- Panels
- Retinal disorders
- PGK1
Genes in panel
- ABCA4 5
- ABCC6 3
- ABHD12 3
- ACBD5 5
- ACO2 5
- ADAM9 2
- ADAMTS18 2
- ADGRV1 3
- AFG3L2 4
- AGBL5 3
- AHI1 3
- AHR 6
- AIPL1 6
- AIRE 3
- ALDH3A2 2
- ALMS1 4
- ALPK1 4
- AMACR 2
- AP5M1 3
- AP5Z1 3
- ARHGEF18 2
- ARL13B 5
- ARL2BP 2
- ARL3 1
- ARL6 2
- ARSG 4
- ATF6 3
- ATOH7 2
- BBS1 3
- BBS10 3
- BBS12 2
- BBS2 2
- BBS4 2
- BBS5 2
- BBS7 2
- BBS9 2
- BEST1 3
- C19orf44 3
- C1QTNF5 2
- C21orf2 5
- C2orf71 4
- C8orf37 3
- CABP4 3
- CACNA1F 3
- CACNA2D4 5
- CAPN5 2
- CC2D2A 2
- CDH23 2
- CDH3 2
- CDHR1 3
- CEP164 2
- CEP250 2
- CEP290 4
- CEP78 2
- CERKL 3
- CFAP20 3
- CFH 2
- CHM 2
- CLEC3B 2
- CLN3 3
- CLN5 2
- CLN6 2
- CLN8 2
- CLRN1 2
- CNGA1 5
- CNGA3 3
- CNGB1 3
- CNGB3 3
- CNNM4 2
- COL11A1 4
- COL18A1 3
- COL2A1 6
- COL4A1 2
- COL9A1 4
- COL9A2 4
- COL9A3 2
- COQ2 2
- COQ8B 2
- CRB1 4
- CRX 3
- CSPP1 2
- CTC1 2
- CTNNA1 3
- CTNNB1 2
- CTNND1 2
- CTSD 2
- CWC27 3
- CYP2U1 3
- CYP4V2 3
- DCT 3
- DHDDS 2
- DHX38 5
- DRAM2 3
- DYNC2H1 3
- DYRK1A 3
- EFEMP1 3
- ELOVL4 2
- ERCC6 2
- ERCC8 2
- EYS 3
- FAM161A 3
- FAM57B 4
- FLVCR1 3
- FZD4 2
- GNAT1 2
- GNAT2 2
- GNB3 2
- GNPTG 2
- GPR143 5
- GPR179 3
- GRK1 3
- GRM6 3
- GRN 4
- GUCA1A 3
- GUCA1B 3
- GUCY2D 3
- HCCS 2
- HGSNAT 4
- HK1 4
- HMX1 2
- IDH3A 2
- IDH3B 2
- IDH3G 2
- IFT140 2
- IFT172 2
- IFT27 3
- IFT74 2
- IKBKG 2
- IMPDH1 2
- IMPG1 5
- IMPG2 4
- INPP5E 2
- IQCB1 3
- JAG1 4
- KCNJ13 2
- KCNV2 4
- KIAA1549 7
- KIF11 2
- KIZ 3
- KLHL7 3
- LAMA1 2
- LAMP2 2
- LCA5 3
- LRAT 2
- LRIT3 2
- LRP2 3
- LRP5 3
- LZTFL1 2
- MAK 3
- MAN2B1 3
- MCOLN1 3
- MED12 2
- MERTK 3
- MFRP 3
- MFSD8 3
- MIR204 4
- MKKS 2
- MKS1 2
- MMACHC 2
- MPDZ 3
- MSTO1 3
- MT-ATP6 4
- MT-TL1 4
- MTTP 3
- MVK 8
- MYO7A 3
- NBAS 4
- NDP 2
- NEUROD1 2
- NMNAT1 3
- NPHP1 3
- NPHP3 4
- NPHP4 2
- NR2E3 3
- NRL 2
- NYX 2
- OAT 2
- OFD1 2
- OPN1LW 3
- OPN1MW 2
- OTX2 4
- P3H2 3
- PANK2 2
- PAX2 2
- PCDH15 4
- PCYT1A 5
- PDE6A 2
- PDE6B 3
- PDE6C 3
- PDE6G 2
- PDSS1 2
- PEX1 2
- PEX2 2
- PEX6 4
- PEX7 2
- PHYH 2
- PLA2G5 2
- PLK4 2
- PNPLA6 2
- POC1B 2
- POC5 4
- POMGNT1 3
- POMT1 3
- PPT1 2
- PQLC2 2
- PRCD 2
- PRDM13 2
- PROM1 3
- PRPF3 2
- PRPF31 4
- PRPF4 2
- PRPF6 6
- PRPF8 3
- PRPH2 4
- PRPS1 2
- PYGM 3
- RAB28 2
- RAX2 4
- RBP3 4
- RBP4 3
- RCBTB1 3
- RD3 2
- RDH12 3
- RDH5 7
- REEP6 2
- RGR 5
- RGS9 2
- RHO 3
- RIMS2 2
- RLBP1 6
- RNU4-2 2
- RNU4ATAC 3
- RNU6-1 2
- RNU6-2 2
- RNU6-8 2
- RNU6-9 2
- ROM1 6
- RP1 5
- RP1L1 6
- RP2 3
- RP9 3
- RPE65 4
- RPGR 3
- RPGRIP1 3
- RPGRIP1L 2
- RS1 2
- SAG 5
- SAMD7 4
- SCAPER 2
- SDCCAG8 2
- SGSH 2
- SLC24A1 2
- SLC37A3 6
- SLC38A8 6
- SLC6A6 2
- SNRNP200 3
- SPATA7 3
- SPG11 4
- SRD5A3 2
- SSBP1 4
- STN1 2
- STX3 1
- SUMF1 3
- TBC1D32 2
- THRB 3
- TIMM8A 2
- TIMP3 2
- TINF2 2
- TMEM216 3
- TMEM218 3
- TMEM231 2
- TMEM237 2
- TOPORS 4
- TPP1 2
- TRAF3IP1 2
- TREX1 2
- TRNT1 2
- TRPM1 3
- TSPAN12 3
- TTC21B 5
- TTC8 2
- TTLL5 2
- TUB 3
- TUBB4B 2
- TUBGCP4 2
- TUBGCP6 2
- TULP1 2
- UBAP1L 5
- USH1C 3
- USH1G 2
- USH2A 3
- USP45 3
- VCAN 3
- VPS13B 3
- VSX2 4
- WDPCP 4
- WDR19 2
- WHRN 4
- ZFYVE26 2
- ZNF408 2
- ZNF423 2
- ADIPOR1 1
- AP5B1 2
- ASRGL1 1
- C12orf65 2
- CCT2 1
- CEP19 1
- CLCC1 1
- CLUAP1 1
- COQ5 1
- CYP2R1 2
- DMD 1
- EGFLAM 2
- ELOVL1 1
- ESPN 1
- EXOSC2 1
- FRMD7 5
- FSD1L 2
- GDF6 3
- GPATCH11 1
- IFT81 2
- KIF3B 1
- LIG3 2
- LRRC32 2
- MAPKAPK3 1
- MDM1 2
- MORC2 2
- MT-TH 1
- MT-TP 1
- MT-TS2 1
- OPN1SW 1
- PAK2 1
- PAX6 6
- PDE6H 4
- PGK1 1
- POMGNT2 2
- RDH11 2
- RTN4IP1 1
- SAMD11 1
- SEMA4A 3
- SLC25A46 1
- SPG7 2
- SPP2 1
- SPTLC1 2
- TEAD1 4
- TTPA 1
- UNC119 8
- VWA8 2
- ADGRA3 3
- AMN 2
- AP3B2 2
- ARMS2 2
- ATP13A2 2
- ATXN7 2
- B3GLCT 3
- BBIP1 2
- BCOR 1
- BMP4 1
- C2 1
- C3 1
- C5orf42 2
- CA4 4
- CCZ1B 2
- CEP41 1
- CFB 1
- CFI 2
- CIB2 4
- COL11A2 2
- COQ4 1
- CROCC 2
- CTSF 2
- CUBN 1
- CYP1B1 1
- CYP27A1 1
- DTHD1 3
- EMC1 3
- FAM71A 2
- FBLN5 1
- FOXC1 1
- FOXE3 1
- FOXI2 2
- FRAS1 1
- FREM1 1
- FREM2 1
- FSCN2 3
- FUT5 2
- GNPTAB 1
- GP1BA 1
- GRIP1 1
- HARS 5
- HKDC1 2
- HMCN1 1
- HTRA1 1
- INVS 3
- IRX5 4
- IRX6 2
- ITIH2 2
- ITM2B 3
- KCTD7 1
- KIF7 1
- LRMDA 3
- LRP1 2
- MFN2 1
- MT-ND1 1
- MT-ND4 1
- MT-ND6 2
- MYOC 1
- NAALADL1 2
- NEK2 3
- NR2F1 2
- NUMB 2
- OCA2 3
- OPA1 3
- OPA3 2
- OR2M7 2
- PDAP1 1
- PDZD7 1
- PITPNM3 3
- PITX2 1
- PITX3 1
- PLD4 2
- PODNL1 2
- POMZP3 2
- PRTFDC1 2
- PTBP1 1
- RB1 1
- RGS9BP 1
- RIMS1 3
- SLC24A5 2
- SLC45A2 2
- SLC7A14 1
- SMOC1 1
- SOX2 1
- SPTLC2 2
- STRA6 1
- TCTN1 1
- TCTN2 1
- TCTN3 1
- TEX28 1
- TMEM126A 2
- TMEM67 1
- TRIM32 4
- TYR 2
- TYRP1 2
- VAX1 1
- WASF3 2
- WFS1 1
- WT1 1
- ZNF513 3
- ZPR1 2
- EVR3 3
- INTS11 1
Retinal disorders
Gene: PGK1 Amber List (moderate evidence)
PGK1 (phosphoglycerate kinase 1)
EnsemblGeneIds (GRCh38): ENSG00000102144
EnsemblGeneIds (GRCh37): ENSG00000102144
OMIM: 311800, Gene2Phenotype
PGK1 is in 13 panels
EnsemblGeneIds (GRCh38): ENSG00000102144
EnsemblGeneIds (GRCh37): ENSG00000102144
OMIM: 311800, Gene2Phenotype
PGK1 is in 13 panels
1 review
Ivone Leong (Genomics England Curator)
I don't know
Submitted on behalf of the GMS Eye specialist group. These genes are also from RetNet. There is currently not enough evidence to rate these genes Green, therefore they have been given an Amber rating.Created: 27 Dec 2019, 9:10 a.m. | Last Modified: 27 Dec 2019, 9:10 a.m.
Panel Version: 2.5
Created: 27 Dec 2019, 9:10 a.m.
Last Modified: 27 Dec 2019, 9:10 a.m.
Panel version: 2.5
Last Modified: 27 Dec 2019, 9:10 a.m.
Panel version: 2.5
Details
- Sources
-
- NHS GMS
- RetNet
- Expert Review Amber
- OMIM
- 311800
- Clinvar variants
- Variants in PGK1
- Penetrance
- None
- Panels with this gene
-
- Undiagnosed metabolic disorders
- Fetal anomalies
- Rhabdomyolysis and metabolic muscle disorders
- Likely inborn error of metabolism
- Intellectual disability
- Rare anaemia
- Ketotic hypoglycaemia
- Childhood onset dystonia, chorea or related movement disorder
- Glycogen storage disease
- DDG2P
- Retinal disorders
- Acute rhabdomyolysis
- Limb girdle muscular dystrophies, myofibrillar myopathies and distal myopathies
History Filter Activity
27 Dec 2019, Gel status: 2
Created, Added New Source, Set mode of inheritance
Ivone Leong (Genomics England Curator)gene: PGK1 was added gene: PGK1 was added to Retinal disorders. Sources: Expert Review Amber,RetNet,NHS GMS Mode of inheritance for gene: PGK1 was set to