- ABCD1 5
- AFG3L2 4
- ALS2 4
- ANG 4
- ANXA11 4
- APP 5
- ARSA 4
- ATP13A2 5
- ATP1A3 5
- ATP7B 4
- AUH 3
- C19orf12 7
- CACNA1G 4
- CCNF 3
- CHCHD10 5
- CHCHD2 5
- CHMP2B 5
- CLCN2 5
- CLN6 4
- COASY 4
- COL4A1 3
- COL4A2 3
- CP 4
- CSF1R 5
- CTSA 4
- CTSF 2
- CYP27A1 4
- CYP7B1 4
- DARS2 4
- DCTN1 4
- DNAJB2 2
- DNAJC5 4
- DNAJC6 4
- DNAJC7 6
- DNMT1 5
- EIF2B1 4
- EIF2B2 4
- EIF2B3 4
- EIF2B4 4
- EIF2B5 4
- ELOVL4 4
- EPM2A 4
- ERBB4 4
- FBXO7 4
- FTL 4
- FUS 4
- GBA 7
- GBE1 2
- GCH1 6
- GFAP 4
- GLA 3
- GRN 7
- GSN 3
- HEXA 4
- HEXB 4
- HNRNPA1 4
- HTRA1 3
- ITM2B 4
- KCNC3 4
- KCND3 4
- KIAA1161 3
- KIF5A 4
- LAMB1 3
- LRRK2 4
- LYST 4
- MAPT 5
- NAA60 1
- NEK1 4
- NHLRC1 4
- NOTCH3 5
- NPC1 4
- NPC2 4
- OPTN 4
- PANK2 4
- PARK7 4
- PDGFB 3
- PDGFRB 3
- PFN1 4
- PINK1 4
- PLA2G6 5
- POLG 6
- PRKN 4
- PRNP 4
- PSAP 2
- PSEN1 5
- PSEN2 4
- RAB32 3
- RNF216 4
- SETX 4
- SLC20A2 3
- SNCA 4
- SOD1 7
- SPAST 4
- SPG11 5
- SPG21 6
- SPG7 8
- SPTLC1 3
- SPTLC2 2
- SQSTM1 3
- SS18L1 5
- STUB1 8
- SYNJ1 4
- TARDBP 4
- TBK1 4
- TMEM240 4
- TREM2 3
- TREX1 3
- TTC19 4
- TTR 3
- TUBA4A 4
- TYROBP 4
- UBQLN2 4
- VAPB 4
- VCP 4
- VPS13A 4
- VPS35 4
- VRK1 7
- WDR45 4
- XK 3
- XPR1 3
- AP5Z1 3
- ARHGEF28 2
- ATP2B3 3
- ATP6AP2 3
- CCDC88C 3
- CIZ1 5
- COQ2 2
- CST3 3
- DNAJC13 2
- EIF4G1 2
- EWSR1 2
- GCDH 2
- GIGYF2 2
- GLT8D1 3
- HNRNPA2B1 2
- JAM2 2
- MARS2 4
- MATR3 2
- NR4A2 2
- PRKRA 5
- PRPH 2
- SIGMAR1 5
- SLC30A10 5
- SNCB 3
- SORL1 2
- TAF1 4
- TUBB4A 5
- UQCRC1 2
- VPS13C 2
- AAAS 4
- AARS 3
- ABCB7 4
- ABHD12 4
- ACTB 3
- ADAR 4
- ADCY5 4
- AIMP1 4
- ALAS2 3
- ALDH18A1 4
- AMPD2 4
- ANO10 4
- ANO3 4
- AP1S2 4
- AP4B1 4
- AP4E1 4
- AP4M1 4
- AP4S1 4
- APTX 4
- AR 4
- ARG1 5
- ARL6IP1 3
- ARSI 3
- ARX 3
- ATCAY 4
- ATL1 4
- ATM 4
- ATN1 4
- ATP1A2 4
- ATP8A2 3
- ATXN1 4
- ATXN10 4
- ATXN2 4
- ATXN3 4
- ATXN7 5
- ATXN8 4
- B4GALNT1 4
- BCAP31 3
- BEAN1 2
- BSCL2 4
- C12orf65 5
- C9orf72 4
- CA8 4
- CACNA1A 5
- CACNB4 4
- CAMTA1 4
- CAPN1 4
- CASK 4
- CCT5 3
- CDK16 5
- CHMP1A 4
- CLP1 3
- COG5 6
- COQ8A 4
- COX20 4
- CSTB 4
- CWF19L1 4
- CYP2U1 4
- DAB1 3
- DAO 4
- DARS 6
- DCAF17 4
- DDC 3
- DDHD1 4
- DDHD2 4
- DLAT 3
- DMXL2 5
- DNAJC19 4
- DRD2 3
- DRD5 2
- DSTYK 2
- DYNC1H1 3
- EARS2 2
- ELOVL5 2
- ENTPD1 2
- ERCC6 2
- ERLIN1 4
- ERLIN2 4
- EXOSC3 4
- FA2H 4
- FARS2 4
- FASTKD2 2
- FGF14 4
- FIG4 8
- FLVCR1 4
- FMR1 4
- FOLR1 4
- FOXG1 2
- FOXRED1 2
- FXN 4
- GAD1 2
- GAMT 2
- GBA2 4
- GJC2 4
- GLRA1 4
- GLRB 4
- GNAL 5
- GNAO1 4
- GOSR2 4
- GPAA1 4
- GRID2 4
- GRM1 4
- HACE1 5
- HFE 2
- HPCA 4
- HPRT1 2
- HSPD1 4
- HTRA2 4
- HTT 3
- IBA57 5
- IPPK 3
- ITPR1 4
- JPH3 3
- KCNA1 4
- KCNJ10 4
- KCNK18 5
- KCNQ2 4
- KCNQ3 4
- KDM5C 6
- KIDINS220 4
- KIF1A 4
- KIF1C 4
- KLC4 3
- KMT2B 4
- L1CAM 4
- L2HGDH 2
- MAG 5
- MARS 2
- MAT1A 2
- MCOLN1 2
- MECR 4
- MMACHC 4
- MMADHC 2
- MPV17 2
- MR1 3
- MRE11 4
- MT-ATP6 4
- MT-ND6 2
- MTPAP 2
- MTTP 4
- MVK 5
- NAGLU 2
- NDUFA12 2
- NEFH 6
- NIPA1 4
- NKX2-1 2
- NKX6-2 4
- NOP56 2
- NT5C2 3
- OPA3 4
- OPHN1 4
- PAX2 0
- PAX6 4
- PCDH12 0
- PCLO 0
- PDHX 0
- PDYN 4
- PEX16 4
- PGAP1 0
- PIK3R5 0
- PLP1 4
- PMPCA 4
- PNKD 4
- PNKP 4
- PNPLA6 4
- PNPT1 0
- POLR3A 4
- PPP2R2B 3
- PRICKLE1 0
- PRKCG 4
- PRRT2 4
- PTEN 0
- PTS 0
- QDPR 0
- RAB39B 4
- RAB3GAP2 1
- RARS2 4
- REEP1 4
- REEP2 5
- RELN 0
- RNASEH2A 0
- RNASEH2B 0
- RNASEH2C 0
- RNF170 4
- RTN2 4
- RUBCN 0
- SACS 4
- SAMHD1 0
- SAR1B 4
- SCN1A 4
- SCN8A 4
- SCN9A 0
- SCP2 0
- SDHAF1 0
- SEPSECS 4
- SERAC1 4
- SGCE 4
- SGIP1 1
- SIL1 4
- SLC16A2 4
- SLC19A3 0
- SLC1A3 4
- SLC1A4 4
- SLC25A46 4
- SLC2A1 4
- SLC33A1 0
- SLC39A14 4
- SLC41A1 0
- SLC46A1 0
- SLC52A1 0
- SLC52A2 4
- SLC52A3 5
- SLC6A3 4
- SLC6A5 4
- SLC9A6 4
- SNCAIP 0
- SNX14 4
- SPART 4
- SPR 5
- SPTBN2 4
- SRD5A3 4
- SUCLA2 0
- SUOX 0
- SYNE1 4
- SYT14 0
- TAF15 2
- TBP 3
- TDP1 0
- TECPR2 0
- TET2 1
- TFG 0
- TGM6 4
- TH 4
- THAP1 4
- TIA1 2
- TIMM8A 0
- TOR1A 4
- TPK1 0
- TPP1 4
- TSEN2 4
- TSEN34 0
- TSEN54 4
- TTBK2 4
- TTPA 4
- TWNK 4
- UBR4 0
- UCHL1 0
- UNC13A 0
- USP8 0
- VAC14 4
- VAMP1 5
- VEGFA 0
- VLDLR 4
- VPS13D 4
- VPS37A 0
- VPS53 2
- WASHC5 4
- WDR45B 4
- WDR48 0
- WDR73 4
- WDR81 4
- WFS1 4
- WWOX 4
- XRCC1 0
- YY1 4
- ZEB2 0
- ZFYVE26 4
- ZFYVE27 0
- ZNF592 0
- ATP7A 1
- HSPB1 1
- HSPB8 1
- IGHMBP2 1
- LRSAM1 1
- MME 1
- MORC2 1
- PLEKHG5 1
- SLC5A7 1
- SORD 1
- SYT2 1
- TRPV4 1
- UBA1 1
-
22q11.2 recurrent (DGS/VCFS) region (proximal, A-D) (includes TBX1) Loss
ISCA-37446-Loss 2 -
15q11q13 recurrent (PWS/AS) region (BP2-BP3, Class 2) Loss
ISCA-37478-Loss 3 -
15q11q13 recurrent (PWS/AS) region (BP1-BP3, Class 1) Loss
ISCA-37404-Loss 2 -
Xp11.23 region (includes MAOA and MAOB) Loss
ISCA-37468-Loss 2 -
15q11q13 recurrent (PWS/AS) region (BP2-BP3, Class 2) Gain
ISCA-37478-Gain 3
Adult onset neurodegenerative disorder
Gene: LRSAM1 No listEnsemblGeneIds (GRCh38): ENSG00000148356
EnsemblGeneIds (GRCh37): ENSG00000148356
OMIM: 610933, Gene2Phenotype
LRSAM1 is in 3 panels
1 review
Oliver Ziff (University College London)
Green List (high evidence)
Causes CMT2P with marked motor features out of proportion to sensory loss, presenting as an PMA mimic. Needs inclusion in R460.1 to avoid R78 reanalysis.
Sources: Literature, Expert ReviewCreated: 22 May 2026, 1:48 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Charcot Marie Toothe disease, axonal, type 2P, 614436
Publications
Mode of pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Variants in this GENE are reported as part of current diagnostic practice
Panel version: 9.1
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Phenotypes
-
- Charcot Marie Toothe disease, axonal, type 2P, 614436
- OMIM
- 610933
- Clinvar variants
- Variants in LRSAM1
- Penetrance
- Complete
- Publications
- Mode of Pathogenicity
- Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
- Panels with this gene
History Filter Activity
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance, Set mode of pathogenicity
Oliver Ziff (University College London)gene: LRSAM1 was added gene: LRSAM1 was added to Adult onset neurodegenerative disorder. Sources: Literature,Expert Review Mode of inheritance for gene: LRSAM1 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: LRSAM1 were set to 22781092; 28335037 Phenotypes for gene: LRSAM1 were set to Charcot Marie Toothe disease, axonal, type 2P, 614436 Penetrance for gene: LRSAM1 were set to Complete Mode of pathogenicity for gene: LRSAM1 was set to Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments Review for gene: LRSAM1 was set to GREEN gene: LRSAM1 was marked as current diagnostic