Skeletal dysplasia
Gene: PSAT1EnsemblGeneIds (GRCh38): ENSG00000135069
EnsemblGeneIds (GRCh37): ENSG00000135069
OMIM: 610936, Gene2Phenotype
PSAT1 is in 10 panels
4 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
>3 families reported. Clinical features include severe congenital malformations including abnormal craniofacial features, microcephaly, intrauterine growth retardation, ichthyosis, flexion deformities, limb malformations; Review on behalf of Tracy LesterCreated: 6 Mar 2019, 11:44 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Neu-Laxova syndrome 2 616038
Eleanor Williams (Genomics England Curator)
This gene was part of an initial gene list collated by Tracy Lester, Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust, February 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: PSAT1; Initial rating suggestion: green if SDCreated: 6 Mar 2019, 11:36 a.m.
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Associated with phenotypes in OMIM and G2P. At least three variants reported Neu-Laxova syndrome 2 616038Created: 29 Jul 2016, 1:26 p.m.
Comment on phenotypes: Variants also reported in Phosphoserine aminotransferase deficiency 610992Created: 29 Jul 2016, 1:25 p.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 3Created: 17 Jun 2016, 8:07 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
?Phosphoserine aminotransferase deficiency 610992; Neu-Laxova syndrome 2 616038
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- NHS GMS
- Expert Review Green
- Expert list
- Phenotypes
-
- Neu-Laxova syndrome 2 616038
- OMIM
- 610936
- Clinvar variants
- Variants in PSAT1
- Penetrance
- Complete
- Panels with this gene
History Filter Activity
Set Phenotypes
Eleanor Williams (Genomics England Curator)Added phenotypes Neu-Laxova syndrome 2 616038 for gene: PSAT1
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to PSAT1. Rating Changed from Green List (high evidence) to Green List (high evidence)
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for PSAT1 were set to Neu-Laxova syndrome 2 616038
Set Mode of Inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for PSAT1 was changed to BIALLELIC, autosomal or pseudoautosomal
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Upload gene information
Sarah Leigh (Genomics England Curator)PSAT1 was added to Unexplained skeletal dysplasiapanel. Sources: Expert list
Added New Source
Sarah Leigh (Genomics England Curator)PSAT1 was added to Unexplained skeletal dysplasiapanel. Sources:
Created
Sarah Leigh (Genomics England Curator)PSAT1 was created by sleigh