Early onset or syndromic epilepsy
Gene: D2HGDHEnsemblGeneIds (GRCh38): ENSG00000180902
EnsemblGeneIds (GRCh37): ENSG00000180902
OMIM: 609186, Gene2Phenotype
D2HGDH is in 11 panels
3 reviews
Tracy Lester (Genetics laboratory, Oxford UK)
AR D-2 hydroxyglutaric aciduria - neurometabolic disorder characterised by dev delay, epilepsy, hypotonia and dysmorphic features. Severe pheno associated with EIEE, mild pheno - more variable. Struys et al, 2005 (incl patient from Gibson et al, 1993) - 2 unrelated patients - 1 hom for a missense variant, the other, compound het for missense and splice site, both patients were reported to have seizures. In addition another paper - 3 individuals from 2 unrelated pakistani families - hom variants detected. seizures reported in family 2 not family 1. Kranendijk et al, 2010 - identified presumed pathogenic variants in 24/50 patients with increased levels of D-2 hydroxyglutaric acid - no mention of clinical presentation.Created: 6 Aug 2019, 8:31 p.m. | Last Modified: 6 Aug 2019, 8:31 p.m.
Panel Version: 1.188
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
D-2-hydroxyglutaric aciduria, 600721
Publications
Rebecca Foulger (Genomics England curator)
Review and rating collated by Tracy Lester (Oxford Medical Genetics Laboratories Oxford University Hospitals NHS Foundation Trust, 2019_02_06) on behalf of Wessex and West Midlands GLH for GMS Neurology specialist test group, for Clinical Indication R59 'Early onset or syndromic epilepsy'. Review contributors: John Taylor and Helen Lord. Suggested gene rating: Green.Created: 6 Aug 2019, 8:38 p.m. | Last Modified: 6 Aug 2019, 8:38 p.m.
Panel Version: 1.189
Comment on list classification: Updated rating from Amber to Green. Green review, and as Zornitza reports, epilepsy is a phenotype of D-2-hydroxyglutaric aciduria. Sufficient unrelated epileptic cases from the literature (2 from PMID:15609246 and 1 from PMID:16037974) to support a diagnostic rating.Created: 20 Nov 2018, 1:46 p.m.
Struys et al 2005 (PMID:15609246) report two unrelated patients affected with severe D-2-hydroxyglutaric aciduria and disease-causing variants in D2HGDH. Patient one suffered tonic, tonic-clonic, and myoclonic seizures, and was homozygous for missense variant in D2HGDH (c.1331T-->C; p.Val444Ala). Patient 2 presented with generalized tonic-clonic seizures and infantile spasms amongst her symptoms. She was compound heterozygous for a missense mutation (c.440T-->G; p.Ile147Ser) and a splice-site mutation (IVS1-23A-->G) that resulted in a null allele.Created: 20 Nov 2018, 1:42 p.m.
Struys et al. (2005, PMID:16037974) examined 3 patients from 2 unrelated consanguineous Palestinian families with mild D-2-hydroxyglutaric aciduria and homozygous variants in D2HGDH. In family 1, the two affected siblings were clinically asymptomatic and had the homozygous IVS4‐2A>G variant. Patient C (Family 2) is the only affected member of his family, and at age 8 years he developed absence seizures with myoclonic jerks amongst his symptoms. He had a Homozygous Asn439Asp variant in D2HGDH.Created: 20 Nov 2018, 1:38 p.m.
Zornitza Stark (Australian Genomics)
Seizures are a common feature of this metabolic disorder.Created: 12 Aug 2018, 6:06 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
D-2-hydroxyglutaric aciduria, MIM#600721
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Wessex and West Midlands GLH
- NHS GMS
- Expert Review Green
- Victorian Clinical Genetics Services
- Phenotypes
-
- D-2-hydroxyglutaric aciduria, 600721
- generalized tonic-clonic seizures
- absence seizures
- tonic seizures
- tonic-clonic seizures
- myoclonic seizures
- OMIM
- 609186
- Clinvar variants
- Variants in D2HGDH
- Penetrance
- None
- Panels with this gene
-
- Childhood onset dystonia, chorea or related movement disorder
- Likely inborn error of metabolism
- White matter disorders and cerebral calcification - narrow panel
- Mitochondrial disorders
- Early onset or syndromic epilepsy
- Possible mitochondrial disorder - nuclear genes
- DDG2P
- Intellectual disability
- Inherited white matter disorders
- Fetal anomalies
- Undiagnosed metabolic disorders
History Filter Activity
Added New Source
Rebecca Foulger (Genomics England curator)Source Wessex and West Midlands GLH was added to D2HGDH.
Added New Source
Rebecca Foulger (Genomics England curator)Source NHS GMS was added to D2HGDH.
Panel promoted to version 1.0
Sarah Leigh (Genomics England Curator)Zornitza Stark: Seizures are a common feature
Entity classified by Genomics England curator
Rebecca Foulger (Genomics England curator)Gene: d2hgdh has been classified as Green List (High Evidence).
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for gene: D2HGDH were changed from D-2-hydroxyglutaric aciduria, 600721; generalized tonic-clonic seizures; absence seizures; tonic seizures; tonic-clonic seizures; myoclonic seizures, to D-2-hydroxyglutaric aciduria, 600721; generalized tonic-clonic seizures; absence seizures; tonic seizures; tonic-clonic seizures; myoclonic seizures
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for gene: D2HGDH were changed from D-2-hydroxyglutaric aciduria, 600721 to D-2-hydroxyglutaric aciduria, 600721; generalized tonic-clonic seizures; absence seizures; tonic seizures; tonic-clonic seizures; myoclonic seizures,
Entity classified by Genomics England curator
Rebecca Foulger (Genomics England curator)Gene: d2hgdh has been classified as Green List (High Evidence).
Set mode of inheritance
Rebecca Foulger (Genomics England curator)Mode of inheritance for gene: D2HGDH was changed from to BIALLELIC, autosomal or pseudoautosomal
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for gene: D2HGDH were changed from to D-2-hydroxyglutaric aciduria, 600721
Added New Source
Sarah Leigh (Genomics England Curator)Expert Review Amber was added to D2HGDH. Panel: Genetic Epilepsy Syndromes
Added New Source
Sarah Leigh (Genomics England Curator)D2HGDH was added to Genetic Epilepsy Syndromes panel. Sources: Victorian Clinical Genetics Services
Created
Sarah Leigh (Genomics England Curator)D2HGDH was created by Sarah Leigh