Skeletal dysplasia
Gene: SHHEnsemblGeneIds (GRCh38): ENSG00000164690
EnsemblGeneIds (GRCh37): ENSG00000164690
OMIM: 600725, Gene2Phenotype
SHH is in 17 panels
2 reviews
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Not associated with relevant phenotype on G2P or OMIM. Single variant reported in Preaxial polydactyly type 1Created: 12 Jul 2016, 1:02 p.m.
Comment on phenotypes: Variants in SHH associated with the following phenotypes, which are not relevant for Skeletal dysplasia: Holoprosencephaly 3 142945; Microphthalmia with coloboma 5 611638; Schizencephaly 269160; Single median maxillary central incisor 147250Created: 12 Jul 2016, 1:01 p.m.
Comment on publications: Report of 2 kb deletion located ~240 kb upstream from the SHH promoter.Created: 12 Jul 2016, 12:58 p.m.
Ana Beleza (Bristol Regional Genetics Service)
Tier 2Created: 17 Jun 2016, 8:08 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Petit F, et al. The disruption of a novel limb cis-regulatory element of SHH is associated with autosomal dominant preaxial polydactyly-hypertrichosis. Eur J Hum Genet. 2016 Jan 24(1), 37-43; Holoprosencephaly 3 142945; Microphthalmia with coloboma 5 611638; Schizencephaly 269160; Single median maxillary central incisor 147250
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Red
- Phenotypes
-
- Preaxial polydactyly type 1 (PPD1)
- OMIM
- 600725
- Clinvar variants
- Variants in SHH
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Structural eye disease
- Early onset or syndromic epilepsy
- Skeletal dysplasia
- Fetal anomalies
- Currarino triad
- Pituitary hormone deficiency
- Holoprosencephaly - NOT chromosomal
- Anophthalmia or microphthalmia
- Intellectual disability
- CAKUT
- VACTERL-like phenotypes
- Limb disorders
- Unexplained kidney failure in young people
- DDG2P
- Ocular coloboma
- Clefting
- Unexplained young onset end-stage renal disease - additional genes
History Filter Activity
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 9th August 2016
Set Mode of Inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for SHH was changed to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for SHH were set to Preaxial polydactyly type 1 (PPD1)
Set publications
Sarah Leigh (Genomics England Curator)Publications for SHH were set to 25782671
Added New Source
Sarah Leigh (Genomics England Curator)SHH was added to Unexplained skeletal dysplasiapanel. Sources:
Created
Sarah Leigh (Genomics England Curator)SHH was created by sleigh