 3 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 5, OMIM:600224
  • Spinocerebellar ataxia, autosomal recessive 14, OMIM:615386
Tags
Red Red List (low evidence)
SRD5A3
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Congenital disorder of glycosylation, type Iq, 612379
  • Kahrizi syndrome, 612713
Tags
Red Red List (low evidence)
SUCLA2
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
SUOX
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
SYNE1
4 reviews
2 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Cerebellar Ataxia
  • Spinocerebellar ataxia, autosomal recessive 8
Tags
Red Red List (low evidence)
SYT14
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Spinocerebellarataxia,autosomalrecessive11,614229
Tags
Red Red List (low evidence)
TAF15
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Amyotrophic lateral sclerosis
Tags
Red Red List (low evidence)
TBP
3 reviews
1 red
Other
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 17, OMIM:607136
  • {Parkinson disease, susceptibility to}, OMIM:168600
Tags
  • currently-ngs-unreportable
  • nucleotide-repeat-expansion
Red Red List (low evidence)
TDP1
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Spinocerebellar ataxia, autosomal recessive with axonal neuropathy
Tags
Red Red List (low evidence)
TECPR2
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Spastic paraplegia 49, autosomal recessive, 615031
Tags
Red Red List (low evidence)
TET2
1 review
Unknown
Sources
  • Literature
Tags
Red Red List (low evidence)
TFG
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Spastic paraplegia 57, autosomal recessive, OMIM:615658
Tags
Red Red List (low evidence)
TGM6
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 35, 613908
Tags
Red Red List (low evidence)
TH
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Segawa syndrome
  • DOPA-responsive dystonia
  • infantile parkinsonism
  • Segawa syndrome, recessive, 605407
  • paediatric form of dopa responsive dystonia
Tags
  • treatable
Red Red List (low evidence)
THAP1
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia
  • Dystonia 6, torsion, 602629
  • DYT6
Tags
Red Red List (low evidence)
TIA1
2 reviews
1 red
Not set
Sources
  • London North GLH
  • NHS GMS
Tags
Red Red List (low evidence)
TIMM8A
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Deafness-Dystonia-Optic Neuronopathy Syndrome
Tags
Red Red List (low evidence)
TOR1A
4 reviews
3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Dystonia-1, torsion, OMIM:128100
  • Dystonic disorder, MONDO:0003441
Tags
Red Red List (low evidence)
TPK1
0 reviews
Unknown
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
Tags
Red Red List (low evidence)
TPP1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ceroid lipofuscinosis, neuronal, 2, 204500
  • Spinocerebellar ataxia, autosomal recessive 7, 609270
Tags
Red Red List (low evidence)
TSEN2
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Pontocerebellar hypoplasia 2B, 612389
Tags
Red Red List (low evidence)
TSEN34
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Pontocerebellar hypoplasia 2C (612390)
Tags
Red Red List (low evidence)
TSEN54
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Pontocerebellar hypoplasia 2A, 277470
  • Pontocerebellar hypoplasia 4, 225753
Tags
Red Red List (low evidence)
TTBK2
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia 11
Tags
Red Red List (low evidence)
TTPA
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Ataxia with isolated vitamin E deficiency
  • Ataxia with Vitamin E Deficiency
Tags
Red Red List (low evidence)
TWNK
4 reviews
1 green 3 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar Ataxia, Recessive
  • Ataxia Neuropathy Spectrum Disorders, Dominant
  • Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 3, 609286
  • Perrault syndrome 5, 616138
  • Mitochondrial DNA depletion syndrome 7 (hepatocerebral type), 271245
Tags
Red Red List (low evidence)
UBR4
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
Phenotypes
  • Episodic ataxia
Tags
Red Red List (low evidence)
UCHL1
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • {?Parkinson disease 5, susceptibility to}, OMIM:613643
  • Parkinson disease 5, autosomal dominant, susceptibility to, MONDO:0013340
  • Spastic paraplegia 79B, autosomal recessive, OMIM:615491
  • early-onset progressive neurodegeneration-blindness-ataxia-spasticity syndrome, MONDO:0014209
  • Spastic paraplegia 79A, autosomal dominant, OMIM:620221
Tags
Red Red List (low evidence)
UNC13A
0 reviews
Unknown
Sources
  • Expert Review Red
Tags
Red Red List (low evidence)
USP8
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Tags
Red Red List (low evidence)
VAC14
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Striatonigral degeneration, childhood-onset 617054
Tags
Red Red List (low evidence)
VAMP1
5 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • South West GLH
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic ataxia 1, autosomal dominant, 108600
Tags
  • founder-effect
  • watchlist
Red Red List (low evidence)
VEGFA
0 reviews
Unknown
Sources
  • Expert Review Red
Tags
Red Red List (low evidence)
VLDLR
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Cerebellar hypoplasia and mental retardation with or without quadrupedal locomotion 1, 224050
Tags
Red Red List (low evidence)
VPS13D
4 reviews
1 green 3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spinocerebellar ataxia, autosomal recessive 4, 607317
Tags
Red Red List (low evidence)
VPS37A
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Dystonia
  • Spastic paraplegia 53, autosomal recessive
Tags
Red Red List (low evidence)
VPS53
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • Yorkshire and North East GLH
Phenotypes
  • Pontocerebellar hypoplasia 2E (#615851)
Tags
Red Red List (low evidence)
WASHC5
4 reviews
1 green 3 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 8, autosomal dominant
Tags
Red Red List (low evidence)
WDR45B
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Neurodevelopmental disorder with spastic quadriplegia and brain abnormalities with or without seizures, OMIM:617977
Tags
Red Red List (low evidence)
WDR48
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Tags
Red Red List (low evidence)
WDR73
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Galloway Mowat syndrome, when patients are ambulant ataxia is a recognised feature
  • Galloway-Mowat syndrome 1, 251300
Tags
Red Red List (low evidence)
WDR81
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Cerebellar ataxia, mental retardation, and dysequilibrium syndrome 2, 610185
Tags
Red Red List (low evidence)
WFS1
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Wolfram syndrome 1, 222300
Tags
Red Red List (low evidence)
WWOX
4 reviews
4 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Autosomal recessive spinocerebellar ataxia 12, 614322
Tags
Red Red List (low evidence)
XRCC1
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Spinocerebellar ataxia, autosomal recessive 26, OMIM:617633
Tags
Red Red List (low evidence)
YY1
4 reviews
4 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Gabriele-de Vries syndrome 617557
Tags
Red Red List (low evidence)
ZEB2
0 reviews
Unknown
Sources
  • Expert Review Red
Tags
Red Red List (low evidence)
ZFYVE26
4 reviews
3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • London North GLH
  • NHS GMS
  • Wessex and West Midlands GLH
  • Yorkshire and North East GLH
Phenotypes
  • Spastic paraplegia 15, autosomal recessive
  • Autosomal recessive spastic paraplegia 15 (#270700) complex form of the disease including ataxia. Pyle et al. (2015), Brain, 138, pp.276-283. Implicated in undiagnosed ataxia.
Tags
Red Red List (low evidence)
ZFYVE27
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
Phenotypes
  • Spastic paraplegia 33, autosomal dominant
Tags
Red Red List (low evidence)
ZNF592
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Spinocerebellar ataxia, autosomal recessive 5
Tags
No list No list
15q11q13 recurrent (PWS/AS) region (BP1-BP3, Class 1) Loss
ISCA-37404-Loss
Region
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Removed
  • London North GLH
  • NHS GMS
Phenotypes
  • 105831
  • Angelman syndrome
  • Developmental delay, muscle weakness
  • Mental retardation
  • 176270
  • microcephaly
  • Prader-Willi syndrome
Tags
  • curated_removed
No list No list
Xp11.23 region (includes MAOA and MAOB) Loss
ISCA-37468-Loss
Region
2 reviews
1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Removed
  • NHS GMS
Phenotypes
  • hypotonia
  • episodes of sudden loss of muscle tone
  • short stature
  • severe intellectual disability
  • autistic features
  • eleveated serotonin levels
  • exiting behavior
  • lip-smacking
  • stereotypical hand movements
Tags
  • curated_removed
No list No list
15q11q13 recurrent (PWS/AS) region (BP2-BP3, Class 2) Gain
ISCA-37478-Gain
Region
3 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Removed
  • London North GLH
  • NHS GMS
Phenotypes
  • autism, mental retardation, ataxia, seizures, developmental delays, and behavioral problems
  • hypotonia and motor delays, intellectual disability, autism spectrum disorder (ASD), and epilepsy including infantile spasms, 608636
  • chromosome 15q11-q13 duplication syndrome
Tags
  • curated_removed
No list No list
15q11q13 recurrent (PWS/AS) region (BP2-BP3, Class 2) Loss
ISCA-37478-Loss
Region
3 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Removed
  • London North GLH
  • NHS GMS
Phenotypes
  • 105830
  • Angelman syndrome
  • Developmental delay, muscle weakness
  • Mental retardation
  • 176270
  • microcephaly
  • Prader-Willi syndrome
Tags
  • curated_removed
No list No list
SPTLC1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • NHS GMS
Phenotypes
  • Juvenile ALS
Tags

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