Skeletal dysplasia
Gene: PIGTEnsemblGeneIds (GRCh38): ENSG00000124155
EnsemblGeneIds (GRCh37): ENSG00000124155
OMIM: 610272, Gene2Phenotype
PIGT is in 10 panels
4 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
Multiple congenital anomalies-hypotonia-seizures syndrome is an autosomal recessive disorder characterized by neonatal hypotonia, lack of psychomotor development, seizures, dysmorphic features, and variable congenital anomalies involving the cardiac, urinary, and gastrointestinal systems - >3 cases. ?SD - green if SD/red if not. Note added by AW: PIGT yes Clear skeletal features, eg Lam Mol Genet Metaboism 15; Review on behalf of Tracy Lester/Andrew WilkieCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Multiple congenital anomalies-hypotonia-seizures syndrome 3 615398
Publications
Eleanor Williams (Genomics England Curator)
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: PIGT; Initial rating suggestion: Green List (high evidence)Created: 6 Mar 2019, 11:36 a.m.
Sarah Leigh (Genomics England Curator)
Comment on list classification: 3 new variants in 2 families (PMID 28327575). A total of 6 variants have now been reported, this gene is also a confirmed G2P gene for Multiple congenital anomalies-hypotonia-seizures syndrome 3 615398Created: 4 May 2017, 12:49 p.m.
Comment when marking as ready: Associated with phenotypes in OMIM and with Multiple congenital anomalies-hypotonia-seizures syndrome 3 615398 in G2P. At least three variants reported in Multiple congenital anomalies-hypotonia-seizures syndrome 3 615398Created: 29 Jul 2016, 11:58 a.m.
Comment on phenotypes: At least one variant reported in Paroxysmal nocturnal hemoglobinuria 2 615399Created: 29 Jul 2016, 11:56 a.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 3Created: 17 Jun 2016, 8:07 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Multiple congenital anomalies-hypotonia-seizures syndrome 3 615398
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- NHS GMS
- Expert Review Green
- Expert list
- Phenotypes
-
- Multiple congenital anomalies-hypotonia-seizures syndrome 3 615398
- OMIM
- 610272
- Clinvar variants
- Variants in PIGT
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes, Set publications
Eleanor Williams (Genomics England Curator)Added phenotypes Multiple congenital anomalies-hypotonia-seizures syndrome 3 615398 for gene: PIGT Publications for gene PIGT were changed from 28327575 to 29868109; 28327575
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to PIGT. Rating Changed from Green List (high evidence) to Green List (high evidence)
Set publications
Sarah Leigh (Genomics England Curator)Publications for PIGT were set to 28327575
Set publications
Sarah Leigh (Genomics England Curator)Publications for PIGT were set to 28327575
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Set Mode of Inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for PIGT was changed to BIALLELIC, autosomal or pseudoautosomal
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for PIGT were set to Multiple congenital anomalies-hypotonia-seizures syndrome 3 615398
Upload gene information
Sarah Leigh (Genomics England Curator)PIGT was added to Unexplained skeletal dysplasiapanel. Sources: Expert list
Added New Source
Sarah Leigh (Genomics England Curator)PIGT was added to Unexplained skeletal dysplasiapanel. Sources:
Created
Sarah Leigh (Genomics England Curator)PIGT was created by sleigh